KEGG   Selaginella moellendorffii: SELMODRAFT_144528
Entry
SELMODRAFT_144528 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_144528
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_144528
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_144528
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SELMODRAFT_144528
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SELMODRAFT_144528
SSDB
Motif
Pfam: Nup96 Nucleoporin2 L544_helical
Other DBs
NCBI-GeneID: 9631864
NCBI-ProteinID: XP_002967335
JGI: 144528
UniProt: D8R7T5
LinkDB
Position
Unknown
AA seq 993 aa
MPKLKHSDYYTEPRVQELAAKERAEPGYCRRVSDFIVGRKGYGHIKFLGETDVRRLDIEG
IIQFNKCEVLVYMDESKKPPLGQGLNKPAEVTLLNVMCIDKSTGRSVTDGAQVERFEKKL
KKKTQAQGAEFVSFDALKGEWTFRVKHFSRYAFDESEDSEDDALESGKLVPALMEDVRSR
NHRTALPHSLPAQLKLDPLKLHQLKASFFPLDENESAEMTDVGTYKKSTPPSVIKQYKSS
LEEGELKRPSKQIKLSPHSLWQRSPMLLPQQSSFQALTAPTPSLVKTSRKLTSGFRLQES
DSEKLLSTSNSGGGVVDAALFMGTSFRAGWGPNGVLVHSGSSVGQSKATTVVSSSIKLET
VSLDRTARDDRGKVKDILLDFQFNAPLALHMSLSKVVSESNGLKLRSLVCSKDQLERLTN
DYEDLIEKQHGTPGVSAADQLVLKHQVLAWQLICVLFSEKDALVTETEEASESMAEMKAR
IANIDPGTETLVRKAAFSGWLQDSVFHLVQADLDSTGKDASHIRDIMVLLTGKQVELGVR
KAILAGDVRLACLLSQGGGLVANREDILSQLEVWESEGLCDGLIENDRISLFKLLGGDIH
GSLGDQEIDWKRFMGMLMWYTLPPEAGLPDIILEFQRLVEEGDAFKPVPMYIEEAPVEVK
EAPAPPPAYDSAYYLMLLHARGSLDESDVNKMFSSSASTFDRLDHRAAWHQKEVLQAIGV
LNQSDSYALDMSFISQLLAAKLIHWAVYVVLHMPVCPETTGLHEKVIKDILSQYCEVWSN
SEVQQKFIEDELGIPPEWLHETLAIYWLYRGDFEKSLVHYLKSFMWQEAHVVFMTKVSAS
LLLNGKKEEIWSYASQMDAHKMEIENWDIGSGLYIDFFTLLGSFENSEAYDTELESPVEA
KMCACKDFFERLKESQRLWEAKASKLLRLALTRMADEVAALLVSESKVKRVDASVEMEIQ
SVAMEAGSPEDVQLCRLQGAVSSFSNWIVQIAA
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgccgaaactcaaacactctgattattatacggaaccgagggtgcaagagctggcagct
aaagagcgtgcagaaccaggatactgccggcgagtgtctgattttatagttggccgaaaa
ggatacggtcacatcaaatttcttggagagacagatgtcagacgccttgatatcgaaggg
atcatccagttcaacaagtgtgaagtgctggtctatatggatgagagtaagaagcctcct
ctcggacagggattgaacaagcctgcggaggtcactcttttaaatgtcatgtgcattgac
aaatctactggacgcagcgtcacagatggggcacaagtggaacggtttgaaaagaagttg
aagaagaaaactcaagcgcagggtgcagagttcgtttcttttgatgccttgaaaggtgaa
tggacatttcgagtgaagcacttcagccgttatgcttttgatgagtcggaggactcggag
gacgatgctttggaatctggaaaactggttcccgctctcatggaggatgtgagatcaagg
aaccatagaacagctctgcctcattcattgcccgcgcagcttaaactggatccattgaag
ttgcaccagctcaaagcatcgttctttcccctggatgaaaacgagtcggcagaaatgact
gacgttggtacctacaagaaatcaactccgccgtcggttatcaagcagtacaagtccagt
