Selaginella moellendorffii: SELMODRAFT_140234
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Entry
SELMODRAFT_140234 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20222
importin-5
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_140234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_140234
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
SELMODRAFT_140234
Pre-60S particles
SELMODRAFT_140234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_6
HEAT
Importin_rep_4
TOR1L1_N
HEAT_2
MMS19_C
IFRD
Vac14_Fab1_bd
HEAT_EF3_N
Cnd1
INTS7_N
Arm
Htt_N-HEAT_1
UME
DOP1_C
RTP1_C1
ARM_ARMC5
ARM_ECM29_C
IBN_N
PP4R3
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
9633055
NCBI-ProteinID:
XP_002961337
JGI:
140234
UniProt:
D8QP56
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MEAEVAAVLGMEMAPFEALVAQLMSPTNDQRGHAEQLFNACKAQHPDTLVLKLVHTLQSG
HVETRAMSAILLRKLITKDEVSLWSLLNPNTHSTLKTQLLVCVQREETKSTLKKLCDTVA
ELAASLIEDGSWPELLPFMFQCVSSDVPRLQESALLMFAQLAQYMGPHLRSHLPTLHAVF
QQCLSSNTSSDVRIAALRATASFVQTLESVQDRERFQNLLPGMMQTLSLALNNNEEATAQ
EALEMFIEVAGSEPRFMRRQLVDVVSTMMQIAEAESLEEGTRHLAVEFLITLAEARERAP
GMMRKLPQMISRLFATLVKMLLDLEDLPAWHVADTEDEDVGESSNFEVGQECLDRLAISL
GGNTILPVASDILPVYISDPDWKKRHAALITLAQIAEGCAKVMIKNLEPVVSMILNSFQD
PHPRVRWAAINAIGQLSTDLGPDLQQLYHQRVLPALVGAMDDYQNPRVQAHAAAAILNFS
ESCTSDILTPYLEGVIGKLLILLQNGKRMVQEGALTALASVADSAQVQFQKYYDAVMPYL
KTILINATDKQNRMLRAKSMECISLVGMAVGKDKFRDDAKQVMEVLMTLQGAHLEDDDPT
ISYMLQAWARLCKCLGQEFLPYMNVVMPPLLRSAQLKPDVTITDADTEDEGNDTDDDSVE
TITIGDKKIGIRTSVLEEKATACNMLCCYADELKEGFFPWIEQVAPILVPLLKFYFHEEV
RKAAVSAMPELLRSGKLAVEKGQAQGRDQTYVKQLTDYIVPPLIEALRKEPETEIISSML
DSLNECIQLVGPMLDQGQIKAIVEEFKQVLTASSTRKRDRAERTKTEDFDAEERELLHEE
NEQEDEVFDQIGECIGTLIKTFKASFVPFFDELMPFVTPMLSKDRTSEERRIAICIFDDI
AEQCGEAAIKYYDTFLPFMLEAANDVNCDVRQAAVYGIGVCAEFGGAKFKPVVREALERL
NAVVSHPAARQQDNIMATDNAVSALGKICQFQRDSIDATQVVPAWLGCLPLKGDLVEAKI
VHEQLCSMVESSDPQLLGPNNQFLPKIVSVFAEVLSSGAELSNEQTAARMVTLLRQMQQR
LPPAALASTWSALQPQQQAALQSILSPQTS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggaggtcgcagctgtgctggggatggagatggcgccattcgaggcgctcgtc
gcccagctgatgagccccacgaacgaccagcgcggccacgccgagcagcttttcaacgct
tgcaaggcgcagcacccggacacgctggtgctcaagctcgttcacactctacagtccggg
catgtcgagacgcgcgctatgtccgctatcctcttgcggaagctcatcaccaaggacgag
gtctcgctctggtcgctgctcaatcccaacacccactccacgctcaagacccagctcctg
gtgtgcgtccagagggaagagaccaagagcaccctcaagaagctgtgtgacactgtggcg
gagctagcggccagtttgatcgaggatgggagctggccagagctccttccattcatgttc
cagtgcgtgagctccgacgttcccaggctccaggagagcgcgctgctcatgtttgcccag
ctcgcgcagtacatgggacctcacctccgctcacacttgccgactttgcacgcggtcttc
cagcagtgcctgtcgtccaacacctcgagcgacgtgcgcattgcggcactccgcgcgacc
gccagcttcgtgcaaacgctggaatcggtccaggatcgagagaggttccagaacttgcta
cccggaatgatgcagacgctgtctctggctctaaacaacaacgaggaggccacagcgcag
