Selaginella moellendorffii: SELMODRAFT_138825
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Entry
SELMODRAFT_138825 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_138825
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SELMODRAFT_138825
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SELMODRAFT_138825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
T2SSE
AAA_30
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
9641178
NCBI-ProteinID:
XP_002994578
JGI:
138825
UniProt:
D8TG59
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
SHFNPIQTQAFHTLYQTDHNVLLGAPTGSGKTISSELAMLRLFNTQPDMKVIYIAPLKAL
VRERVDDWKKSLVPTLGKKLVELTGDFTPDLLALLEADIIISTPEKWDGISRSWHNRSYV
TKVGLMIIDEIHLLGADRGPILEVVIVSRMRYISSQTARHVRFVGLSTALANAKDLGDWL
GIENVGLYNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAIRTHSPLKPVLIFVS
SRRQTRLTAFDLIQFAAQDEQPRQFLQMNEEDNSMILYKVVDSSLKHTLQFGIGLHHAGL
CDSDRTLVEELFYNNKIQVLVCTSTLAWGINLPAHLVVIKGTEYFDGKSKRYIDYPITDV
LQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLVHHLHNHLNAEIAAGT
IATKQDALYYLTWTYLYRRLVMNPSYYGLEDTAAESVNHFLSSLVNGTLEALDDAGCIKV
SEDNVEIQMPGLIASKYYLHYTTVALFSSNVHSESSLEELLQLLSSAAEYDELPVRHNEE
NLNAILAQQARMRVDNKLLDDPHVKANLLFQAHFSRLELPISDYVTDTKSVLDQSIRILQ
AMVDAAANGGWLRTTIRAMQLLQMIMQGTWSDHSPLLMLPNTTTELLPSLPFATLDEFLS
LPSQRLRKLFERFMSQSQAWNFLPRIDLTWRMRDQRLSEGDKFTSFAIDIEVKSNNTRRS
STRAFLPRYSKSKEEGWWIVVGSTSTWELFAMRRVSIKDKRLSTSVAVPRVPAGTQEIAL
FLVSDCYVGLDQTHTIPV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
tcacatttcaatcctatccaaacgcaggcttttcacactttgtaccaaactgatcataat
gttctgctgggcgctccaactgggagtggaaaaacaatatcctcagagcttgccatgctt
cgcctttttaacacacaaccagatatgaaggtcatatacattgctcctttaaaggctctt
gtacgggaaagagttgacgactggaagaaaagtctggtacccacgcttggaaagaagctg
gtggaattaacgggcgattttactccggatttacttgcgttgcttgaagcagatatcatc
atttcaactcctgaaaaatgggacggtattagtcgtagttggcacaacagaagctacgtt
acaaaggtcggcctgatgatcattgacgaaatacatttgctaggcgcagacagaggtccg
atccttgaggtagttatagtatcccggatgcgctatatttcttctcaaaccgctcgtcat
gttcgatttgttggcctgtcaacggcccttgcgaatgcaaaggatttgggagactggctg
ggcattgaaaatgttggactgtataatttcaagccaagcgttcgcccagtaccactagaa
gttcatatacagggatatcctgggaagttttactgccctcgaatgaatagcatgaacaaa
ccaacttacgctgctatcagaacacactcgcctttgaagccggttttgatatttgtctct
tctcgtcgtcaaactcgacttactgccttcgatctcattcagttcgcagcccaagacgaa
cagccacgccagtttttgcaaatgaatgaagaggacaacagcatgattctgtacaaggtt
gtggatagtagtctaaagcacacattgcagtttgggatcgggttgcaccatgctggtctc
tgtgacagtgacagaactctagttgaggagctcttttacaacaacaaaattcaggtttta
gtttgcacgagcactttagcttggggaatcaatctcccagcacatctagttgtaatcaag
gggaccgagtattttgatggaaagtctaaacgctacattgattatcctatcacggatgta
ttgcaaatgatgggccgggcaggacggccccagttcgatcaacacggaaaggctgtaata
ttggttcatgaaccgaagaaaagcttctacaagaagtttttatatgaaccttttccagtt
gaaagcagcttggttcaccaccttcataatcacttgaacgcagagatagctgctggaaca
attgcaacaaagcaagatgctctttactatttgacatggacgtatctgtaccggcggctg
gttatgaatccaagctactacggtttggaagacacagcagctgagtccgtcaatcatttc
ttgtcaagtcttgtaaatggcacacttgaagcactagatgacgctgggtgcatcaaagtg
agcgaagacaacgtagagatacagatgccgggactcattgcttcaaaatactatcttcac
tacacaacagtagcacttttcagctcaaacgtacactctgagagttcattggaggagcta
ttacagctgctttcatctgctgcggagtatgacgagcttcctgtccggcataacgaggaa
aacctgaatgcgattcttgcgcagcaagcacgaatgcgtgtggacaataagctgctagat
gaccctcatgtgaaggccaacttgctgtttcaggctcatttctcacgactggagctgcca
atttctgactacgtgacagacacgaagtcagtgctggaccaaagcatacgtatacttcaa
gcgatggtggatgctgcggccaatggaggatggctgagaacgaccattcgggctatgcaa
ctcttgcagatgattatgcagggaacatggtctgatcattcgcctttgctcatgctgcca
aacacaaccacggagctcttgccttcgctgccattcgctacgttggacgagttcctgtcc
ttgccgtcacaacgcttgcgcaagctgttcgagcgctttatgtctcagtcccaagcatgg
aattttcttccacgaatcgatcttacgtggaggatgcgagatcaaaggctgagtgagggg
gacaagttcacgtcgttcgcaatagacatcgaagtcaagtccaacaacacaaggagaagc
agcactcgagctttcctgcctcgatactcgaaatccaaggaagagggatggtggatcgtt
gtaggaagcacaagtacttgggagctcttcgccatgaggcgcgtgagcatcaaagacaag
cgtctcagcacaagcgttgcagtgccaagagttcctgcgggaacacaggagatagcgctg
ttcctcgtctcagattgctacgttggcctcgatcaaactcataccatcccggtttag
DBGET
integrated database retrieval system