ttggaagaaggcgagttaaaacgtccatcgaagcagataaagctgagtcctcattcacta
tggcaacggtcaccaatgcttctgccgcagcaatcgtccttccaggctcttactgctcca
acgccatcactggtgaagacttcgagaaagctaacgtctggtttccggcttcaggaatct
gacagcgaaaaacttctgtccacgagcaattcgggtggtggtgttgtcgatgctgcactt
ttcatggggacctctttccgtgccggttggggtccaaacggagtgttggtacattctggt
tcctctgtgggccagtccaaagcgactacggtggtttcgtcctccataaaacttgagacg
gtttctctcgacagaactgcaagagacgatcgaggtaaagtcaaggatatccttcttgat
tttcagtttaatgctcctctcgcgctgcacatgtccctgagcaaggttgtgagcgaaagt
aacggcttgaagctgcggagcttggtttgtagcaaggatcagctagaaaggctcaccaac
gactacgaggacctgatcgaaaagcagcatggtactccaggtgtatccgcagctgatcag
ctggttttaaagcatcaggtgctggcatggcagctcatctgtgttctcttctcggagaag
gatgctctggtcaccgaaaccgaagaggcttcagaaagcatggctgagatgaaagcccgt
atagcgaacatcgatccgggaactgaaactctagtgcgcaaggctgcatttagtggctgg
ctacaggatagcgtctttcatctggtccaggccgacttagactcaaccgggaaggacgcg
agccatatcagggatataatggtcttattaactggcaaacaggtggagctgggtgtgaga
aaggccatccttgcaggggacgttcgtttggcgtgcctgctgagccagggcggtggactg
gtggcaaacagggaggatatcttgtcgcagttggaggtctgggagtcggagggactttgc
gacggtctcatcgaaaatgacaggatatcgctgttcaagctgcttggaggagatatccac
ggttctctcggcgatcaagagattgactggaagcgcttcatggggatgttgatgtggtac
acgctgcctcctgaggctgggcttccggacatcatcctcgagtttcaacgccttgttgag
gagggagacgcgtttaagccggttcccatgtacattgaagaagcaccagtggaggtcaag
gaagctccagcaccaccgccggcctatgacagcgcttactatctcatgcttttgcatgcg
agagggagccttgacgaatcagatgtgaacaagatgttttcctcctcggcatctacattt
gatcgtctggatcaccgggccgcttggcatcagaaggaagttctccaggcaattggcgtt
ttgaatcagtcggattcctacgcgctggacatgagttttatctcccagcttcttgccgcc
aagttgatacattgggcagtttacgtggtactccatatgccagtgtgcccggaaactaca
ggtttgcacgagaaggtgatcaaggatatactgagccagtactgtgaagtttggagcaac
tcggaggttcagcagaagtttatagaggacgaactcggtattccaccggagtggctgcac
gagactttggctatctactggctgtaccggggagactttgagaagagccttgtgcattac
ctcaaaagcttcatgtggcaagaggctcacgtcgtgtttatgaccaaggtgtccgcatct
ttgctgctaaatgggaaaaaggaagagatttggagctacgcgagccagatggatgcgcat
aaaatggagatcgagaactgggacattggctccggcttgtacatagacttctttactctc
ctggggtccttcgagaacagcgaggcttatgatacagagctggaatctcctgtggaagcc
aagatgtgtgcgtgcaaggacttcttcgagaggctcaaggagtcgcaacgattgtgggaa
gctaaagcttcgaagctactgaggcttgcgttgacgaggatggccgatgaagtggcggcg
ctcctggtgagtgagagcaaagttaagcgcgtggatgcgtcagtggagatggaaatccag
agcgtcgcgatggaggctggaagtcccgaagacgtccagctttgccgcctccaaggagcc
gtgtcaagcttctccaactggatcgtccaaatcgccgcgtga

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