Selaginella moellendorffii: SELMODRAFT_146155
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Entry
SELMODRAFT_146155 CDS
T01496
Symbol
UPL3-2
Name
(RefSeq) ubiquitin-protein ligase, UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_146155 (UPL3-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_146155 (UPL3-2)
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
SELMODRAFT_146155 (UPL3-2)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
HECT type E3
SELMODRAFT_146155 (UPL3-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
UNC45-central
MMS19_N
TFIIA
Motif
Other DBs
NCBI-GeneID:
9651459
NCBI-ProteinID:
XP_002968883
JGI:
146155
UniProt:
D8RDD0
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
METRSRKRAEATGRRPPPAQSSSRASKRVRVGASSSSSGAAAAAAAAPPAPAPVAAAAAG
ASSSRSRPSTRRNTASQAGTSVSNSSGEKDDKGKEKEACRNRDARDRAAGASVEADDDDG
GDGVSTLQQNLASASSALHGLLRKLGAGLDEFLPSSTPAHQSSRLKRILSGLKAEGEEGR
QLEALSQLCELLSIGTEESLSSFSVDSFVPVLVSLLNHEYNPDVMLLAARALTHLCDVLP
SSCAAVVHYGAVPCFCARLLSIEYIDLAEQSLQALEKISHEHPAACLRAGALVAVLSYLD
FFSTGVQRVAVSTAANICRQLPSDGVNFVMESVPILTNLLQYQDPKVVDHASLCLTRIAD
SFANSSEKIDVLCSHGLIPLAARLVSVGNPNGAMVPQTSLSASTYTGLIRLLSSCASGSA
SASESLLLLNISSILKDILTGAGLTSTTSVAPSISRLPEQLFEIVNLVNELLPPVPDVGA
APLPNGVDSTSSSKVTQASPRIQLLQDRPELLLGFGADLFPVLVQVYGSSVTSSVRHKCL
AAIHKLLYFSTPEMLHSLSKDTNISSFLAGVLASKDPSVLLTALHITELLMQKLPGVFAK
TFVKEGVVHAIDTLIACEQQLGKTSDSQKTRRATSGRRRSGSTSDVHPDDPGGSSSAPVG
SPPNADSPLHTARLGLLSTAVAKAKFLRGAHFCNGITDGGATESLCRLKSLCSKLTADCT
PEVKGKGKGKAKACGSTTSLSEEQLLAAISGVFGELENGEGVSTFEFVNSGIVSALLNYL
SCGSVDGRSRQQALNRLKNFLAVALSSDIREAPLTVLVRKLQNALGSLERFPVILSHGPR
ATGSTASIAAGLSALTQPFKLRLCRASGEKVLRDYSTNVVLIEPLATLAAIEDFLWSRVK
RHDSSPSSTVAASSDCVSSPPASTTPTASTSTPSRPSTRSRTAAAGSGDATPSKGKGKAK
TFEARATTESRGPETRNAAARRRAAAAAASAAVTKQRAPIDSEDDDADASPVEVEDAVAM
DEDDVSEDEEELFGEEPAEVCVGDRVHDVQLGDSADAGAVATSATTSETPSSFGTGAAGS
STPVLIGTGASGSRATAAVGKGALSFAAAAMAGANASKNSKDRKSLAAVASANVPPKLSF
YLGGKLLNRSLTIFQAIQRQTAMDEDDDERYAAPDHPLGHGRRLWDEVYTITYQRADPTE
KTSPGGASSTKSGVAGSSSQGLDGLQQASLLDAILQGELPCDLDKSSSTYNILLLLRVLE
GLNRLAPRLRAQGVIDAFAEGKVSSLSLSEASTGGASVLQEEFLSSKLTPKLARQMQDAL
ALCSGGLPAWCHQLTKACPFLFPFETRRQYFHSTAFGLSRALQRLQQQQSADGTSSANER
ELRVGRLQRQKVRVSRTRILDSAAKVMELYSGHKAVLEVEYFGEVGTGLGPTLEFYTLVS
RELQKNSLDLWRTESRPGSPQQADTEMPDINEDVLDEPSENQASVQPVEQNIDYVTAPHG
LFPRPWHPASTDARYMKTVEHFRLLGRVMAKALQDGRLLDLPFSIPFYKLVLGQELDLYD
VKAIDPELGSTLDELQGLVRRKQYLEGVCHQMSDGLRFRGSRIEDLCLDFTLPGYPEFHL
KEGGNEIMVTLDNLEEYVALVVDATVKMGISAQMEALRSGFSQVFQLSSLQIFTEQELDN
