Selaginella moellendorffii: SELMODRAFT_13999
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Entry
SELMODRAFT_13999 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00906
Carotenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SELMODRAFT_13999
Enzymes [BR:
smo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
SELMODRAFT_13999
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NnrU
PEMT
DUF2105
ICMT
Motif
Other DBs
NCBI-GeneID:
9648968
NCBI-ProteinID:
XP_002985044
JGI:
13999
UniProt:
D8SNP8
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
LVGEDSAVFELQSQKLSSWLYFTAILAAVTVVLYFAWLDPSTGYGTAYVDWLSTLTNNSP
ELVITAMLAIFALVHSGLASFRDRGEQLIGERAYRVVFAGLSLPLAVSAVVYFINHRYEG
AQLWHVQDVPGVHQLVWLLSFTSFFFLYPSTFNLLEVAAVDKPKLHMWETGIMRITRHPQ
MVGQFMWCFAHTLWIGSSFTLTTSIGLLAHHLFGVWNGDRRLSLRYGDAFEAVRQRTSVV
PFVAIAQGRQKLPRDFYKEFLRLPYLIITALTLGAYFSHPLLRLGSSSLHW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ctcgtgggtgaagactctgcggtgtttgagctccagagccagaagctttcgtcctggctc
tactttacagccattcttgccgccgtcaccgtggttctctacttcgcgtggctcgatcca
agcacgggctatggaaccgcttacgtcgactggctctccacgctcaccaacaattctccc
gagctcgtgatcaccgctatgctcgccattttcgctctggtccacagtggcctggccagt
tttcgcgaccgaggcgagcagctcatcggcgagagggcgtaccgagttgtttttgctgga
ctgtcgcttccgctggcagtttctgccgtggtgtattttatcaaccatagatacgaaggt
gcgcagctatggcacgtccaagacgttcctggagtccatcagctggtgtggcttctctcg
tttacgtcattcttcttcctctatccgtccacgtttaatctgctcgaagttgctgctgtc
gacaagcccaagcttcatatgtgggagactgggatcatgagaatcacccggcatccccag
atggttggacagttcatgtggtgttttgctcacacgctatggatcggcagctccttcacg
ctgaccacgtccatcgggcttctcgctcaccaccttttcggagtgtggaacggtgacaga
cgactttcccttcgctacggcgacgccttcgaggccgtgaggcagagaacgagtgtagtg
cccttcgtggctatagctcaaggccgacagaagctgccacgggatttctacaaggaattc
ctgaggctaccttacttgatcatcacagcactgactttgggggcgtatttctcgcacccg
ttgcttcgcttggggagctccagtttgcactggtag
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