Selaginella moellendorffii: SELMODRAFT_144528
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Entry
SELMODRAFT_144528 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_144528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_144528
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_144528
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SELMODRAFT_144528
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SELMODRAFT_144528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
L544_helical
Motif
Other DBs
NCBI-GeneID:
9631864
NCBI-ProteinID:
XP_002967335
JGI:
144528
UniProt:
D8R7T5
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MPKLKHSDYYTEPRVQELAAKERAEPGYCRRVSDFIVGRKGYGHIKFLGETDVRRLDIEG
IIQFNKCEVLVYMDESKKPPLGQGLNKPAEVTLLNVMCIDKSTGRSVTDGAQVERFEKKL
KKKTQAQGAEFVSFDALKGEWTFRVKHFSRYAFDESEDSEDDALESGKLVPALMEDVRSR
NHRTALPHSLPAQLKLDPLKLHQLKASFFPLDENESAEMTDVGTYKKSTPPSVIKQYKSS
LEEGELKRPSKQIKLSPHSLWQRSPMLLPQQSSFQALTAPTPSLVKTSRKLTSGFRLQES
DSEKLLSTSNSGGGVVDAALFMGTSFRAGWGPNGVLVHSGSSVGQSKATTVVSSSIKLET
VSLDRTARDDRGKVKDILLDFQFNAPLALHMSLSKVVSESNGLKLRSLVCSKDQLERLTN
DYEDLIEKQHGTPGVSAADQLVLKHQVLAWQLICVLFSEKDALVTETEEASESMAEMKAR
IANIDPGTETLVRKAAFSGWLQDSVFHLVQADLDSTGKDASHIRDIMVLLTGKQVELGVR
KAILAGDVRLACLLSQGGGLVANREDILSQLEVWESEGLCDGLIENDRISLFKLLGGDIH
GSLGDQEIDWKRFMGMLMWYTLPPEAGLPDIILEFQRLVEEGDAFKPVPMYIEEAPVEVK
EAPAPPPAYDSAYYLMLLHARGSLDESDVNKMFSSSASTFDRLDHRAAWHQKEVLQAIGV
LNQSDSYALDMSFISQLLAAKLIHWAVYVVLHMPVCPETTGLHEKVIKDILSQYCEVWSN
SEVQQKFIEDELGIPPEWLHETLAIYWLYRGDFEKSLVHYLKSFMWQEAHVVFMTKVSAS
LLLNGKKEEIWSYASQMDAHKMEIENWDIGSGLYIDFFTLLGSFENSEAYDTELESPVEA
KMCACKDFFERLKESQRLWEAKASKLLRLALTRMADEVAALLVSESKVKRVDASVEMEIQ
SVAMEAGSPEDVQLCRLQGAVSSFSNWIVQIAA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaactcaaacactctgattattatacggaaccgagggtgcaagagctggcagct
aaagagcgtgcagaaccaggatactgccggcgagtgtctgattttatagttggccgaaaa
ggatacggtcacatcaaatttcttggagagacagatgtcagacgccttgatatcgaaggg
atcatccagttcaacaagtgtgaagtgctggtctatatggatgagagtaagaagcctcct
ctcggacagggattgaacaagcctgcggaggtcactcttttaaatgtcatgtgcattgac
aaatctactggacgcagcgtcacagatggggcacaagtggaacggtttgaaaagaagttg
aagaagaaaactcaagcgcagggtgcagagttcgtttcttttgatgccttgaaaggtgaa
tggacatttcgagtgaagcacttcagccgttatgcttttgatgagtcggaggactcggag
gacgatgctttggaatctggaaaactggttcccgctctcatggaggatgtgagatcaagg
aaccatagaacagctctgcctcattcattgcccgcgcagcttaaactggatccattgaag
ttgcaccagctcaaagcatcgttctttcccctggatgaaaacgagtcggcagaaatgact
gacgttggtacctacaagaaatcaactccgccgtcggttatcaagcagtacaagtccagt
