KEGG   Selaginella moellendorffii: SELMODRAFT_144908
Entry
SELMODRAFT_144908 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_144908
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_144908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_144908
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_144908
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     SELMODRAFT_144908
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SELMODRAFT_144908
SSDB
Motif
Pfam: RNA_pol_Rpb4 LETM1_RBD
Other DBs
NCBI-GeneID: 9630865
NCBI-ProteinID: XP_002967835
JGI: 144908
UniProt: D8R9N1
LinkDB
Position
Unknown
AA seq 136 aa
MANEEEDASELKLGEDFLKEKCLMNAEVAKILQHKYDTANQMSDDPSSQLSQVFEKSFAY
VKRFSRYKNPEAVQQVREVLSRNQLAEFEVCVLGNLCPETVEEATALVPSIAKKGRLDDE
RIEQMLADLARIKTFE
NT seq 411 nt   +upstreamnt  +downstreamnt
atggcgaacgaggaggaggacgctagcgagctcaagcttggcgaggatttcttgaaggag
aaatgcctgatgaatgccgaagtggccaaaatcctccagcacaagtacgacactgcgaat
caaatgagcgacgatccttccagtcagttgtcccaagtcttcgagaagtccttcgcttat
gtgaagcgcttcagccgctacaagaatccggaggctgtccagcaagttcgagaagtttta
agcaggaaccagctcgcagagtttgaggtttgcgtgcttgggaatttatgcccagagact
gtcgaagaagccactgctttagtcccgtccatagctaaaaaaggccgcttggacgacgaa
agaatcgaacagatgctcgcggatctcgcaagaatcaaaacattcgagtga

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