KEGG   Selaginella moellendorffii: SELMODRAFT_136329
Entry
SELMODRAFT_136329 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
smo  Selaginella moellendorffii
Pathway
smo03082  ATP-dependent chromatin remodeling
smo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SELMODRAFT_136329
   03083 Polycomb repressive complex
    SELMODRAFT_136329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_136329
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SELMODRAFT_136329
  Histone modification proteins
   HAT complexes
    HATB complex
     SELMODRAFT_136329
   HDAC complexes
    Sin3A-HDAC complex
     SELMODRAFT_136329
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SELMODRAFT_136329
    PRC2.2
     SELMODRAFT_136329
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SELMODRAFT_136329
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SELMODRAFT_136329
  Chromatin remodeling factors
   NuRD complex
    SELMODRAFT_136329
   NuRF complex
    SELMODRAFT_136329
   NuRF complex (fruit fly)
    SELMODRAFT_136329
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd CAF1C_H4-bd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR35_TULP_N MIOS_WD40 WD40_RFWD3 SM-ATX Beta-prop_SCAP WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 9652100
NCBI-ProteinID: XP_002992982
JGI: 136329
UniProt: D8TBN2
LinkDB
Position
Unknown
AA seq 399 aa
MAPTADYDLWKKHTPDLYDVIITHALDWPVTSAQWLPDHQRILLGIKALDDPEDCLENCV
LIVKLAVPADLDAEIPENWVRPPSFFLPCLSCMTQWIKHEGQVNRARYMPQCPTIVAAKG
ETSRVCIFDTTKHENSGGLPSQVIAETQPEMLLEGHTKGGHGLSWNPFRCGILASGSRDG
LVCVWDVGAAGSSSRPIITYPQNTPVGDVTWTSKHENVFSTGDEAGWMRTWDLRDPLNLV
VAVRAHLDPLESLAYHPYDEFCLATGSCDNTARIFDIRTLSQPMHTFVGHRDTVVRVDWS
PKYQGVLVTSSEDHRVMLWNVQRIGDEQSAEDAEDGPPELVFIHGGHWDIVHDFSWDATA
NLITSVGEDHTVQIWRTAKHIKRTMRGSSPSRMETPSSP
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcgccgacggccgactacgatctgtggaagaagcacacgccagatctctacgatgtg
atcatcactcatgctctcgattggccggtgacgtcggcgcagtggctccctgatcatcag
aggatcttgcttggaatcaaggcgctggatgatcccgaagattgtctggagaattgcgtc
ctcatcgtcaagctcgctgtcccagccgatcttgacgccgagatccctgagaactgggta
aggcccccctccttcttccttccatgtctttcctgcatgactcaatggatcaagcacgaa
ggccaggtcaatcgagctcgctacatgccgcaatgcccaaccatcgtcgccgccaagggc
gagacgtcgcgagtttgcatcttcgacaccacgaagcacgagaattccggcggcctgccg
tcgcaagtgatcgccgagacccagccggagatgctactcgaggggcataccaaaggtggc
catggtttatcctggaatcccttccgatgtggcatcctcgcgagtggatcacgcgatggt
ctcgtttgcgtgtgggatgtgggcgccgctggatcatcgtctcgtcccattatcacttac
ccgcaaaacactccagtgggagacgttacctggacgtcaaaacacgagaacgtctttagc
accggggatgaagcaggctggatgcggacatgggacttgcgagatcctctcaatctagtg
gttgcggtgcgtgctcacctagacccattggagtcactggcctatcatccttacgacgaa
ttttgtctcgcaactggttcgtgcgataacactgcccggatcttcgacatacgcacactc
tcccagcctatgcacacgttcgtcggtcacagggatacggttgtacgcgtcgactggagt
cccaaatatcagggtgtgttggttacgtcgtcagaagatcacagggtcatgctttggaac
gtgcaaaggattggggacgaacagagcgccgaggatgccgaagacggaccacctgagctc
gtgtttatccacggtggacactgggacatagtccacgacttctcctgggacgccaccgcc
aatctcatcaccagcgtcggagaagatcacactgttcagatctggaggacggcaaaacac
atcaagcgcactatgaggggctcttcgccatccaggatggagaccccttcctctccatga

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