Selaginella moellendorffii: SELMODRAFT_129540
Help
Entry
SELMODRAFT_129540 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_129540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_129540
04147 Exosome [BR:
smo04147
]
SELMODRAFT_129540
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_129540
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_129540
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_129540
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_129540
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_129540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_25
RsgA_GTPase
APS_kinase
AAA_5
AAA_21
AAA_7
FB_lectin
DLIC
Motif
Other DBs
NCBI-GeneID:
9650013
NCBI-ProteinID:
XP_002989240
JGI:
129540
UniProt:
D8T0Z2
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MQVSFRKLFKYADGLDCLLMATGSLAAIAHGLVLPINMYYFGRIVNALATNQSDRDAAGS
AVLKFAIAMFIVALNSGWVTWLAEVWCWLYTGERQSSRIRVRYLESLLHQEVAFFDTEAN
TGSIVNHIASDILLVQDAMGEKVGGFIHNMATFIGGVVVALFNGWQIALLAIATVPLLAG
TGAVYTRLYTAMFTRSQASHAQASSIAEQTISQIRTVYSFVQESRALTSFSDALQAARKV
GERGGLIRGMGLGLTLGIVNCSWALELWCGSILVSKGHIDGGKILTAVFCIVFGGMALGQ
TTPELQVFSRGRVAAYNIFNIIDRASKIDSRNIEGEVPENLDGYIEFDDIHFRYPARPDV
TIFQGLSLEVPAGSSVALVGESGSGKSTVISLLQRFYNPISGEIRLDGRNIAHLQLKWLR
KNIGVVAQEPVLFATSIKENIRLGKIDATDEEIEAAATASNAIGFIMQLPERFETQVGYS
TAQLSGGQKQRIALARMIVKNPTILLLDEATSALDIESEHKVKDALDAVMVNRTAITVAH
RLSTIQNAKKIAVFSKGKVIELGTHEQLLEKEGAYATLVRLQERNKDNHEHCLLVVTRPE
TYFQPSSLSPYRPSLDRTGNSPLLSQEPKKQQSEIELRRWSSLWQLCKLAGRNWLELSTG
SVAALVTGCINPLFALFLIEVVQLYYQPGSMHKVNRWCAIITALGATAICTNIFQHYLYA
KAAESISQKLEEHAFTAILENEIEWFDKEENTSNALTAQLSSNASSVRTAMSDRVCLLLQ
YTTSICLAMALGFRIKWEMAIITIATFPFSMVGGSMKQGFLQKGFAGDLEKLHAKASNVA
GEAVSNIRTLASFCAEAKILGVFKDQLSQPLKQSFMRAQKGGILFGLSQCGLHLANATGL
WYVSLLVKKGRSNYADALKVFQILAWTGYVLAEALNLFPDITKALHSVACLQKITRRKTQ
MRPDEPHSRKPDDILGEVEFIEVDFSYPSRPLVPVLSKFNLHMRAGMTVALVGSSGSGKS
SVIQLVMRFYDPTAGRVLLDGHNLRNYNLRWLRKHISLVNQEPSLFSTSIRSNITYGKDN
ATEEETIAAARIANAHGFISSLPQGYETSVGERGVQLSGGQKQRIAIARAVIKDPAILML
DEATSALDSESERAVQQALDEILERRNRTTLVIAHRLSTVRHAHAIAVLQQGRIVELGSH
DHLMADPRGAYARMIQEG
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctctttccggaagctcttcaagtatgccgatggcctcgattgcttgctcatg
gcaaccggaagcttggcagccatcgcgcacggcctcgttcttccgatcaacatgtactac
tttggccggatcgtcaatgctctcgccacaaatcagagtgacagggatgcggcgggatcg
gctgtgttgaaattcgcgatcgctatgtttatcgtggcgctcaattctggatgggtcact
tggctagcagaagtttggtgttggctgtacacgggggagcgacagtcgagccggatccga
gtgagatacctggagtcactgctgcaccaagaggttgcgttcttcgatactgaagcaaac
acgggaagcatcgttaatcacatagccagtgatatacttctagttcaagatgcgatgggc
gagaaggttggtggattcatacacaacatggcgactttcatcggcggagtcgtagtggcg
cttttcaatggctggcaaatagcactcctggcgattgctacggtaccactgcttgccgga
actggggccgtgtacacccggttgtacaccgcaatgtttacacggagccaggcgtcgcat
gctcaagcaagctccattgccgagcagacaatatcacagatcagaacggtctactctttc
gttcaagagtctcgtgctctcacctccttctctgatgcgctgcaagccgctaggaaagtc
ggggaaagaggcgggttgatccgagggatgggacttggacttacgcttggaattgtcaac
tgttcttgggcattggagctctggtgcggtagcattctcgtctccaaaggacacatcgac
