Selaginella moellendorffii: SELMODRAFT_136329
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Entry
SELMODRAFT_136329 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
smo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_136329
03083 Polycomb repressive complex
SELMODRAFT_136329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_136329
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SELMODRAFT_136329
Histone modification proteins
HAT complexes
HATB complex
SELMODRAFT_136329
HDAC complexes
Sin3A-HDAC complex
SELMODRAFT_136329
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SELMODRAFT_136329
PRC2.2
SELMODRAFT_136329
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SELMODRAFT_136329
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_136329
Chromatin remodeling factors
NuRD complex
SELMODRAFT_136329
NuRF complex
SELMODRAFT_136329
NuRF complex (fruit fly)
SELMODRAFT_136329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR35_TULP_N
MIOS_WD40
WD40_RFWD3
SM-ATX
Beta-prop_SCAP
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
9652100
NCBI-ProteinID:
XP_002992982
JGI:
136329
UniProt:
D8TBN2
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MAPTADYDLWKKHTPDLYDVIITHALDWPVTSAQWLPDHQRILLGIKALDDPEDCLENCV
LIVKLAVPADLDAEIPENWVRPPSFFLPCLSCMTQWIKHEGQVNRARYMPQCPTIVAAKG
ETSRVCIFDTTKHENSGGLPSQVIAETQPEMLLEGHTKGGHGLSWNPFRCGILASGSRDG
LVCVWDVGAAGSSSRPIITYPQNTPVGDVTWTSKHENVFSTGDEAGWMRTWDLRDPLNLV
VAVRAHLDPLESLAYHPYDEFCLATGSCDNTARIFDIRTLSQPMHTFVGHRDTVVRVDWS
PKYQGVLVTSSEDHRVMLWNVQRIGDEQSAEDAEDGPPELVFIHGGHWDIVHDFSWDATA
NLITSVGEDHTVQIWRTAKHIKRTMRGSSPSRMETPSSP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgacggccgactacgatctgtggaagaagcacacgccagatctctacgatgtg
atcatcactcatgctctcgattggccggtgacgtcggcgcagtggctccctgatcatcag
aggatcttgcttggaatcaaggcgctggatgatcccgaagattgtctggagaattgcgtc
ctcatcgtcaagctcgctgtcccagccgatcttgacgccgagatccctgagaactgggta
aggcccccctccttcttccttccatgtctttcctgcatgactcaatggatcaagcacgaa
ggccaggtcaatcgagctcgctacatgccgcaatgcccaaccatcgtcgccgccaagggc
gagacgtcgcgagtttgcatcttcgacaccacgaagcacgagaattccggcggcctgccg
tcgcaagtgatcgccgagacccagccggagatgctactcgaggggcataccaaaggtggc
catggtttatcctggaatcccttccgatgtggcatcctcgcgagtggatcacgcgatggt
ctcgtttgcgtgtgggatgtgggcgccgctggatcatcgtctcgtcccattatcacttac
ccgcaaaacactccagtgggagacgttacctggacgtcaaaacacgagaacgtctttagc
accggggatgaagcaggctggatgcggacatgggacttgcgagatcctctcaatctagtg
gttgcggtgcgtgctcacctagacccattggagtcactggcctatcatccttacgacgaa
ttttgtctcgcaactggttcgtgcgataacactgcccggatcttcgacatacgcacactc
tcccagcctatgcacacgttcgtcggtcacagggatacggttgtacgcgtcgactggagt
cccaaatatcagggtgtgttggttacgtcgtcagaagatcacagggtcatgctttggaac
gtgcaaaggattggggacgaacagagcgccgaggatgccgaagacggaccacctgagctc
gtgtttatccacggtggacactgggacatagtccacgacttctcctgggacgccaccgcc
aatctcatcaccagcgtcggagaagatcacactgttcagatctggaggacggcaaaacac
atcaagcgcactatgaggggctcttcgccatccaggatggagaccccttcctctccatga
DBGET
integrated database retrieval system