Selaginella moellendorffii: SELMODRAFT_141846 Help Entry SELMODRAFT_141846 CDS       T01496                                  Symbol COP1L1-1 Name (RefSeq) hypothetical protein   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism smo  Selaginella moellendorffii Pathway smo04120   Ubiquitin mediated proteolysis smo04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:smo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     SELMODRAFT_141846 (COP1L1-1)  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     SELMODRAFT_141846 (COP1L1-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:smo04121]     SELMODRAFT_141846 (COP1L1-1) Enzymes [BR:smo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      SELMODRAFT_141846 (COP1L1-1) Ubiquitin system [BR:smo04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     SELMODRAFT_141846 (COP1L1-1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      SELMODRAFT_141846 (COP1L1-1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 WD40_like Beta-prop_DCAF12 WDR90_beta-prop_4th eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st NCH4 Plasmid_RAQPRD Motif Other DBs NCBI-GeneID:  9655312 NCBI-ProteinID:  XP_002963783 JGI:  141846 UniProt:  D8QWL1 LinkDB All DBs Position Unknown AA seq 560 aa AA seqDB search MCIMTHLNIKSNCPCCGAYLTSGQLYPNFLLNKILRKASVCQVASSASPGEHLRLALKQG ADISMKDIDTLLSLLTEKKRKAEREEAETNLEVLHDFLQRSRQQKQQELNEIQTDLQWLK EDIAAVEKQATSLKKSKERHASPVHQKLPSSRCRAKASEAEGRSPDGEKARLKRAQTDDE GTSGVRESEVLSKKRRVLSQFEDLQDCYLQKRKQSQDPSETGESLSSHATGLEDFQAVLN SFTRYSQLRVVAEVRHPDLFQNSNIVSSIEFDRDDEFFATAGVSRRIKVFEYSAVVNSSA DVHYPAMEIPSRAKLSCLSWNKCIKHHIASSDYDGSVTIWDVNNAQSIMEYEEHAKRAWS VDFARTDPNLLVSGSDDGKLKVWSTRQESSVMGIDMKANICCVKFNPSSSNFVAVGSADH RIHYYDLRSPASPVHTFSGHQKTVSYVKFITPEELVSASTDSTLRIWNVRTNTPIRTLTG HINERNFVGLSGNSDYVTCGSETNEVFVYHKAISRPATRHRFGSLDDSLHFISAVCWKSD SPTLLAANSQGTIKVLVMAA NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgtgcatcatgacgcatctaaacatcaagagcaactgtccctgctgtggagcttacttg accagcggccagctctacccaaatttccttctcaacaagattttgaggaaggcgagtgtg tgccaagttgccagctctgcgtcaccgggagagcacctgcggcttgctctcaaacaggga gcagacatctcgatgaaagacatcgatacacttttgagtttgttgactgaaaagaaacgc aaggccgaacgggaggaggctgaaacaaatttggaggtcttgcatgatttcttgcagcgg tcaaggcaacagaagcagcaagagttaaacgagatacaaacagacctgcaatggctcaag gaagacattgctgctgttgaaaagcaggcgactagcttgaagaaatccaaagaacgtcat gcgtcgcctgttcaccaaaagcttcctagctctcgctgtcgcgccaaggcgtccgaagcg gaagggagatccccggatggagaaaaagctcgtcttaagcgagcgcaaactgatgacgag ggaacgtctggagtgagagaaagtgaggttctttcgaaaaagaggcgagtgctttctcag tttgaagacctgcaagattgttatttgcaaaagcgaaagcaatcacaagatcctagtgag acaggcgagagcttgtcgagtcatgccacaggattggaagacttccaagccgttcttaat tctttcacgcgatacagccagctccgggtggtcgctgaagtacgacatcctgatcttttc cagaattccaatatagtctccagcatagagtttgacagggacgacgagttcttcgctact gcgggagtgtcccgtaggataaaagtgttcgagtactctgccgttgttaatagcagcgcg gacgtgcattatccggcgatggagatcccttcgcgtgcgaagctcagctgcctcagctgg aacaaatgcatcaaacaccacattgcgagcagcgactacgatgggagtgtcaccatatgg gacgtgaataatgcgcagagtatcatggagtacgaagagcatgccaagcgagcgtggagt gtcgattttgctagaaccgatcccaatttacttgtttctggcagtgacgatggcaagctc aaagtgtggtctactcgacaggagagcagcgtcatgggaatcgacatgaaagccaacatc tgctgcgtcaagttcaatcccagctccagcaattttgtagcggttggatcggccgatcac cgcatacattactacgatttgcgctctcctgcttcgccagtccacacctttagcggccac caaaagaccgtctcgtacgtgaagttcatcacgccggaggagctcgtgtccgcatcgact gatagcaccttgcggatctggaatgtcagaaccaacactccgattagaacgctaactggg catatcaacgagaggaacttcgttggtttgagcggtaacagtgactacgtaacctgtgga agtgaaaccaacgaagtgttcgtgtatcacaaggcgatctctagaccagcaactcgacac cgatttggaagcttagacgactcattgcatttcatcagcgccgtgtgttggaagagcgac agtccaactttgttagccgccaatagccagggaaccatcaaagttctagttatggccgcc taa

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