Selaginella moellendorffii: SELMODRAFT_139717
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Entry
SELMODRAFT_139717 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_139717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_139717
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_139717
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SELMODRAFT_139717
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SELMODRAFT_139717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
L544_helical
Motif
Other DBs
NCBI-GeneID:
9656193
NCBI-ProteinID:
XP_002960381
JGI:
139717
UniProt:
D8QR52
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MPKLKHSDYYTEPRVQELAAKERAEPGYCRRVSDFIVGRKGYGHIKFLGETDVRRLDIEG
IIQFNKCEVLVYMDESKKPPLGQGLNKPAEVTLLNVMCIDKSTGRSVTDGAQAERFEKKL
KKKTQAQGAEFVSFDVLKGEWTFRVKHFSRYAFDESEDSEDDALESGKLVFLESRGPSSV
DEGEEELMEDVRSRNHRTALPHSLPAQLKLDPLKLHQLKASFFPLDENESAEMTDVGTYK
KSTPPSVIKQYKSSLEEGELKRPSKQIKLSPHSLWQRSPMLLPQQSSFQALTAPTPSLVK
TSRKLTSGFRLQESDSEKLLSTSNSGGGVVDAALFMGTSFRAGWGPNGVLVHSGSSVGQS
KATTVVSSSIKLETVSLDRTARDDRGKVKDILLDFQFNAPLALHMSLSKVVSESNGLKMR
SLVCSKDQLERLTNDYEDLIEKQHGTPGVSAADQLVLKHQVLAWQLICVLFSEKDALVTE
TEEASESMAEMKARIANIDPGTETLVRKAAFSGWLQDSVFHLVQADLDSTGKDASHIRDI
MVLLTGKQVELGVRKAILAGDVRLACLLSQGGGLVANREDILSQLEVWESEGLCDGLIEN
DRISLFRLLGGDIHGSLGDQEIDWKRFMGMLMWYTLPPEAGLPDIILEFQRLVEEGDAFK
PVPMYIEEAPVEVKEAPAPPPAYDSAYYLMLLHARGSLDESDVNKMFSSSASTFDRLDHR
AAWHQKEVLQAIGVLNQSDSYALDMSFVSQLLAANLIHWAIYVVLHMPVCPETTGLHEKV
VKDILSQYSEVWSNSEVQQKFIEDELGIPPEWLHETLAIYWLYRGDFEKSLVHYLKSFMW
QEAHVVFMTKVSASLLLNGKKEEIWSYASQMDAHKMEIENWDIGSGLYIDFFTLLGSFEN
SEAYDTELESPVEAKMCACKDFFERLKESQRLWEAKASKLLRLALTRMADEVAALLVSES
KVKRVDASLEMEIQSVAMEAGSPEDVQLCRLQGAVSSFSNWIVQIAA
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaactcaaacactctgattattatacggaaccgagggtgcaagagctggcagct
aaagagcgtgcagaaccaggatactgccggcgagtgtctgattttatagttggccgaaaa
ggatatggtcacatcaaatttcttggagagacagatgtcagacgtcttgatatcgaaggg
atcatccagttcaacaagtgtgaagtgctggtctatatggatgagagtaagaagcctcct
ctcggacagggattgaacaagcctgcggaggtcactcttttaaatgtcatgtgcattgac
aaatctactggacgcagcgtcacagatggggcacaagcggaacggtttgaaaagaagttg
aagaagaaaactcaagcgcagggtgcagagttcgtttcttttgatgtcttgaaaggtgaa
tggacatttcgagtgaagcacttcagccgttatgcttttgatgagtcggaggactcggag
gacgatgctttggaatctggaaaactggtatttctggaatcgcgaggtccgtcttctgtg
gacgaaggagaagaagagctcatggaggatgtgagatcaaggaaccataggacagctctg
cctcattcattgcccgcgcagcttaaactggatccattgaagttgcaccagctcaaagca
