Selaginella moellendorffii: SELMODRAFT_134604
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Entry
SELMODRAFT_134604 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_134604
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SELMODRAFT_134604
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SELMODRAFT_134604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
9645234
NCBI-ProteinID:
XP_002992015
JGI:
134604
UniProt:
D8T8V0
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MRIVSYNVNGLRARLSPARSLRAFLDSLDADIICLQETKIRRQELTADIATPQGYESFFS
CTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAGEGDKEFWLGSYDP
VLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNVYGPNVGCGDAERQDFKLNFYQVLQCR
LESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQWFRSLLVSEGGAFSDAFRVF
HPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQSPDGSHGNSSCDGFAKCGTD
MCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQLKHLPSIPPHEAPQLAARFMPE
LRGRQQSIVSIFQKLNDKATANTEPDTSRNVSKPAFTQETGSRKLQRLSQSRLTRFCYQR
HESSDKMSCTEVAVHGQSSSLTDEIQQSPESCDNNNCSEVAACGESASLMDMSDETPTES
SQQSLEKSAAGWERLKSLMSRNLPLCKGHGEPCVVRTVKKAGPNLGRGFYVCARAKVIFL
ERFFIIYSLFRAGPSFQS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgtgagctacaatgtgaatggactgagagcgcgattgtctccagcgagatcg
ctgcgcgccttcttggactcgcttgacgcagacatcatatgcctccaggagactaagatt
cgcaggcaggagctcacggcggatattgccacgccgcaaggatacgaatccttcttctct
tgcacgcgcaccgtgaagaaaggccgcctcggctactcaggtgtggctacgttttgcaag
gtggagtgtggaaacaatgtagcgttgcctgtggctgccgaggaaggctttacgggtctc
ttgactagtgccagagctggtgaaggtgacaaagagttctggcttggaagctacgatcca
gttctaaccgtggaaggatttacgaggcaggaacttctcgatttggacaacgaaggccga
tgcatcgtcacggatcacgggcattttgtactcttcaatgtctatggtcctaatgttggc
tgtggagacgctgaacgacaggactttaagctcaacttttaccaagtgttacagtgtagg
ctggaaagcatcttaaaacaaggcaggaggattattattgtgggggacttgaacatttct
ccatatcctatcgactcatgtgaccctggcccagaatttgataccagtccgagccgtcaa
tggtttagatcattgctggtgagcgagggtggtgcgttttcagacgcgtttcgcgtgttt
catcctgaaagagcagaggcttacacatgctggtctcaggcatcgggtgcggaggagttt
aactacggcagtcgtattgatcacgttcttattgccggtccctgcgctggccattgccag
tctcctgatggatcgcatggcaatagtagctgtgacggatttgcaaagtgtggaacagat
atgtgtgacattcttctcgagtttaagcgtgcaaagctggacacccttccgagatggagt
ggtgggagaagcttaaaactggatggttcagatcatgctcctgttattctgcagcttaag
catttaccttccattccaccacatgaagctccacaactggctgctcgatttatgcctgag
ctccgcggtcgtcagcaaagtatcgtttccattttccaaaagctcaacgacaaagcaaca
gctaacacggagcctgatacaagccgaaatgtttccaagcccgcttttacacaggaaacg
ggcagcaggaaactacagaggctgtcacaaagcagattgacacggttttgctatcaaagg
catgaatcttctgacaaaatgagctgcacagaggtcgcagtgcatgggcagagctccagc
cttacggatgaaatccagcaatcacctgaatcatgcgacaataacaactgctcagaggtt
gcagcttgcggggagagtgccagtctgatggatatgtcagatgaaacaccgacggaaagc
tctcagcaaagcttggaaaaatctgcagcaggctgggaaagactgaagagcctgatgtcg
cgaaatcttccattgtgcaagggacacggtgagccttgtgtcgtgagaacagttaagaag
gctggtcccaatcttggccgtggtttctacgtctgtgctcgagcaaaggtgatcttcctt
gaaagattcttcataatttattcgttgtttcgagcagggcccagcttccaatcctga
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