LLCGRRELWTPETLVDHIKFDHGYTSASPPVRHLLEIMGEFTAEEQRDFLRFATGAPRLP
PGGLAALNPKLTIVRKHPTGGNGSSVVLGSTPPGAASAMGTTLADGDLPSVMTCANYLKL
PPYSSREVMRERLMYAISEGQGSFDLS
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgcagccgtaagcgggccgaggccactgggaggcggccaccacctgcgcaa
tcgtcttcgcgagcttccaagcgagtgcgcgtcggcgcctctagttctagttccggcgcg
gcagcagcggcggcggcggcgccaccagcaccagcgccagtagcagcagcggcggcggga
gcttccagcagccgatccaggccatcgactcggaggaacactgcgtctcaagcggggacc
tctgtaagtaacagctccggcgagaaggatgacaaggggaaggagaaagaggcgtgtagg
aacagggatgccagggaccgggccgccggagcttccgtcgaggccgacgacgacgatggt
ggcgatggcgtgagcaccttgcagcagaacttggcgtcggctagcagcgccttgcatggt
ttgctccggaagctgggcgctggattggatgagtttttgccatcgtcgaccccggctcat
cagagcagccggttgaagcggattctttccgggttgaaggccgagggggaggaggggcgg
cagttggaggcgttgtctcagctgtgcgagctgctctccatcggcacggaggagtctttg
agtagcttctcggtggactcgttcgtgccggtgctcgtcagcctcttgaaccacgagtac
aatccggatgtgatgctgctggcagccagggcgcttacacacctctgtgacgtgctcccc
tcgtcctgcgctgccgtggttcactacggggcggttccttgcttttgtgcacggcttctc
tcaattgagtatatcgatcttgcggaacagtctttacaagctttagagaaaatatcccat
gaacacccggcagcgtgcctacgagcgggagctttggttgctgtcctctcgtatttggac
ttcttctccaccggggtccagagggttgctgtttccacggccgctaatatatgcaggcag
cttccatctgatggtgtgaattttgttatggagtccgttcctatactgaccaacttatta
caataccaggatcctaaagtggtggatcatgcttctctgtgtctcacacggattgcagac
tcgtttgcaaattcatcggagaaaatagacgtgctttgctcccatgggctaattccgttg
gctgcacgactcgtctctgttggcaacccaaacggcgccatggttcctcaaacttcgttg
agtgcttcgacatacacgggtttgattcgtctcctttctagctgtgcgagtggatctgct
tcggcgtctgaaagtctgctattactgaatataagctccatacttaaagatattctaact
ggagctggcttaacatcaactacgtccgttgctccttctatcagcaggcttcctgaacag
ctcttcgagattgtgaaccttgtaaacgagcttttaccacctgttcctgatgtcggtgcc
gcgccattgccaaatggagtggacagcacgtcgtcctctaaggtgacccaagcatcgcct
cggatacagctcctgcaagatcgtccggaactgttgctgggatttggagctgatcttttt
ccagtgctggttcaggtttatgggtctagtgtaacttcttcggtgcgacacaagtgttta
gctgccattcataagcttctttatttcagtacaccagaaatgctacattctctctccaaa
gacacaaacatatctagctttctagccggggttctagcttcgaaggatccttccgtatta
ctcactgctcttcacatcaccgagttgctgatgcaaaagctaccaggagtttttgcgaag
accttcgtgaaggagggtgtcgtgcatgctattgataccttgattgcatgcgagcaacaa
ctgggaaagacttcggattctcagaagacccgtcgtgctacgtctggtcgacgtcgctct
gggagcacgagtgacgttcatccagatgatccaggtggttccagcagtgctccagttggc
tcgccaccaaatgccgattctcctctgcatacagcacgtcttggactgctttcaactgcg
gtcgcaaaagccaagtttttgaggggggctcacttttgcaacggaattacagatggcggg
gcaacggaaagtctatgcaggcttaaatctctttgctccaagctgactgcagactgtact
ccggaagtgaaggggaaagggaaagggaaagccaaagcttgtggttcaacgacctcttta
