Selaginella moellendorffii: SELMODRAFT_141141
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Entry
SELMODRAFT_141141 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_141141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_141141
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_141141
Messenger RNA biogenesis [BR:
smo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SELMODRAFT_141141
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
RNases
SELMODRAFT_141141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
9662002
NCBI-ProteinID:
XP_002962448
JGI:
141141
UniProt:
D8QUP6
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTENLFSALTLIDDEDDLGQLGGGGGGSSSSRIPLPLGDAGRKNGSSLATIAGEFVSRPL
VWIDLEMTGLDVCKDRILEIACIITDGKLTKSIEGPNLVIHQSDEILKGMGEWCQTHHAA
SGLTERVQNSKVTEAHAEMLVLKFVQKYTIAGYAQLAGNSVYNDLNFLRKYMPTLAAHLS
HVIVDVSSIKSLCKRWYPRDAERAPKKAKSHRALDDIRESIKELEYFKRTIFKDKR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaatctcttctccgcgctcactctcattgacgatgaggacgatctcggtcag
ctcggcggtggcggcggcggcagtagcagctctcgaattcctctcccgctcggcgatgcg
gggagaaagaatggctcctcgctcgctacaatcgccggggagttcgtgagccggcctctt
gtgtggattgatctcgaaatgactggattggatgtttgcaaggataggattttggagatt
gcgtgtatcatcactgatggcaagctaacaaagagcattgagggaccgaatttggtgatc
catcaatccgacgagattttgaaaggcatgggagagtggtgtcaaacacaccatgcagct
agtggacttactgaaagggtgcaaaatagcaaagtaaccgaggcacacgctgaaatgctg
gttctcaagttcgtccagaagtacacgatcgctggctacgcacagctcgccgggaattcg
gtctacaacgatctaaacttcctccgaaagtacatgccgacgctagcagcgcatctctcc
cacgtaatcgtcgacgtgagctcgatcaaatcgctgtgcaaacgctggtaccctcgagac
gccgaaagggctccaaagaaagcaaagagccaccgagcgctggatgatatcagggagagc
atcaaagagctcgagtatttcaaaaggacgatttttaaagacaagcgctaa
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integrated database retrieval system