gaggctcttgagatgtttatcgaggttgccgggtcggagccaaggtttatgcgacgccag
cttgtggatgtggtgagcaccatgatgcagatcgctgaggctgagtcgctcgaggagggt
actcgtcacttagcggtggagtttttgatcactctcgctgaggccagggagagggcgccg
gggatgatgcggaagttgccacaaatgatcagcaggcttttcgcgacactggtgaagatg
ctcttggatttggaggaccttccggcgtggcatgtcgctgacacggaagatgaggacgtt
ggagagagctcgaattttgaagttggtcaggaatgcttggacaggttggcgatctctctg
ggggggaacacgatcctgccggttgcatcggacatcctgcccgtttacatttctgatccg
gactggaagaagaggcatgccgcgttgatcacccttgcacagattgccgaaggatgtgcc
aaggtgatgataaaaaatttagagccggtggtgtccatgattttgaattcgtttcaagat
ccacatccccgagttagatgggctgctattaatgcgatcggacagctctccacagattta
ggacctgatttgcaacagctctatcatcagcgggtgcttccagctcttgttggtgccatg
gatgactaccaaaatcctcgggttcaggctcacgcggcagccgcaatattgaattttagc
gaaagctgtacttctgatattttgacgccttatttggaaggtgtcatcggtaaattgttg
attcttttgcagaatggaaaaagaatggtgcaagaaggtgctttgacagcactagcttct
gtcgctgattccgcccaggttcaattccaaaagtattacgatgcagtcatgccgtacctg
aagactattcttataaatgccacagacaagcaaaaccgcatgcttagagcgaagtctatg
gagtgtatcagccttgtaggtatggccgtcggcaaagacaagttcagagatgatgcgaag
caggtgatggaagttctgatgaccctccagggtgcgcacttggaggatgacgatccaacc
attagctacatgttgcaggcttgggctcggctatgtaaatgtttgggtcaagaattttta
ccgtatatgaatgttgttatgccaccccttctgcgctctgcgcaacttaaaccagacgtg
accataacggatgcggacaccgaggacgaagggaacgatacagatgacgacagtgtggag
acaatcactatcggggacaagaaaattggtatcagaacaagcgttctggaagaaaaggca
acagcttgtaatatgttgtgttgttatgcggacgaactcaaggaagggttctttccgtgg
atcgagcaggtcgcgccgatccttgtacccttattgaagttttactttcatgaagaagtt
cgaaaagccgccgtttcagctatgcctgagcttctgaggtctggtaagctggctgtggag
aaaggacaagcacaagggcgggatcaaacttatgtgaagcaactcacggactacatagta
ccgcctcttatcgaagctctccgcaaggagcccgagactgaaataatttctagtatgctg
gactccttgaatgagtgtattcagcttgttggtccaatgctcgatcaagggcaaataaaa
gctattgttgaggagttcaagcaagtgttgacagcgagcagcacacggaaaagggatcgt
gcggaacgaacaaagacagaagattttgatgcagaagagcgtgagttgctacacgaagaa
aacgaacaggaagacgaagtttttgatcagattggggaatgtattggaacactcatcaaa
acgttcaaagcgtcttttgttcctttctttgacgagctcatgcctttcgtgacacctatg
ctgtctaaagatcgaacatctgaagaacgaagaatcgcaatttgtatttttgacgacatc
gccgagcagtgcggagaagctgcaatcaaatactatgatacattcctgccgttcatgctg
gaagcagccaatgacgtcaattgcgatgtccgacaggctgccgtatacggcattggtgta
tgtgctgagtttggtggagcaaaattcaagcctgttgtccgagaggctttggagcgtttg
aatgctgttgtaagccatcccgctgcgcggcaacaggataacatcatggcaaccgataat
gctgtgtctgctcttggaaaaatatgtcagttccaaagagatagcatcgatgctacacag
gtcgtccctgcttggttgggctgtttaccactcaaaggtgaccttgtagaagccaaaatt
gtccacgagcagctctgtagcatggttgaaagctcggatccccaacttctcggccccaac
aatcagtttctaccaaagatcgtctccgtttttgcagaggtgcttagctcgggagcagag
ctatcaaacgaacaaactgctgcacgcatggtgactttgctgagacagatgcagcaaaga
ctccccccggctgctcttgcttcgacatggtctgcgttgcaacctcagcagcaggctgcg
ctacagtcgattttgtcacctcaaacatcgtga
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