tcgttctttcctctggatgaaaacgagtcggcagaaatgactgacgttggtacctacaag
aaatcaactccgccgtcggttatcaagcagtacaagtccagtttggaagaaggcgagtta
aaacgtccatcgaagcagataaagctgagtcctcattcactatggcaacggtcaccaatg
cttctgccgcagcaatcgtccttccaggctcttactgctccaacgccatcactggtgaag
acttcgagaaagctaacgtctggtttccggcttcaggaatctgacagcgaaaaacttttg
tccacgagcaattcgggtggtggtgttgtcgatgctgcacttttcatggggacctctttc
cgtgccggttggggtccaaacggagtgttggtacattctggttcctctgtgggccagtcc
aaagcgactacggtggtttcgtcctccataaaacttgagacggtttctctcgacagaact
gcaagagacgatcgaggtaaagtcaaggatatccttcttgattttcagtttaatgctcct
ctcgcgctgcacatgtccctgagcaaggttgtgagcgaaagtaacggcttgaagatgcgg
agcttggtttgtagcaaggatcagctggaaaggctcaccaacgactacgaggacctgatc
gaaaagcagcatggtactccaggtgtatccgcagctgatcagctggttttaaagcatcag
gtgctggcatggcagctcatctgtgttctcttctcggagaaggatgctctggtcaccgaa
acggaagaggcttcagaaagcatggctgagatgaaagcccgtatagcgaacatcgatccg
ggaactgaaactctagtgcgcaaggctgcatttagtggctggctacaggacagcgtcttt
catctggtccaggccgacttagactcaaccgggaaggacgcgagccatatcagggatata
atggtcttattaactggcaaacaggtggagctgggtgtgagaaaggccatccttgcaggg
gacgttcgtttggcgtgcctgctgagccagggcggtggactggtggcaaacagggaggac
atcttgtcgcagttggaggtctgggagtcggagggactttgcgacggtctcatcgaaaat
gacaggatatcgctgttcaggctgcttggaggagatatccacggttctctcggcgatcaa
gagattgactggaagcgcttcatggggatgttgatgtggtacacgctgcctcctgaggct
gggcttccggacatcatcctcgagtttcaacgtcttgttgaggagggagacgcgtttaag
ccggttcccatgtacattgaagaagcaccagtggaggtcaaggaagctccagcaccaccg
ccggcctatgacagcgcttactatctcatgcttttgcatgcgagagggagccttgacgaa
tcagatgtgaacaagatgttttcctcctcggcatctacatttgatcgtctggatcaccgg
gccgcttggcatcagaaggaagttctccaggcaatcggcgttttgaatcagtcggattcc
tacgcgctggacatgagttttgtctcacagcttcttgccgccaacttgatacattgggca
atttacgtggtactccatatgccagtgtgcccggaaactacaggtttgcacgagaaggtg
gtcaaggatatactgagccagtactctgaagtttggagcaactcggaggttcagcagaag
tttatagaggacgaactcggtattccaccggagtggctgcacgagactttggctatctac
tggctgtaccggggagactttgagaagagccttgtgcattacctcaaaagctttatgtgg
caagaggctcacgtcgtgtttatgaccaaggtgtccgcatctttgctgctaaatgggaaa
aaggaagagatttggagctacgcgagccagatggatgcgcataaaatggagatcgagaac
tgggacattggctccggcttgtacatagacttctttactctcctggggtccttcgagaac
agcgaggcttatgatacagagctggaatctcctgtggaagccaagatgtgtgcgtgcaag
gacttcttcgagaggctcaaggagtcgcaacgattgtgggaagctaaagcttcgaagcta
ctgaggcttgcgttgacgaggatggccgatgaagtggcggcgctcctggtgagcgagagc
aaagttaagcgcgtggatgcgtcactggagatggaaatccagagcgtcgcgatggaggct
ggaagtcccgaagacgtccagctttgccgcctccaaggagccgtgtcaagcttctccaac
tggatcgtccaaatcgccgcgtga
DBGET
integrated database retrieval system
