Selaginella moellendorffii: SELMODRAFT_138197
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Entry
SELMODRAFT_138197 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SELMODRAFT_138197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_138197
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
SELMODRAFT_138197
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
SELMODRAFT_138197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
HIRAN
FAN1_HTH
TPR_7
Motif
Other DBs
NCBI-GeneID:
9637963
NCBI-ProteinID:
XP_002994113
JGI:
138197
UniProt:
D8TEU7
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
LNSETRDIYNGCLEARIAGRKYHRDVECQSGMRVHLVREPENPMDTYAVKVLTADGLSLG
HIPKELSRYLSPLMDKGVVDVQVIISGAFFNCSQSFQGYVSESTSEAARLKLDLREIQSR
TIGSLSEEKVLAVKWSRLMDAADKGQDHGCRYQQNFLYMLQVVLERDLHLFTPDEIELLE
AFRSISSDGQRLFVRLAQRKGPWFRLQNIFYEDIGDTNSAVHELVERRYLVFDADVNSSE
LLEHLTVQELKDLAVNSKIMVVTSKTFFLVFISVPAYRSKREILGSSNLTALIREATGPC
IRIAETVEVLLWRLQRLFFLNGEQEFHVFLLVDIGRINYPSYRCARTMPVFASREDFLAY
EQALQLAQVVDMSLEAGNSEALNSSFRKARTTLELINAHTEIKHPFLARFSAAWVYATIC
TVAASFLEKERRYAEAVNLFKQLLSMQYCPGRRGYWTLRLSIDLEHLQRLEESLLVAENG
LNDFNVRGGDRIALQRRVLRLGKLPRRWYVLCLPDIWPSATTLFLKVTIMGRPLNNANGM
KSRFYGYDGQQCSVEDLALQYYAGEDGGGWKGVHSESGIWLTLFGLLMWDVIFSDVPDVF
QTPFQVLVSFYRGCSTVLVCRLHHWTCARIHSIQSEPRLLNLVFKPYAMVELGNSWLRLG
QSTTGHHVAG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ctcaacagtgaaactagagatatttacaatggctgcctggaggcaaggattgctgggcgc
aagtaccacagagacgtcgagtgccaatctgggatgcgagttcacctggtaagggaacca
gaaaatcccatggatacatacgctgtgaaggtgcttacggcggatgggctttcgctggga
catattccaaaagagctttcgcgttatttgtctcctctcatggacaaaggcgtggtagac
gttcaggtaataatctctggggcgtttttcaattgttcacaaagctttcagggatatgtc
tccgagagtacatcggaagctgcacgcctcaagcttgatttgcgtgagatccagagtcgg
actattggaagtctctcagaagaaaaagtgctggctgtcaaatggagccgtctgatggat
gcagctgacaagggacaagaccacggctgtcgataccaacagaattttctctacatgctc
caagtggtattggaacgggatctccatctctttactccagacgagatcgaacttctcgag
gcatttcgttcaatctcgtctgatggacagcgcctttttgtaagattggctcaacgaaag
gggccatggttccgtcttcagaacatcttctatgaagatattggtgacacaaattctgca
gtccatgagttagtcgagagacgctacttagttttcgacgcggacgtcaattcgtctgag
ttgcttgaacatctgactgtacaagagctcaaagatttggcagtgaacagcaaaatcatg
gtagttacttctaagactttcttccttgtttttatttctgttcctgcttacagatcaaaa
cgtgaaatacttggcagcagtaatctaacggctttaattcgtgaagcaaccggcccatgc
attcgaatagccgaaacagttgaagttctactttggcgtttacagaggctgttctttcta
aacggtgagcaggagttccatgtttttcttcttgtggatattggaaggatcaactatcca
agctataggtgcgctagaacaatgccagtctttgcttctcgagaggactttctggcgtat
gagcaggcattgcaattggctcaggtggttgacatgtccctggaagctggtaattctgag
gctctaaactcctcttttcgaaaagcaaggactacactcgaattgatcaatgcacacacc
gagatcaagcatccatttttagcacggttttcggctgcatgggtgtatgcaacaatctgt
actgtggctgcatcgtttctggagaaagaacgcagatacgctgaagctgtaaacctcttc
aagcagctccttagcatgcagtattgtcctggacggagaggatactggactctccggcta
tctattgacttggagcacttacagcgtttagaagagagcctgctcgttgcagaaaacgga
ttaaacgatttcaacgtccgaggaggggatcgtatcgctttgcaacggagggttctccga
ctaggaaaacttcctagaaggtggtacgtactgtgtcttccagatatttggccttcagct
acaactctgtttctgaaggtgacgattatgggacggccgctaaacaatgccaatggaatg
aagagcagattttatggctacgatgggcaacaatgcagtgtggaggacctggcacttcaa
tactatgccggagaagatggaggcggctggaaaggagtccattcagaaagcggcatatgg
ctgacattgttcgggctgctcatgtgggatgttatcttttcagacgttccagatgtcttc
cagacaccttttcaggttcttgtttcattttatcgtggttgctctacagttcttgtttgc
agactgcaccattggacttgtgcacggattcattctatccagtccgaacctcgcttattg
aatctcgtcttcaagccatacgcgatggtggagctaggcaactcgtggctgagacttggg
cagagcactacgggacatcatgtagcggggtaa
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