Selaginella moellendorffii: SELMODRAFT_134482
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Entry
SELMODRAFT_134482 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11373
elongator complex protein 1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_134482
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SELMODRAFT_134482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
ANAPC4_WD40
TPR_GEMI5
Beta-prop_IFT140_1st
Beta-prop_HPS5
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-GeneID:
9645218
NCBI-ProteinID:
XP_002991968
JGI:
134482
UniProt:
D8T8R3
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MSVQSEIFCQSWIVFFVLDQLSRHSLSLASAIEFDAGVVGMEFLLELEALVIGMESGDLV
LVEPRSSSAIEVIGSLQGGILSLAASPDGELLAIVSGLGQILLMTPANWDTVHEFSIKNN
DRQEFSSSAVELSWRADGKYFATSEYNAQESSSVVKIWERETGKLHSSCEALPSTHRSSI
CWSPSGARIAASTSKADQAPSVTIFERNGLKKDYFQVTAPAGARVESLQWDSSGEVMKMV
VRCDGWDAIQFWYCSNYHWYLKQEWRYTSKETVSTVWHPEKPLSAMVWTVLGNIKATTLG
WKSAVLDSSVALVIDGPSLLVTPLAVCMTPPPLYFSKVRFPAPVNTVTLTSESSGFTTVA
ASLSDKSFGLAVLATSDGWNDLEDSEVVGYILQNFDGGVRNLISTGANRFCGLLDSSSGH
GSLQFTEFEATDSGEGWTSRSLSLVYLDKPLIAAARSPLTESSQAFLQLNDGSILNHCAG
ELTPVGKFPVACPWMQAFEDKGQVQFVGLDERGQLHFRNSVISSECTGFALHITSTKARP
SVVHLVYTTRQDLLHIIPLGSSNFTSSPPEVLDVGSGKRQPAPKDFNIQRVWERGARIVS
TLGGSDVAVIMQPSRGNLETIYPRGLILHAVEAALAEQDFAEAITCARRHRIDLNVIVDF
LGEKEFSRLAPDFVKQVGKLSLVTELVSCLGNENVLETTYKKTLSTLNPEDRMVPAVSSN
KMQVVLEALRSAVENHVTDSPSREMCLLTILARNDPPLLEEALKRIKLLREGELGLGTSD
DEEALEAIESQGKLVAESALKHLIWLADADAVFDAALGLYDLHLAAMVASHSQRDPKEFL
PFLQELEDMPPSIMCYKIDCKLKRYASALRHLSSAGETYFNEALDHVQSHPELFSLALSI
FTGESQRSSIMEAWGEYFLSQERFEDAAITFRSCSQLHKALAAYRAGGHWQGVLMVAGQL
SMTPDEITNLALELREELQAMGQPKEAARVALDYCKDVKDAVGLLIEARDWMEVLRLCYL
HAQPDIVDTIVQPAAVECANGLVGQFQEGVEKVGKYCARFVAVHQRRVLLEAKIKSDQGE
DRFDDDTASEASSNLSGMSVYTRGTARTAATGRTRARRQGKVRAGSPGEELALVEHLKNM
AISPQLADELRPLLQILVFVKREDLSCKLQQAASKFQATQAEAMRAVEENGITVDKTAAN
RVVNWSYQALERVL
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcaatccgaaatattttgccaatcgtggatcgtcttcttcgttcttgatcag
ctctcgcggcattcgctgtccctggcgagtgccatcgagttcgacgccggcgtggtcggg
atggaattcctgctggagctggaagcgctggtcattggcatggagagcggtgatctggta
ctggttgagccacggtctagcagcgccatagaagttattggctcgctccagggagggatt
cttagtctcgctgctagtccggatggggaactgttagctatagtatcaggactcgggcag
atcttactcatgactccagcaaactgggacactgtccacgagttttcgatcaaaaacaac
gatcgccaggaattttctagtagcgctgtggaactctcgtggcgggctgacgggaagtac
tttgctacaagcgaatacaatgctcaagaaagcagcagtgtcgtgaagatctgggaaaga
gaaacgggcaaactccattcgagctgtgaagcattgccatcgacgcatcgctcgagcatc
tgctggagtccgagtggtgctcgaattgctgccagcacttccaaggcagaccaggctccc
agtgtgacgatcttcgagcggaatggtctgaaaaaagattatttccaggttactgctcct
gccggtgctcgtgtagaaagtctgcagtgggattccagcggagaagtcatgaagatggtt
gtcaggtgtgatggctgggacgcgatccagttctggtactgcagcaactatcactggtac
ttgaaacaggaatggcgctacacgtccaaagagaccgtgagcacagtgtggcacccagag
aagcctctcagtgccatggtttggactgtcttgggcaacatcaaagctaccactttgggt
