Selaginella moellendorffii: SELMODRAFT_136926
Help
Entry
SELMODRAFT_136926 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SELMODRAFT_136926
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smo01007
]
SELMODRAFT_136926
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_136926
Enzymes [BR:
smo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SELMODRAFT_136926
Amino acid related enzymes [BR:
smo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SELMODRAFT_136926
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SELMODRAFT_136926
Prokaryotic type
SELMODRAFT_136926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
9640890
NCBI-ProteinID:
XP_002993331
JGI:
136926
UniProt:
D8TCM1
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
EHEHEQPGVSGDAIRRTFLNFFAARGHQLLPGSSLVPDDPTVLLTIAGMLQFKPIFLGQA
TTLDNVLLSRAQVPRRFACAVTSQKCLRTNDIENVGRTSRHHTFFEMLGNFSFGDYFKHD
AIRWAWELATSEYKLPAARVWVSVYKDDDEALAIWRDHVGIPEERIKKLGEEDNFWASGP
TGPCGPCSEMYFDFHPERGTDDADLGDDTRFLEFYNLVFMQYNRNDDGKLELLKQKNIDT
GLGLERMARILQKVPNNYETDLIYPIIQRASELAGVNYTAADDRTKTYLKVIGDHSRAVV
YLISDGVTPSNIGRGYIVRRLIRRIVRMGRLLGIRGDGEGNSEGTFLPSLAKVVISMSSN
VDPDVKQNAGRIFEELEKEELRFVQTLERGEKLLSQKLEEAAAACRRDGSTKPVLSGKDV
FMLYDTYGFPVEITEEVAGENDVQVDMAGFETEMEYQRRQSQEAHNVVKLSAGGTAAELT
SLVETKFVGYTTLESIAEVRALIARGGLVTEVREGDEVEIVLDTTPFYAESGGQIGDNGL
LVCRGGETDCIVQVKDVQKLGSNLIIHKGIVQQGTMAVGNNVQALVESSLRRRAQAQHTA
THLLQAALKKVLGSETSQAGSLVAFDRLRFDFTLSRKMAEEEVVQVEALVNEWISMAVPL
EWKVMPLAEAKNSGAIAMFGEKYGEQVRVVDVPGISKELCGGTHVSNTSEIRGFKIVLVE
GIASGVKRIEAVAGNAFIDHIFARENALRQICSSLKAKPEDLPARISGLQDELKALKSEA
TSLRAKVAIAEADVLTGRALLVGPGGVRILVGALETTDVDSLRAAVEHCVALHGDPSATL
LGACTEDGKVSLVAAFSPSVVKHGLKAGAFVGSVAKLCGGGGGGRPDFAQAGGKLPDKLP
GAIEKAKADLLDLLAGFQLP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gagcacgagcacgagcagccaggagtcagtggtgatgccatcaggagaacgtttctcaac
ttcttcgcagctcgcggccatcaacttttgccgggctcttccctggttccggacgatccc
acggtcttgctcaccatcgcgggcatgctgcaattcaagcccatatttcttggacaggca
accacacttgacaatgttctactctcgcgcgcacaggtgcccagacgatttgcttgcgct
gtcacgtcccagaagtgcctccggacaaacgacattgagaacgtcggtcggacaagtcga
caccacactttctttgagatgcttggcaacttcagcttcggggattacttcaagcacgac
gccattcgatgggcctgggagctcgcaacgtcagaatacaagcttcctgctgctcgtgta
tgggtcagcgtgtacaaggatgacgatgaagccctcgccatatggcgtgaccacgtagga
attccagaggaacgtataaagaagctgggagaggaagataatttctgggcaagcggtcca
acgggaccttgtggtccttgctccgagatgtatttcgacttccatccagagagagggacc
gatgatgcggatcttggagatgatacaagatttttggagttttacaacctggtgttcatg
cagtataaccggaatgacgatgggaaactagaacttcttaagcaaaagaatatcgatact
ggtcttggcctcgagcgcatggcaagaatactgcaaaaggtgccaaataactacgaaaca
gatctcatctatcctatcatccaacgtgcttctgagctggctggagtgaattatacagct
gctgacgaccggactaaaacgtacctcaaggttattggtgatcactcccgagcagtggtt
tatctcatttcggatggagtgaccccttcaaatattggccgcggatacattgtgcgtcgc
cttattcgaaggattgttcgcatgggacggctgctaggtattcggggtgacggtgaaggg
aattcggaaggaacgttcttgcctagccttgcaaaagtggtcattagcatgagttctaac
gtggacccggacgtgaaacaaaatgcggggcgtatttttgaagagctggagaaggaagag
ctacgatttgttcagacactggaaagaggagagaagctactttctcagaagctggaggaa
gccgcggctgcctgcagacgagatggaagcaccaagccagttttatccgggaaagacgtg
ttcatgctctatgacacttacgggtttcccgtggaaatcaccgaagaagttgctggagag
aatgatgtccaagttgacatggcgggctttgagactgaaatggagtatcaaaggaggcaa
tctcaggaagctcacaacgtggtcaagctgtcagctggagggacagccgcagagcttaca
tccttggttgagactaaatttgttggctatacgacgctcgagtctattgcagaagtgcgg
gcattgattgctagaggaggacttgttacggaggttcgtgaaggagatgaagtggagatc
gttttggatacaactcctttctatgcagagtccggtggccaaattggtgataatggactg
cttgtctgccggggcggtgaaacagattgcatcgttcaggtgaaagatgtccagaagctc
ggtagcaacttaattatccacaagggaattgttcagcaaggcacaatggctgtcgggaat
aacgtccaagctcttgtcgaatctagtttgaggaggcgtgcacaggctcaacacactgca
actcaccttctccaagcagccttgaagaaggttttggggtccgaaacttcccaagctggt
tcattggttgcattcgaccgtttgcggtttgattttacgctgtcaagaaagatggcagag
gaggaagttgttcaagtggaagcactcgtaaacgaatggataagcatggccgttccacta
gaatggaaggtgatgccactggcagaagcaaaaaacagcggtgctattgcgatgtttggc
gagaagtatggagaacaggtgagagtcgttgatgttccaggaatatccaaggaactctgt
ggaggcactcatgtaagcaacacaagtgagatccgaggcttcaaaatcgtgctggtggaa
ggcatcgcatcaggtgtcaagagaatagaagcagtagccggcaatgcttttatagaccac
atcttcgcacgggagaatgctctaaggcaaatatgctcctcactcaaggccaagccagaa
gatctcccagcccgaatatcaggcctacaagacgaactcaaagctctgaaaagcgaagca
acaagcttgagagcgaaagttgccattgccgaagccgacgtgttaacaggcagagctctc
ctagttggtccaggaggcgtaaggatactagttggagctctggaaactaccgacgtggat
tcacttcgtgcagcggtagagcactgtgttgcacttcacggggatccctcggcaacttta
ctaggagcatgcactgaggatggcaaagttagcctggttgcggccttcagcccgagtgta
gtaaagcacgggcttaaagctggagcattcgtggggtctgttgccaaactctgtggtgga
ggtggagggggtcgaccagattttgctcaggctggaggtaagctcccagacaagcttcca
ggtgcgatagaaaaggcgaaggctgacttgttagacttactggcgggctttcaactgccg
tga
DBGET
integrated database retrieval system
