Selaginella moellendorffii: SELMODRAFT_138946
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Entry
SELMODRAFT_138946 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_138946
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_138946
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SELMODRAFT_138946
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Topoisomerases
SELMODRAFT_138946
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
SELMODRAFT_138946
Centrosome formation proteins
Centriole proteins
SELMODRAFT_138946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
Motif
Other DBs
NCBI-GeneID:
9641250
NCBI-ProteinID:
XP_002994651
JGI:
138946
UniProt:
D8TGD2
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
RFDQVFSNIMSAKSEPAISSCKSNENWTKVTFKPDLAKFHMTYLEEDVVALMSKRVLDIA
GCLGRTVKVELNGQKLPVKTFSDYVGLYLASAQKGKEETLPRIYERANDRWEVCVSLSDG
QFQQVSFVNSIATIRGGTHVQHVSEQIVSHIQEIVNKKNKNANVKGFQIRNHLWVFVNSL
IDNPAFDSQTKETLTTRQTSFGSKCELSPEFLKKVSKCGVVDNVLSWADFKQSKELKKND
GAKRQRLTGIAKLDDANDAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYGVFPLRG
KLLNVREATHKQIMDNAEITSIKQILGLQQGKGYENTKSLRYGHLMIMTDQDHDGSHIKG
LIINFIHTFWPSLLKVPGFLVEFITPIVKATHKNGKVLSFYTMPEYESWKESLRGETKGW
SIKYYKGLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKKTEARKIWLRGY
QPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKILFAAFKRNFTS
QAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQFGTRSQGGKDH
ASARYIYTSLTPLTRTIFPKPDDILLNFLREDGQSIEPFWYAPILPMVLVNGSEGIGTGW
STFVPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGVSYTVTGIVEQV
NETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTRVHFEISLSEEK
MAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHIRLELYVKRKEV
QVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPFPKKAKASDLPV
VGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERDKLEGDVEELKK
CTPKDLWEKDLDNFLEQLTV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
cgatttgatcaggtgttctctaacatcatgagtgcgaagtctgagccagctattagctcg
tgcaagtccaatgaaaattggactaaggtgactttcaagcccgacctcgccaagttccac
atgacgtatctggaggaggatgttgttgccctgatgtccaaacgtgttttggatattgcg
ggctgtcttggcaggactgttaaggtggagctgaacggccaaaagctcccagttaaaacg
ttttcggattacgtggggctttaccttgcctccgctcagaaaggcaaagaagagacgctt
ccaaggatatatgagcgtgcaaatgatcggtgggaagtatgcgtgagtttaagcgatgga
cagtttcaacaggttagctttgtgaacagcatcgccacaatccggggtggcacgcacgtc
cagcatgtttcggaacagatcgtaagccacatacaggaaattgtgaacaagaagaacaaa
aatgcgaacgtgaagggtttccaaatcagaaaccatctttgggtctttgtcaattctctg
attgacaaccctgccttcgattcccagacgaaggaaacattgactactcgtcaaactagt
tttggatcgaagtgcgagctgtccccagagtttctgaagaaagtttctaaatgcggggta
gttgacaatgttctgtcgtgggcggactttaagcagagtaaggagctaaagaagaacgac
ggtgccaagaggcagcgcctaactggaatagccaagctggacgatgcaaatgatgccggc
ggcaagaactccgaagcatgcactttgatcttgactgaaggagattcagctaaagctctt
gctatgagtggcatcagtgtggttggccgtaaccactatggtgtgtttcctctcagggga
aagcttttaaacgttcgagaggcaacgcacaagcaaataatggataacgctgaaatcacc
agcataaagcagatactggggttgcagcagggaaaaggttatgaaaataccaagtctctt
cgttacggtcatttgatgattatgaccgaccaggatcacgacgggtcacacatcaaaggt
cttattatcaatttcattcacacgttttggccatcacttttgaaagttcccggtttcttg
gtggaatttatcacgccaattgttaaggcaacacataagaacggaaaggtactatccttc
tatactatgccggaatacgagtcgtggaaagagtccctgagaggagaaaccaagggttgg
agtatcaagtactacaagggtctgggcacgagtacagcaaaggaaggcaaggagtacttt
cgagatctggtcaagcacaagaaggacttcgcatgggacaatgatgaagatggtgactct
atagagctagcatttagcaagaaaaaaaccgaagccagaaaaatatggctgcgagggtac
cagccagggacatttctggatcaaactcagcgggtcatcacgtacagcgatttcatcaat
aaggaattaatcctgttctcgttggctgatttggcaaggtctgtcccgtctatggtggac
ggattgaagcccggacagcgcaagattctgtttgctgcattcaaaagaaattttacgtcg
caagctaaggtagcgcaattttctggatatgtctccgagcattctgcttatcaccatgga
gaacaaagtctcgcgagtactatcataggaatggctcagaatttcgtcggtagcaataac
atcaatatccttgctccgattggacagttcggtacaaggagtcagggcggaaaggaccat
gccagtgcgcgttacatctatacgtctctaactccgttaacacgtactatatttcctaaa
ccagatgacattttactgaattttctgagagaggatggacagtcgatcgagcccttctgg
tatgcaccaattcttcctatggtgcttgtcaacggctctgaaggcattggcactgggtgg
agcactttcgtgccaaattacaatcctcgagatatcgttaccaaccttaagcatcttttg
cgcgatgagccgctggagccaatggatccgtggtacaaggggtttaaggggacgatagtg
aaatcggcaagcaaagaatctggtgtcagctatacagtgactggcatcgtagagcaagtc
aacgagactactatacgtgtgctagagcttcccattagaaagtggactcaagactataag
gagtttcttgaagcgttgctttgtggcacagagaaaatcaaagaaccctctattaaggac
tacagggagcataacactgatacgcgagtgcactttgaaatttctttatccgaggaaaaa
atggctgaagctcttgcagagggtctcacgaaaaagttcaagctgagtaccactatcagc
accagtaacatgaatctttttgataaggacgggcatattcgaaagtatgacacgcccgaa
caaattcttgaagacttctaccatattcgtttggagttgtacgtcaaaagaaaggaagtg
caagttgagaatttgcaatacgagctactgaagcttgacaacaaagtccgatttattctc
ggtgttgtcaaaggcgaaattgttgtaaacaacaggaagcgagccgagttactagtcgag
ctaaagaccaaaggctttactccgttccctaagaaggcaaaagcttcggacttgcctgtt
gtcggtggtgatggttctgacgtggaagcggatgacgaagaaaagctgaataaaggagtt
cgtgctggtgattacgagtatcttctatctatgccaattggcacgctcactctagagaag
gttcagcagctctgcaacgagcgtgataagcttgaaggtgatgttgaagaattgaagaaa
tgtacaccgaaggatctctgggagaaggacttagataacttcctcgaacaactgacggta
tga
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