tggaagtcggctgtgctggactcttcggtggcgctggttattgatggcccgagtcttttg
gtcacaccattggctgtctgtatgactccgccacctttgtacttctccaaggtacgattc
cccgcacctgtgaataccgtgacacttacgagcgagtcttctggttttaccaccgttgca
gccagtttatcagacaaaagttttggccttgctgttctcgcaactagtgacggctggaat
gatctggaagacagtgaagttgtgggatacatattgcagaacttcgatggtggtgtgagg
aacctgatttctacgggagcgaacaggttttgtggactcctagacagctcgagcggtcac
ggttcgttacagtttactgagttcgaggctacagattctggagaaggatggacttcgcgt
tctctttctctagtctatttggacaagccgctcatagcagcggcgagaagtccccttaca
gagagctcgcaggcttttctacagctaaatgacggatcgatcctgaaccattgcgctgga
gagcttactccggttggaaagtttccagttgcatgtccgtggatgcaagcttttgaagat
aagggacaggtgcagttcgtcggccttgacgaacgcggccagctccattttcgtaattcc
gtcatcagcagcgagtgcaccgggtttgcactccacatcacatccacaaaagcgaggcca
agcgtcgttcacttggtttatacaacaaggcaagacttgctccacattatccctctcggc
agcagcaacttcacgtcttctcctccggaagtactagacgttggtagcggtaaacggcaa
ccagcgccgaaggatttcaacattcagcgtgtttgggagaggggagccaggatagtttct
acgctaggtggcagcgacgttgcggtcatcatgcaacccagccgtgggaatctcgaaacc
atttatccacggggattgatacttcacgctgtcgaagcggcactagctgagcaagacttt
gcagaagctatcacctgcgcgcggcggcacaggattgatctaaacgtcatcgtggacttc
cttggtgagaaggagttttcccgtttggccccggactttgtcaagcaagtcggcaaactt
agccttgtcacggagctggttagctgcctgggaaacgagaacgttttggaaacgacgtac
aagaagacattgtctacgctgaatccggaggacaggatggtcccggcggtttcatccaac
aagatgcaagtggtattagaagcgctgagaagtgctgtcgaaaatcacgtaacagatagt
ccatctcgagagatgtgcctgctgactattcttgctcgaaacgatccgcctttgctcgaa
gaggcgttgaaacgcatcaagctactacgtgaaggagagcttggtctcgggacttcagat
gatgaggaggctctggaagcaattgagtcacagggaaaacttgtggcggagagcgctcta
aagcacctgatatggctcgcggacgccgacgcggtgtttgatgcggcgctgggactttac
gacttgcatctagctgcaatggtggcgtctcactcccagcgagatcctaaagagttcctt
cctttccttcaggagctagaagacatgccaccctccataatgtgctacaagatcgactgc
aagctaaaacgatatgcaagtgcactgcgacacctttcgagcgccggggagacgtatttc
aacgaggcactcgatcacgtccaaagtcatccggagctcttctctctcgcactctccatc
tttacaggcgagagccaaaggtcgtctattatggaggcttggggagaatacttcctttct
caggaaaggtttgaggatgcagctatcactttcaggtcctgctcgcagctccacaaggct
ttagctgcgtaccgtgctggcggtcactggcagggtgtgctcatggttgctggccagttg
agcatgacaccggacgagatcaccaaccttgcactagagctccgagaagaactccaagca
atgggacagccaaaagaagctgcgagagtagctctggattattgtaaggacgtcaaggat
gctgtcggccttttgatcgaggcaagggactggatggaagtccttcggctgtgctacctt
catgctcagcccgatatcgtggatactatagtacagccagctgctgtggagtgcgcaaat
ggattggttggtcagttccaggagggcgtcgagaaagtcgggaagtattgtgctcgattt
gttgcggtacatcagcgcagggtactgctggaagcgaagataaaatcggatcaaggagaa
gaccgtttcgacgacgacaccgcatcagaggctagtagcaacttgagtgggatgagtgtt
tatacacgcgggactgcaagaacagcagcgacaggaagaacccgagccagacgccaaggc
aaagttcgagcagggagtcctggagaagagcttgctctagtggagcaccttaagaacatg
gctataagtccgcagctggcagacgagctcaggcctctgctacaaatccttgtcttcgta
aagcgtgaagacttgtcgtgcaaactccagcaagccgcatcaaaattccaagccactcaa
gcggaggccatgcgagcagttgaagaaaatggcattaccgtcgacaagacagcagcaaac
agggtggtaaactggtcctatcaagccttggaaagggtcttataa
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integrated database retrieval system
