Selaginella moellendorffii: SELMODRAFT_139408
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Entry
SELMODRAFT_139408 CDS
T01496
Symbol
SmABCB13
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_139408 (SmABCB13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_139408 (SmABCB13)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_139408 (SmABCB13)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_139408 (SmABCB13)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_139408 (SmABCB13)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_139408 (SmABCB13)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_139408 (SmABCB13)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_139408 (SmABCB13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
Zeta_toxin
AAA_29
AAA_15
RsgA_GTPase
AAA_16
AAA_30
QRPTase_N
Motif
Other DBs
NCBI-GeneID:
9663160
NCBI-ProteinID:
XP_002960848
JGI:
139408
UniProt:
D8QQ27
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MLNKGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDAGGDAIPVDDDVLEDEEDIDFSPVA
VSFFKLFVYAGTWDWVLMILGTLASAVHGAALPVYLHFFGKILNCYRHRTSQARVYDDLT
QYVLDILYIAGAVLLAGWIQVSCWLLTAERQSSVMRSKYLQVLLNQDMGFFESYASNGDI
VSQVSNDVLFIQYTIGEKVSHYVHNMATFVGGLVVGFLNCWQIALLTLATGPLIVVAGAI
SNIFLHKLAESVQDAYSEAASIAEQAIAYVRTIYAFANETLVKHLYASALQTTLGYGVQI
SLVQGVGLGFIYGLAICSCALQLWFGRILVGKGDANGGEVIVAAFAIILSGLGLNQAATN
FPAFEQSKIAAYRLYDVIERTIANTQQGNILANVQGSLELKHVYFSYPSRPDVPILSGLY
LQVAPKKTMALVGSNGAGKSSILSLILRFYDPTLGEVLLDGENVRNLQMTWLRSQIGLVS
PEPALLASSIKDNILYGRSNASMDDVEEAAKTAHAHAFISSLPFGYNTLLGDGGITLSEE
MKLKLAIARAVLKNPPILLLDEATSNLDPQAERNVQEALDILILGRTTLVIAHRLANIRN
VDVIAVIEEGQLVELGTHDELMAADGTYAELIRLEETARRFISRNKKSFRETAHTSSPRL
IRSSSVAAQNGQRYAEFSSVHSSPPQIPSPSSEDKESVTFGSGTAEGEKNPQHPPPLDIH
NFQQIPFKSDPESPVSPLLTSDPKNERSHSKTFSRSISQLVELESTSIIPETPGNNEKPS
YWRLIQLSGPEWCYAFVGSIGAAFFGSFNPLMALFVVQTAQYYYHAQDHRSKREINKWCL
LVTGMGLATVFVNFLQHFYFGIMGEKMTERVRRLMFSAILRNEIGWFDQDDNSTEALSIQ
LANDATFVRAAFSNRLSIIIQDTAAVVVTVLLTTLLQWRLGTVAIATIPLLIVSAIFQKM
WVMGFSGNIREWHTKASVVIEDAVRNICTIASFSAGDKVVQLYKNQLARLQARSFIRGQV
TGIAFGISQFLLFASNAFVLWYGTEILKRHDGRLTEVLKAFTVFSFATFALVEPFCLAPY
ILKRRESLRPVFQIIDRKPTIESDDGDGLKLPNIFGTIEFRGVEFRYPTRPDAVILNDFN
LKATGGQTVAVVGLSGSGKSTVISLIERFYDPVAGSVTLDGKDLKAFNLRWLRSNMGLVQ
QEPVLFSTTIRENIIYAKRNATEAEMKEAARIANAHQFISGLPHGYDTHIGMRGVELTAG
QKQRIAIARVVLKNAPILLLDEASSAVESESSRVVQEALDTLILGNKTTIVIAHRIAMLK
RVDKVAVLHDGRIVEEGAHNVLMERGGLYSRFIMSHMSKPMRQHTVSSYGG
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaaggggctgtttggatggtctccacctcacatccagccactgacgccagtg
tccgaggtctcggagccgccagagtcgccttcgccttacttggatgctgggggtgatgct
atacccgtggatgacgatgttctagaggatgaagaggatatagatttctccccagtggca
gtctcgtttttcaagcttttcgtgtatgctggaacttgggactgggtgcttatgatcctt
gggacactcgcatcggctgttcacggtgctgcgctgccggtttacctccacttctttggg
aaaatcctcaattgctaccggcacagaacgagtcaagcgcgagtatacgatgatctcacg
cagtatgtcctggatattctttacattgcgggagctgttttgctggctggatggatacag
gtctcttgctggctcttgactgcggagaggcaatcttctgtaatgcggtcaaaatatctg
caagttttgctcaatcaagacatggggttttttgagagttatgcaagcaatggagatatt
gtgagccaagtttcgaacgatgttctgtttatccagtatactattggggaaaaggtcagc
cattatgtgcataacatggctacattcgtcgggggtcttgtagtaggatttttgaactgc
tggcagatagctctcttgacgctagcgactggacctttaatagttgttgctggagccatc
tccaacattttcttgcataagcttgctgaaagcgttcaagatgcctactctgaagctgcg
agtatcgctgaacaggctattgcatatgtccgaactatatatgcttttgcgaatgaaact
ttggtgaagcacttgtatgcaagcgctcttcagactacacttggatatggcgttcaaatc
