Selaginella moellendorffii: SELMODRAFT_129972
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Entry
SELMODRAFT_129972 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00541
Biosynthesis of various nucleotide sugars
smo01100
Metabolic pathways
smo01250
Biosynthesis of nucleotide sugars
Module
smo_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SELMODRAFT_129972
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
SELMODRAFT_129972
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
NmrA
Methyltransf_2
DUF4942
Motif
Other DBs
NCBI-GeneID:
9651425
NCBI-ProteinID:
XP_002989472
JGI:
129972
UniProt:
D8T1K5
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MTAGADRCNGDSHYTPRNILITGAAGFIASHVANRLVRSYPGYKIVVLDKLDYCSNLKNL
YQSKESANFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSLEFTKNNIYG
THVLLEACKVAGTIRRFIHVSTDEVYGETEADAIVGNHEASQLLPTNPYSATKAGAEMLV
MAYGRSYGLPFITTRGNNVYGPNQFPEKLIPKFILLAMQGRPLPIHGDGSNVRSYLYAED
VAEAFEVVLHKGEVGHVYNIGTKKERRVLDVAKDICKLFKLDPEVCIQFVDNRPFNDQRY
FLDDKKLKDLGWRERTTWDEGLLKTMQWYTSHPNWWGDVSGALVPHPRMLTMTGEKLSHE
DEESTGPVVGNIGMIVPQKVSPLKPAMKLLIYGRTGWIGGLLGKICEREGIPYEYGSGRL
ENRLQLEADILTVKPTHIFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCKQHGL
LLMNFATGCIFEYDDSHPINSGIGFLEDDKPNFTGSFYSKTKAMVEELLKCYDNVCTLRV
RMPISSDLSNPRNFITKITRYEKVVDIPNSMTVLDELLPLSIEMARRNCTGIWNFTNPGT
VSHNEVLEMYREYIDQGFKWSNFTLEEQAKVIVAPRSNNELDTKKMEKEFPQLMHIKDSL
VKLVFVPNSSNGDKK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacggccggcgcggatcggtgcaatggcgactcccactacacgccgcgcaacatcctc
atcaccggcgccgcgggcttcatcgcttctcacgtcgccaacaggctggtccggagctac
ccgggctacaagatcgtggttctggacaagcttgactactgctccaacctcaagaacctt
taccagtccaaggagagcgccaacttcaagttcgtcaagggcgacatcgcgagcgcggat
ctcgtgaactacctgctgatcaccgaggggatcgacaccatcatgcacttcgcggcgcag
acccacgtcgacaactcgttcggcaacagcctcgagttcactaagaacaacatctacggc
actcacgtcctgctcgaagcgtgcaaggttgccggcaccatccgccgcttcattcacgtg
agcacggacgaggtgtatggcgagaccgaggccgacgccattgtgggcaaccacgaggcg
tcacagctgctgcccacgaatccttactcggcgaccaaggctggagccgagatgctggtc
atggcttacggcagatcttacggcctccccttcatcaccacacgggggaacaacgtctat
ggccccaaccagttcccggagaagctcattccaaagttcatcctcctggcgatgcaaggc
cggccgcttcccatccacggcgacgggagcaacgttcgcagctatctctatgctgaggac
gtggccgaggcctttgaggtggtgcttcacaagggagaggttggtcacgtatacaacatt
gggacgaagaaggagcggcgggtgctggacgttgccaaggacatctgcaagctcttcaag
ctggacccggaggtgtgcatccagttcgtggacaaccggcccttcaatgaccagcgctac
ttcctggacgacaagaagctcaaggacctcgggtggcgcgagaggaccacctgggacgag
gggctgctcaagacgatgcagtggtacacgagtcacccgaactggtggggtgacgtttct
ggcgcgctggtcccgcatcccaggatgctcaccatgaccggggagaagctgtcccacgag
gacgaggagtctaccggacctgtggtggggaacatcgggatgattgttccacaaaaggtc
tcgcctctcaagccggcgatgaagctactgatatacgggcggacaggctggattggtgga
ctcctgggaaagatctgcgagagagaagggatcccgtacgagtatggatccggcaggctc
gagaatcggttgcagctcgaggcggacatcttgacagtgaagcctacacacattttcaac
gcagcaggtgtgacgggtcggcctaatgtggactggtgcgagagccacaaggtggagact
atcagagccaacgttgtcggcacactgaccctggccgacgtgtgcaagcagcacggattg
ctgctcatgaactttgcgacgggctgcattttcgagtacgatgacagccaccccatcaac
agcggcatcgggttcctggaggatgacaagcccaactttacgggctccttctactcaaag
actaaagcaatggtggaggagctcctgaaatgctacgacaacgtatgcacgctgcgcgtg
aggatgcccatctcgtccgacttgagcaacccgcgcaacttcatcaccaagatcacgcgg
tacgagaaagtggtagacatccccaacagcatgacggtgctggacgagctgctgccgctg
agcatcgagatggcccggcgcaactgcacgggcatctggaacttcacgaacccgggcacg
gtgtcgcacaacgaggtcctggagatgtaccgcgagtacatcgaccagggattcaagtgg
tccaacttcacgctggaggagcaggccaaggtgatcgtggcgccgcgcagcaacaacgag
ctcgacaccaagaagatggagaaggagttcccgcagctcatgcacatcaaggactcgctc
gtcaagctcgtcttcgtcccaaacagcagcaacggggacaagaagtga
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