ttggaagaaggcgagttaaaacgtccatcgaagcagataaagctgagtcctcattcacta
tggcaacggtcaccaatgcttctgccgcagcaatcgtccttccaggctcttactgctcca
acgccatcactggtgaagacttcgagaaagctaacgtctggtttccggcttcaggaatct
gacagcgaaaaacttctgtccacgagcaattcgggtggtggtgttgtcgatgctgcactt
ttcatggggacctctttccgtgccggttggggtccaaacggagtgttggtacattctggt
tcctctgtgggccagtccaaagcgactacggtggtttcgtcctccataaaacttgagacg
gtttctctcgacagaactgcaagagacgatcgaggtaaagtcaaggatatccttcttgat
tttcagtttaatgctcctctcgcgctgcacatgtccctgagcaaggttgtgagcgaaagt
aacggcttgaagctgcggagcttggtttgtagcaaggatcagctagaaaggctcaccaac
gactacgaggacctgatcgaaaagcagcatggtactccaggtgtatccgcagctgatcag
ctggttttaaagcatcaggtgctggcatggcagctcatctgtgttctcttctcggagaag
gatgctctggtcaccgaaaccgaagaggcttcagaaagcatggctgagatgaaagcccgt
atagcgaacatcgatccgggaactgaaactctagtgcgcaaggctgcatttagtggctgg
ctacaggatagcgtctttcatctggtccaggccgacttagactcaaccgggaaggacgcg
agccatatcagggatataatggtcttattaactggcaaacaggtggagctgggtgtgaga
aaggccatccttgcaggggacgttcgtttggcgtgcctgctgagccagggcggtggactg
gtggcaaacagggaggatatcttgtcgcagttggaggtctgggagtcggagggactttgc
gacggtctcatcgaaaatgacaggatatcgctgttcaagctgcttggaggagatatccac
ggttctctcggcgatcaagagattgactggaagcgcttcatggggatgttgatgtggtac
acgctgcctcctgaggctgggcttccggacatcatcctcgagtttcaacgccttgttgag
gagggagacgcgtttaagccggttcccatgtacattgaagaagcaccagtggaggtcaag
gaagctccagcaccaccgccggcctatgacagcgcttactatctcatgcttttgcatgcg
agagggagccttgacgaatcagatgtgaacaagatgttttcctcctcggcatctacattt
gatcgtctggatcaccgggccgcttggcatcagaaggaagttctccaggcaattggcgtt
ttgaatcagtcggattcctacgcgctggacatgagttttatctcccagcttcttgccgcc
aagttgatacattgggcagtttacgtggtactccatatgccagtgtgcccggaaactaca
ggtttgcacgagaaggtgatcaaggatatactgagccagtactgtgaagtttggagcaac
tcggaggttcagcagaagtttatagaggacgaactcggtattccaccggagtggctgcac
gagactttggctatctactggctgtaccggggagactttgagaagagccttgtgcattac
ctcaaaagcttcatgtggcaagaggctcacgtcgtgtttatgaccaaggtgtccgcatct
ttgctgctaaatgggaaaaaggaagagatttggagctacgcgagccagatggatgcgcat
aaaatggagatcgagaactgggacattggctccggcttgtacatagacttctttactctc
ctggggtccttcgagaacagcgaggcttatgatacagagctggaatctcctgtggaagcc
aagatgtgtgcgtgcaaggacttcttcgagaggctcaaggagtcgcaacgattgtgggaa
gctaaagcttcgaagctactgaggcttgcgttgacgaggatggccgatgaagtggcggcg
ctcctggtgagtgagagcaaagttaagcgcgtggatgcgtcagtggagatggaaatccag
agcgtcgcgatggaggctggaagtcccgaagacgtccagctttgccgcctccaaggagcc
gtgtcaagcttctccaactggatcgtccaaatcgccgcgtga
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integrated database retrieval system