Selaginella moellendorffii: SELMODRAFT_140536
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Entry
SELMODRAFT_140536 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14007
protein transport protein SEC24
Organism
smo
Selaginella moellendorffii
Pathway
smo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_140536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_140536
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
SELMODRAFT_140536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
FYVE_2
Motif
Other DBs
NCBI-GeneID:
9630463
NCBI-ProteinID:
XP_002962022
JGI:
140536
UniProt:
D8QRN3
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MPPQAPPDGSFIRPPPYGSAPPPPLPGSQAAAPPPGAGATPVPQYGASNQPGMVGFRPQY
GGSLRPPPPFQGMAPPSRPFQGPGVGSGQEISSFQANSGMPAPFQSQSASIQGPPQFQGP
PPSFQSSIQGPPSFQSHPSSIQGQPPQPFQSHPQAPPQPLQMQGPPLQPPQFLSRPPGPG
YSQMPPPPGQNWRPSVSIGLFGESSLMLQPGSPSTTPSQRIDPSQIPRPQPSFATSVYDT
VSSGPIPPSSTSDFYVRDAGNCSPRIMRSTLYQVPCTADLLNTSKMPLALIIQPLALPHV
NEEPIKVVDFGESGPVRCNRCKAYINSFMKFIDQGRRFVCNICGHTNETPRDYVCNLGPD
GRRRDADDRPELSRGTVEFVATQEYLLRPPMPPVFFFLVDVSANAIKTGAAAAACSAIQR
VLADIAEGPRTMVGVATFDSTIHFYNLSKDLQQPSMLVVPDIQDVYVPVENGLVVPVAEG
REHMETLLENIPNMFHDNVVQESALGAAMKGSFLALKPTGGKLLVFQSVLPSIGLGALTP
REAEARDKSAEAHKVLQPADKTLKAMAEEFSSSQVCVDLFLTTQTYVDIASLSVVPITTG
GQAYYYFPFSATMDSAKLYNDLRWNLTRPQGLEAVMRVRCSQGIKVQDYFGSCKRVTTDV
DLPAIDCDKSILVTFKHEDKFQEGADCCFQSALLYTTVDGHRRIRVSTLSLTCTNVLSNL
FKGADLDAQFTYLLKTAAQGVPVSPLSQVREQTIGQCVQSLFSYRKFCATASSSGQLILP
ECLKLLPLYTLALTKSVGLRQDVRVDERAYWLMRATSISASLAIPLVYPRLFSVHNIPKV
LLDESSLPPTLPLSSENLDPEGIFLLETGEDAFLYAGKAVSSELLHQLFEVRSVNEVIPG
QFLLQEYDNEPSILLNKMVNEIRRQRCSYLRLHLLKRGDPLEMMFHSFMIEDKSGLGSSY
VEFLVYVHRQIQVKMQSGS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcaagctccccccgatggatccttcatccggccgccaccgtatggatctgcg
ccgccaccgccgctgccgggatctcaggccgctgctcctcctcccggagctggagctacg
ccagtgccacagtatggcgcgtcgaatcagccgggcatggtaggttttcggccacagtat
ggcggatctctgcgacctccgcctccattccaaggtatggcgccgccttctcgtccattc
cagggcccgggagtgggatcaggacaggaaatttcgagcttccaggcgaattcaggcatg
ccggcgccattccagagccagtcggcgtcgatccaagggcctccccagttccagggccct
cctccatcgttccagagctcaatccaggggcctccatctttccagagccacccctcctcg
atccagggacagccgccgcagccattccagagccatcctcaagctcctccacagcctcta
cagatgcaaggacctcctctccagcctccacagtttctaagccggccgccagggcctggt
tactcgcaaatgccgcctcctcctggccagaattggagaccctctgtgagtatcgggctt
tttggagagagctctctaatgcttcagcctggctctccctctacgactccttcgcaacgc
attgatccatcgcaaattccccgcccccagccgagcttcgctacgtccgtttatgataca
gtttctagcggtccaattcctccgtcttcgacgagtgatttttacgtgagagatgccgga
aactgtagcccaaggattatgcgaagcactctttatcaggttccatgcaccgcggatttg
ctaaacacctcgaaaatgcctctggctctgataattcagccactcgccctccctcacgtg
aatgaagagcctatcaaggttgttgactttggagaaagtgggccagttcggtgcaataga
tgtaaagcatacattaattcctttatgaagtttatcgaccaaggacgccgttttgtttgc
aatatttgtggacacacaaacgaaactccgcgagattacgtttgcaacctcggaccggat
ggacgaaggagagacgctgacgacaggcctgaactctctcgtggaacagtcgagttcgtt
gcaacccaagagtatttgcttcgacctccaatgccaccagtgttcttctttctggtggat
gtctcagctaatgctatcaagacgggagcggccgccgcagcttgcagtgctattcagaga
gttctggcggatattgcagaaggtcctaggacaatggttggagttgcaacgtttgattca
actatacacttctacaatttgagtaaagacctgcaacagccatccatgctcgtagtgcca
gacatacaagacgtatatgttccagttgaaaacggacttgtggttcctgtcgctgagggc
cgcgagcacatggaaactcttttggagaacatacccaacatgtttcatgacaacgtggtt
caggaatcagctcttggtgcagcaatgaaggggtcatttctggctttgaaacctactggg
ggaaagctcttagttttccaatcagttttaccatctattggccttggagctttaacccca
agggaggcagaggcgcgagacaaatctgcggaagcgcacaaggtgttacaacctgcagat
aaaactttgaaagccatggcagaggagttttcttcgtcccaggtttgcgtggacttgttt
ttgacaacccaaacatacgtcgatatagcatcactttcagttgtgcccatcacaactgga
ggtcaagcttattattattttcccttctctgctaccatggattcagctaagttgtataat
gatttacgatggaacttaaccagacctcaaggacttgaagccgtgatgcgtgtgcgatgt
agtcagggaatcaaagtccaggactactttggcagctgtaaacgggttaccactgatgtc
gatcttcctgcgattgattgtgataaatctattctggtcacgttcaagcacgaagacaaa
ttccaagaaggagcggactgttgttttcagtcggcgttactctacaccacggtcgatggg
catagacgtatcagagttagtacactatcacttacctgcacgaacgttctgagcaacctt
ttcaaaggcgcggatctagatgcacagttcacttatcttttgaaaactgctgctcaaggc
gtgcctgtctcccctctttcgcaagttagggagcaaaccattggacagtgcgttcagagc
ttgttttcgtatagaaagttttgcgcaactgcatcttcttcgggccagcttatcttgccc
gaatgccttaagctgctaccgctatatacactcgctcttacaaagagcgtgggtctccgg
caagatgttcgtgttgatgaacgagcttactggcttatgcgagctacaagcatctcggca
tccctcgcgataccgttggtgtatcccagactattttccgtccacaacataccaaaggta
ctactggacgagtcgagtctaccaccgacgcttcctctatcaagcgagaacctggaccca
gaaggaatctttcttttggagaccggtgaggacgcttttctatacgcagggaaggctgtc
tcctctgagctccttcatcaactctttgaagtgcggtctgtgaacgaagtgattcccgga
cagtttttgttgcaagagtacgataacgagccatcaattttgctgaacaagatggtgaac
gagatccgtcgccaacgctgctcttacctgcggttgcatttgctgaagcggggagatcct
ttagagatgatgttccactccttcatgatcgaagacaagagcgggctgggctcgtcttat
gtggagttccttgtctacgtgcacaggcaaatccaggtaaaaatgcagtctgggagctga
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