Selaginella moellendorffii: SELMODRAFT_135640
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Entry
SELMODRAFT_135640 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_135640
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
SELMODRAFT_135640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
PEP5_VPS11_N
PQQ_3
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_like
Beta-prop_SCAP
Beta-prop_IFT140_1st
PQQ
Beta-prop_SPT8
Beta-prop_DCAF4
Cytochrom_D1
NusG_II
Motif
Other DBs
NCBI-GeneID:
9630151
NCBI-ProteinID:
XP_002992611
JGI:
135640
UniProt:
D8TAL4
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MATSASDETLKRARAKNGRTVNTVSMLAGREINSSKNGKFSRAEACHVSSRILPDKGPEI
LERKSSRLYISQFSNDGSLFIAGFQDRTIVVYDADNNWTIHKRVKARNMNWTITDTALSP
DQRFLVYASITPVVFLVNLGNETGGIDSLANVTDIHEGLSLSSYDDDGDFGIWSLKFSQD
GNEIVAGSNDNCIYVYDLNSATTTYRVSAHNDEVNTVAFADESSHLIYSGSDDYLCKVWD
RRCFSANNKPAGELVGHLGGVTSIDSRGDGRHFISNSKDQSIKLWDIRTMSGGSNFERAQ
VPRIRWDYRCMRVPPRLRTVAHPGDESLMTYKGHEVLQTLIRCYFSPRISTGQKYIYTGS
YDGTVHIYDVVTGHTAATLSFHNHPVRDCSWHPWQPVLVSSCWGGNLVKWDHDPRSMDF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccacatccgccagcgatgagactttgaagcgagctcgagcaaaaaatggtagaaca
gtcaacacggtgtccatgctcgcggggagagagatcaactcttcgaagaatgggaagttc
tctcgtgccgaggcgtgtcacgtctcttcgaggattttgccggacaagggacccgagata
ctggagcgaaagagcagtcggctttacatcagccagttctccaacgatggatcgcttttc
attgctggctttcaggaccggacaattgtggtctatgatgctgataacaactggactatc
cacaagagagtgaaagctcgtaacatgaattggacaatcactgacacggctctctccccg
gaccaacgattcctggtctatgcgtctataactcctgttgtgttccttgtgaatcttgga
aacgaaactggtggaatagattctctggcgaacgtgactgatatccacgaagggctttcg
ctcagctcatacgatgacgacggggattttggaatttggtcactgaaattctcgcaggat
gggaatgagatcgtggccggcagtaacgacaactgtatctacgtctacgacttgaactcc
gcgactacaacgtatcgggtttcggcgcacaacgacgaagtgaatacggttgcgtttgcg
gatgagagtagccaccttatctattcgggaagtgatgactacctttgcaaggtatgggat
agaagatgcttctcagcaaacaacaaacccgccggagagctcgttggccatctcggggga
gtgacttccatagacagccgaggagacgggcggcatttcatttccaacagcaaggaccag
tcgataaagctttgggacatacgcacaatgtccggtggatccaatttcgaacgcgcgcag
gtcccgagaatccggtgggattacagatgcatgagagtccctcctcgcctgcgcactgtt
gcgcatccgggcgatgagtcgctcatgacatacaagggacacgaggttctccagacattg
atccggtgctacttctctcctcgcatcagcacgggccagaagtatatctacaccggctct
tacgacggcaccgtccatatctacgatgtggtgaccgggcacacagcggcgactctctcg
ttccacaaccatcccgtgagagattgtagctggcatccatggcaaccagtattggtaagc
tcctgctggggtggaaacctggtaaagtgggatcacgaccccagatcgatggatttctag
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