Selaginella moellendorffii: SELMODRAFT_128575
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Entry
SELMODRAFT_128575 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K16474
intraflagellar transport protein 88
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smo03037
]
SELMODRAFT_128575
Cilium and associated proteins [BR:
smo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
SELMODRAFT_128575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_12
TPR_8
TPR_6
TPR_7
TPR_11
TPR_9
TPR_17
ANAPC3
TPR_10
ARM_TT21_5th
TPR-S
TPR_CcmH_CycH
TPR_Slam
HAT_PRP39_C
HemY_N
NTS_TR130
ANKH
TPR_21
Motif
Other DBs
NCBI-GeneID:
9660832
NCBI-ProteinID:
XP_002988775
JGI:
128575
UniProt:
D8SZJ0
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
RPMTAVRAAGYTSRGTKFDPLNQGARLTNAQKRDELNPEYQVRELESQVNQMLEESATAS
FLGQYATALEKAKEAGKRERMLCKHREQTGLADQVNTELTFAVCFNLGYQYEMNRLHSEA
LNTYSQIVKSKQFPQGGRLRVNMGNIYYEQEKYALAVKMYRMALDQTPNSYKDTRYKIMR
NIGISLMRTGHYQDAVQSFESLIDITVDHHAAYNLLVSHYVLGNCSKMRSCFTKMLLVKH
YDPERDDDIEPDHTAVFRVGPFPLDELRQELHARQNQANRLILTSARIIAPVVGNSLVEG
YDWVIELLQDQQYVTLAHEMEMDKALQHLHQRDFQQAIALLKEFERKERDLQARAATNLS
FLYFLEGDLANAEKHAELAVLNNRFNACALVNQGNCYFMRGDPERAKQVYKGAADVDPDC
VEALYNLGLAYKKLNSFEEALSVFKKISYVLPNNTEVLFQIGQVSDVMGNSRQAIKWLEL
LVSKVMHDAGLLAMLGNLYVRCEDDAKALHYFSESHRVCPTDVVVTAWLGSFYLQNELYE
KAMPFFQLASRIHPEEVVKWKLKVALCLRRTGSFSKALHKYKQILSAHPDNAECLRCLVH
LCTSLGRKMEVQAYESKLWKVDQDHQRQTGSTMACFGQRPRRVGYDSVKSSGKARDEDWE
LTDDLLPI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
agacccatgacggctgtaagggcagctggctatacctccagaggtaccaagttcgatcct
ttgaatcaaggtgcacgtttaacaaacgcgcagaaaagggacgaactcaatcctgaatat
caggttcgcgagctggagagtcaggtcaatcagatgctggaggaaagtgccactgccagc
tttctgggtcaatatgccactgctctggagaaagctaaagaagctggaaaacgcgaaagg
atgctctgcaaacatcgagagcagacgggcttggctgatcaagtgaataccgagctgact
ttcgctgtctgttttaatctaggatatcaatatgaaatgaatcgtttacactcggaagcg
ttgaatacctattcacaaatcgtgaagagcaagcaatttccacagggtggaagattaaga
gtaaatatggggaacatttactatgaacaagagaaatatgcacttgcagtaaaaatgtat
cgcatggcccttgatcagactcccaattcgtacaaagatacgcgatacaagatcatgcgc
aatattggcatctctttgatgcggactggccactaccaggatgctgttcagtcatttgaa
tcattgatagacatcacggtcgaccatcacgcggcttacaatcttctagtttcccattat
gttttgggaaattgttccaaaatgagaagctgctttacaaaaatgctcttagtgaaacac
tatgatccagagcgtgacgatgacattgagcccgatcatacggccgtgtttcgggtgggt
ccgtttccactggacgagttgcggcaggagctacatgcaagacaaaatcaggcaaacagg
ctcatactaacatctgcgagaattattgctcctgttgttggaaattctttggtagagggt
tatgattgggtcatcgagttgctacaagaccagcaatatgtgacccttgcacacgaaatg
gaaatggataaagcccttcaacacctacatcaaagagactttcaacaagccatagcattg
ctaaaagaattcgaacgaaaagaaagagatttgcaagcacgagcagcaacaaatctgtct
ttcttatatttcttggagggtgatctggcaaacgcggagaaacacgcggagcttgctgtt
ttaaataatcggttcaacgcttgcgccctagtcaaccaaggaaactgttactttatgagg
ggcgatcctgagcgcgcaaagcaagtctataaaggcgctgcagacgtggaccctgattgc
gtggaggcactttataacctgggccttgcatataagaaactaaattcttttgaggaagca
ttgagcgtattcaagaaaataagttacgttcttccgaataataccgaagtattgtttcag
attggacaagtgagtgacgttatgggaaactctcgacaagcaataaagtggctagagctc
ttggtctcgaaagtgatgcatgatgcaggccttctagctatgctgggaaacctctacgtg
cgctgtgaagatgatgcaaaggctcttcactacttcagcgagtcgcacagagtgtgtcca
acggatgtggttgtcactgcgtggttggggtctttttatctgcagaacgagttgtacgag
aaagcaatgcctttcttccaactagcgtcacggattcatcctgaagaggtagtgaagtgg
aagctaaaggtggcgctgtgcttacgacgaacgggttcattttcaaaggcacttcacaaa
tacaagcaaattcttagcgcacacccagacaatgcagagtgcttgcgctgtttggtgcac
ctttgcacaagtcttggcaggaaaatggaagtccaggcttatgagagcaaactgtggaag
gtggatcaggatcatcagaggcagacgggcagcaccatggcttgttttgggcaacgccca
cgacgagttgggtacgacagtgtcaagtcctctggaaaagccagggacgaagattgggag
cttacggatgacttactcccgatctga
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integrated database retrieval system
