Selaginella moellendorffii: SELMODRAFT_129910
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Entry
SELMODRAFT_129910 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13217
pre-mRNA-processing factor 39
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_129910
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SELMODRAFT_129910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
9636396
NCBI-ProteinID:
XP_002989521
JGI:
129910
UniProt:
D8T1W4
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
SNEEERLWGIVNANPADFNSWTQLIQETEKLVPFVSSFLFQDDIVKFRQCYDTFLAEFPL
CYGYWKKYADHENRLATPEKTIEVYERAVKAVTHSVDIWVHYCSFVSAAKPEDPEALRRL
FERGLSHVGTDYLAHQLWDKYIDFEYSHSNWVGITQLYTRILQIALQALDRYFSHFKELA
NNRPIAELKGPEDSAEADNTVPEQIDKAGADETAEAPKDPEVERFIRRREELYKSTKEWD
AKVREYETAIRRPYFHVKPLDDLQLLNWHRYLDFLEKEGDFDKIVKAYERCVIACANYPE
YWIRYIHTMEAKSRSEIADDALDRALHIFVKRRPEIHIYAARFKERREDAAGARKEYSVL
SSEIAPGLLEVISKHANFEKRQGNIDGACAIYESALEVEKAKEESRVLSFLYIQYIRFLS
EVRTSDAFLSDSILALALEKLPNSKVILEAAIHFETLSPEKDIPKLEAIIERAILSSGSD
AALQSSDREEISSLFLEFLDSYGTVEDCKRAELRHRQAFLYSRSSDSKKRSSLDSAVSDR
SKLVKTGSNAVAGYTNGQAQWSYQNWQQPQQQWNQAYPVRTFWFQCHASYKS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
agcaacgaggaagagaggctgtggggcatcgtgaatgccaatccagcggactttaattca
tggacgcagctgattcaagagactgagaagctcgtgcctttcgtttcttcttttctcttc
caggatgatatagtcaagtttcgccagtgctatgatacgttcctggccgagtttcctctg
tgctatggctactggaaaaaatacgcggaccatgagaaccggctggcaacgcccgagaag
accatcgaggtttacgagagggctgtgaaagccgtgacgcactcagtcgacatatgggtg
cactactgctcctttgtttcggcggccaagcccgaagatccagaagcgctgaggaggttg
tttgagcgtggactctcgcacgtcggcaccgactacctggcgcatcagctttgggacaag
tacattgattttgagtattctcattcgaactgggtaggcatcactcagttgtatacacgg
attttacagatagcccttcaagctttggatcgctacttctcacacttcaaggagttagcc
aacaatcgacccatagcggaactgaaaggtcctgaagatagcgcagaagccgataatact
gttcccgagcaaatagataaagcaggagctgatgaaactgcagaagccccaaaggatcca
gaagttgaaaggtttattagaagaagagaggagctatataaatcgacgaaggagtgggat
gcaaaagttcgagagtatgaaaccgctataagaaggccgtattttcatgtcaagcctcta
gatgacttgcaactactcaactggcatcgctacctggattttctggaaaaagaaggtgac
tttgacaagatagtgaaggcatacgagagatgtgtgatcgcctgtgcaaattatccggag
tattggattcgctatattcatacaatggaagcaaaatctcgatctgagatagctgatgat
gctttggatcgcgcactacacatttttgtcaagagacgacccgagatacatatctacgct
gctagatttaaagaacgcagggaagatgctgcaggcgctcgaaaagagtatagcgttctc
agctctgaaatagctcccgggcttcttgaggttatttctaagcacgcaaattttgagaaa
agacaggggaatattgacggcgcttgtgccatctatgaatctgctttggaagtggaaaaa
gcgaaggaggaatcgagagttttgtctttcttgtatattcaatatatccggttcctttct
gaggtgagaacttctgatgctttcctttctgacagtatcttggcccttgcattggagaaa
ctaccgaactccaaagttatcttggaggctgcgatccattttgagactctctctcccgag
aaggacataccaaaactcgaggctatcattgaacgtgctatactcagcagcggctcggac
gctgctttgcaatcatctgatcgtgaggagatatcgagtttatttcttgagtttctggat
tcttatgggactgtagaagactgtaagagggctgagctgcggcatcgacaggcattcttg
tactcgaggtccagcgattccaagaagcgctcgtcactggacagcgccgtctctgatcgg
agcaagctcgtcaagaccggttccaacgccgtcgctggttataccaatggacaagcgcag
tggagctaccaaaactggcagcaacctcaacaacaatggaaccaagcatacccggtaaga
acgttttggtttcaatgtcacgcatcttacaaatcatag
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integrated database retrieval system
