Selaginella moellendorffii: SELMODRAFT_132245
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Entry
SELMODRAFT_132245 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_132245
Enzymes [BR:
smo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SELMODRAFT_132245
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SELMODRAFT_132245
Prokaryotic type
SELMODRAFT_132245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
9658522
NCBI-ProteinID:
XP_002990715
JGI:
132245
UniProt:
D8T562
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MEKAALFVVYCGAGYKGMQRNPGALTIEGVLEEALGRAGAIGSNGCSRNWLDWKRAARTD
KEVSALGQVVSARLYLTPDLVHRTNEFLPGSIQLLGFKRVPDDFSAKKMCDSRRYEYVLP
VFAFDPRTGDDLEEEFLFDFERFNQILGRFLGTDHSFHNFSWRVRPGDREARRTVVEFRA
ADKIWIGGSEFVRIIVLARSFMAYQIRKMVGLAVAVMRDIAPVTTINRALRSEVDVIVPT
APEVGLLLDESFYHDYNAAASTPEESRIALGLEFGEAMQEFKSKVIYAHIAHREREQGIV
AKWLPSLNAKNYSALSIC
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggctgccctgttcgtggtctactgcggcgcgggctacaagggaatgcagcgc
aatcctggcgccttgacgatcgagggagtgttagaggaggccctggggcgagctggggcg
atcggatcaaatgggtgctccaggaactggctggattggaagcgcgccgcaagaactgac
aaggaagtgagcgccctagggcaagttgtgtcggccaggctctacctcacccccgatctc
gtccatcgcaccaacgagttcctcccaggatccatccagctgctgggattcaagcgcgtc
ccggacgatttcagcgccaagaagatgtgcgattcgcggcgctacgagtatgtgcttcca
gtctttgcgtttgatccgcggactggggatgatctggaggaggaattcttgtttgatttc
gagcgattcaaccagatcttgggacgattcctggggaccgatcacagtttccacaatttc
tcgtggcgcgtccggccgggcgaccgcgaggcgcggcggacagtggtggaatttcgagcg
gcggacaagatctggattggagggagcgagtttgtgaggatcatcgtgcttgcccggagc
ttcatggcataccagatcaggaagatggtgggattggcagtggcggtgatgcgagacatc
gctccagtcacgacgatcaatcgggcgctaaggagcgaagtggatgtgatcgtccccact
gctccggaggtggggcttttgctggacgaatccttctaccacgactacaacgcagcggcg
tccacgcccgaggaatcgaggatcgctctggggctggaatttggggaggcgatgcaggaa
ttcaagagcaaggtgatctacgcgcacattgctcatcgcgagcgcgagcagggcatcgtt
gccaaatggttaccctctctcaatgccaaaaactactcggctctgagcatatgctag
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