agtcttgtccaaggcgttggtcttggctttatctacggtctagctatctgttcttgcgct
cttcaattgtggtttggtcgaatacttgttggaaaaggagatgccaacggtggtgaagtt
atcgtggcagccttcgcaatcattttaagcggactagggttgaaccaggcagcaacaaat
ttcccggcttttgaacagagcaagattgcagcttatagactctatgacgtgattgaaagg
acaatcgctaacactcaacagggaaatattcttgctaacgttcaaggaagtttggagctc
aagcatgtctatttcagctatccttcgcgccccgatgtacccatattgagtggcttgtat
ctccaagtagctccaaagaaaaccatggctttggttggaagcaatggtgctgggaaaagt
agcattctatcactaattcttcgcttttatgatccaactttaggcgaggtgcttttggac
ggtgaaaacgtacgaaaccttcaaatgacgtggctgagaagtcagattgggttagtgagt
cccgagcctgcgctgcttgcgtctagcatcaaagacaacattctttatggccgatcaaac
gcaagcatggatgacgtcgaggaggctgcgaagactgctcatgctcatgcatttatcagc
tcgctacctttcggatacaatacactgcttggcgatggagggataactttgtcagaagaa
atgaagctaaagctagccatcgctagagccgtcttaaagaatccacccatcctactactt
gacgaagctaccagtaatcttgatccacaggccgaacggaacgtgcaagaggcccttgac
atactgatacttggtcggacgacactcgtaatcgctcaccgcctggctaatatccggaat
gtggatgtaatcgctgttattgaagaaggccagcttgttgagcttggtactcacgatgaa
ttgatggctgccgatggaacgtacgcagaactaattcgccttgaggagacggcaagacgt
ttcatttccaggaacaagaaaagcttcagagaaacagctcatacctcctctcctcgattg
atacgctcttcttccgtcgcagcgcagaatggacaacgctacgcggagtttagtagcgtt
cacagctcaccgcctcaaattccaagtccatcatctgaagacaaagaatccgtaacgttt
ggcagcggaacggcggaaggagaaaaaaatccgcaacacccgccaccgctggatattcac
aacttccaacaaatacctttcaagtctgatccggaatctcccgtgtcgccgctcctgaca
tctgaccccaagaacgagagatctcactcgaagacattcagcagatccatctcgcagctg
gtagagctggaatcgacgagcattatccccgagactcctgggaacaatgagaagccaagc
tactggaggctcatacaactgagtggacctgaatggtgttatgcctttgtcggaagcatc
ggtgcggcgttttttggctccttcaatccgttaatggcccttttcgtcgttcaaactgct
cagtactactatcacgcgcaggaccaccgcagtaaacgtgagataaacaagtggtgcttg
cttgtgactggtatgggattagcgacggttttcgtcaacttcctgcaacacttttacttc
ggcatcatgggagaaaaaatgactgaacgagttcgaaggctaatgttctcagcaatttta
cgcaacgagatcgggtggtttgatcaagacgataatagtaccgaggccctgtcgattcag
ctggcgaatgatgctacttttgttcgggcagcctttagcaaccggctctcaattatcatc
caagacaccgctgctgttgtcgtgactgttttattgacgaccttgctccagtggcgtttg
ggaacagttgcaattgctaccattcctctgcttatagtctcagctattttccagaaaatg
tgggtgatgggattttctgggaacattagagaatggcatacgaaagcttccgtagtcatt
gaggacgcagtcaggaatatatgcaccatcgcatccttctctgctggagataaagtcgtt
cagctgtacaagaaccaactcgcgagactccaggcccgaagttttatccgtggtcaggtc
acagggatcgccttcggcatttctcagttccttctgtttgcatccaacgctttcgttctc
tggtacgggaccgagatattgaaaaggcacgacgggaggctcaccgaagtcttgaaggca
ttcaccgtgttctcgttcgcaacgtttgcgctggtggagcctttctgtctggcaccttac
atcctcaagagacgggaatcactgaggcccgtgtttcagataattgacaggaaaccaaca
atcgagtccgacgatggtgacggcctgaagcttccaaacatctttggtaccatagagttt
cgtggcgtcgagttcagatatccgacgaggccagacgcagttatactcaacgatttcaat
ctcaaggcaacgggtggacagacggtggcagtcgtgggactctcaggatccggcaagagc
acagtcatctctctgatcgagcggttttacgaccccgtagccggctcggtgacactggac
ggaaaggacctcaaggctttcaacctgcggtggcttcgcagcaacatgggcctggtacag
caagagccggttctattctccaccaccattcgagagaatatcatctacgccaagcgcaac
gcaaccgaggccgagatgaaggaggctgcccgaatagcaaacgctcaccagtttatcagc
gggctgcctcacggatacgacacgcacatcggcatgcgaggggtggagctcaccgccgga
cagaagcaacgaatcgccatcgcgagagttgtgctcaagaacgctcccatcttgctgctg
gacgaggcaagctccgcggtggagagtgagtcgagccgggtggtacaggaggcgttggac
acgctcattctggggaacaagaccaccatcgttatagctcacaggattgcgatgctcaag
cgggtggacaaagtggcggtgcttcacgacggccggattgtggaagaaggagctcacaac
gttctcatggaaagaggcggcctctactcgcggtttatcatgtcacacatgtccaagccg
atgaggcagcacacggtttccagctacggtggttaa
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integrated database retrieval system