ggagggaagattctgactgcggtgttttgcatcgtctttggtggcatggcccttggacag
acaactccagagttgcaggtgttctcgagaggcagagtagcagcttacaacatcttcaat
atcatcgaccgtgcgtcaaagatcgacagcagaaatattgaaggcgaggtccctgaaaat
ctggatggatatatcgagttcgatgatatccacttccgctatccagcacgcccggacgtt
acaatatttcaaggcttgtcccttgaagtacccgctggaagttctgtggcgttggtcggt
gaaagcggctcagggaagagcacagtaatctctcttcttcagcgattctacaatccaatt
tcaggagaaatacgactagatggaaggaatatagcgcacctacaactcaaatggttgaga
aagaacattggcgtggtagcacaagaacccgtcctgtttgccaccagcataaaagaaaac
atcagacttggaaagatagatgcaactgatgaagaaattgaagctgctgctacagcatca
aatgcaatcggatttatcatgcagctgcctgaacgttttgagactcaggttggatatagt
actgcgcagctctctggcggtcaaaagcaacgaattgcattagcgaggatgatcgttaag
aatcctaccattttgctgctcgacgaagcaacaagtgcactggatatcgaatcggagcat
aaggtgaaggacgctcttgacgctgtcatggtgaatcgcacggcgataactgttgcacac
cgactgtccacgattcagaacgccaagaaaattgcagttttctcaaaaggcaaggtgatt
gagcttggaactcacgagcagcttcttgaaaaggaaggagcatatgctacactggtgcgt
ctacaagaaaggaacaaggacaaccatgaacactgcttacttgtggtgaccaggccagag
acgtattttcaaccttcgagcttgtctccctacagaccttctctagaccgcacaggcaac
tccccgcttctttcacaggaaccaaaaaagcaacagtccgaaattgagctgcgtcgctgg
agttcgctgtggcaactttgtaagttggcggggagaaactggcttgagttatcaacgggc
agtgtagcagctctggttacaggctgcatcaatccgctattcgctcttttcctcatcgag
gtagtccaactttactaccagcccgggtccatgcacaaagtgaacagatggtgcgcaatt
atcactgcgctgggagctactgccatctgcacgaacatttttcagcattatttatatgct
aaggcagcggaaagcatcagtcaaaaactcgaagaacatgcttttacagccattttggag
aacgaaatagagtggtttgacaaggaagaaaatacaagcaatgcactcacggctcaactt
tcctcgaatgcatcaagcgtccgaacagcaatgagtgacagggtgtgcttgctacttcaa
tacaccacatcaatctgcttggctatggcactcgggttcagaataaaatgggaaatggca
ataataaccattgctacgtttccgttttcaatggtcggcgggtcaatgaagcaaggattc
ctgcaaaaaggcttcgcaggagacctggaaaagctacatgcaaaagcaagcaacgtcgct
ggcgaagcagtcagcaacataagaactctagcatcattctgcgctgaagccaagatcctc
ggtgtgttcaaggaccagttgagtcagcccctcaagcagagcttcatgcgtgctcagaaa
ggtggcatcctcttcggactctcgcaatgtggactccaccttgcaaatgcaaccggactc
tggtacgtctcgctgctagtcaaaaaaggacgcagcaactatgcggacgctctcaaggtc
tttcagatactggcatggacaggctacgttctcgcagaggctctcaatctcttcccagac
atcaccaaggcacttcactcagtcgcttgcttacagaaaatcaccagaagaaagacacaa
atgagaccagatgaaccacacagcaggaagccagacgacatactcggagaagtcgagttc
atcgaagtcgactttagctatcccagcagaccactggtaccagtactctcaaagtttaat
cttcacatgagagccggaatgactgtcgcgctggtaggctcgagcggatcaggcaagagc
tcagtcatccagctagtgatgagattctacgacccaaccgctggacgcgtgcttctagac
ggccacaacctcaggaactacaacttacgatggctcaggaagcacataagcctcgtcaac
caggaaccatctctcttctcgacaagcatacgatcaaacatcacatacgggaaagacaat
gcaacggaagaagagacaatcgcagcagccaggatcgcaaatgctcacgggtttatcagc
agcttacctcaaggctacgaaacgagcgttggagagcgcggcgtccagctctcgggaggg
caaaagcagagaatcgccatcgccagggccgtgatcaaggatccagcaattcttatgctg
gacgaggcgacgagcgcgctggactcggaatctgagagagccgtgcagcaagctttagac
gagatcctggagaggaggaatcgcacaaccctagtgatcgctcaccgattgtccaccgtg
cggcatgcgcacgccatcgccgtgctccagcagggccgaatcgtggagctgggcagccac
gaccacctcatggcggatccgcgcggcgcctacgcccggatgatccaagagggctaa
DBGET
integrated database retrieval system