tctgaggaacagttactggctgctatatctggagtgttcggggaactcgaaaacggggaa
ggcgtttctacatttgagtttgtcaacagtggcattgtgagtgcgctgctgaactatctg
tcttgcggttccgtggatggcagatcgaggcagcaggctctgaacaggctaaaaaacttc
cttgctgtggccctttcatccgacattagagaagcgcctttgacggttttggtgcggaaa
ctacaaaacgcgcttggctccttggaaagatttcctgttattttgagccatggtcctcgt
gcaactggaagtactgcaagtattgctgccggcctcagtgcgttaactcaaccgttcaaa
ctgcgactttgcagagcatccggtgagaaggttcttcgtgactactccacgaacgtggtc
cttattgaacctttggctactttggctgccattgaagacttcttatggtctcgagttaaa
agacacgacagttctccctcgtcgacggttgcagcatcttccgactgtgtttcttctcca
cctgcgtcaactactcctacggcctcaacatcgactccatcaaggccttctacaagatca
cgtacagctgccgctggcagtggcgatgcaacgccgtctaaaggcaagggaaaggctaaa
acttttgaagctcgagcaactactgaaagtcggggtcctgaaactcgtaatgcggctgct
agaaggagagctgctgctgcggcagcttcggcagctgttacaaaacaacgggcacccatt
gacagcgaggatgacgatgcagacgcatctcctgttgaagttgaggacgccgtagcaatg
gacgaggatgatgtctctgaggacgaagaggaacttttcggtgaagagccagctgaagtt
tgcgtcggtgatcgtgtgcatgatgtgcaactgggagattctgcggatgcaggggctgtt
gcgactagtgccaccacgagcgagactccatcttctttcggcacaggtgctgcaggttca
agtacgccggtcttaataggaacaggggcaagtggatcaagagcgaccgctgctgttgga
aagggtgctctttcgtttgctgcggctgcaatggctggcgcaaatgcttcaaaaaacagc
aaagatcgcaagtctctcgcagctgtcgcttccgctaacgtgcctccgaagctgtctttc
tatctgggtggtaaactgctcaacaggtccttgactattttccaggcaatccaaagacaa
acagccatggacgaagatgacgacgaacgatatgcagcaccagatcatccgttaggccac
ggccgcaggttgtgggacgaggtttacacgataacttatcagagagctgatccgactgaa
aagacttctccaggaggggctagtagcactaagtctggggtggccggttccagtagtcag
gggttagacgggttgcagcaagcatcacttttggacgctatattgcaaggagaactgcct
tgtgacttagataagtcgagctcgacgtacaacatcctactgctgctccgggtgttggaa
ggtttgaacagactggctcctcgcttacgtgctcaaggggtgatagacgcctttgccgaa
ggcaaagtatcaagtctcagcctcagtgaggcatcaacgggaggagcgtctgttctacag
gaagagttccttagcagcaaactaactcccaagctggcgcgtcagatgcaagacgccctg
gccctctgcagcggcggcttgccggcgtggtgccaccagctgactaaagcgtgtccgttt
ctcttcccgttcgagacgaggaggcagtacttccattcgactgcgtttggcctttctcgt
gctctccagcggttgcagcagcagcagagtgcagacgggacatcttctgcaaacgaacgt
gagcttcgagttggcaggctacaacgtcagaaagttcgcgtttccaggacgcggattctc
gactcggctgcgaaggttatggagctttactccggtcacaaggctgttttggaagtggag
tacttcggggaggttggcacaggtctggggcctacgctggagttttacacgctggttagc
cgtgaacttcagaagaactctttggatctgtggcgtacggaatctcgtccgggctcgcct
cagcaagcagacactgagatgcctgacatcaacgaggatgtgttggacgaaccgtcagag
aatcaggcgagtgttcagccagtggagcagaacatcgattacgtgaccgctccgcatggc
ttgtttccacggccgtggcaccccgcgtcgactgacgccagatacatgaaaacagtggaa
cacttccgattgcttgggagagtcatggccaaagctttacaggatggacgtctgttggat
cttcccttctccatccccttttacaagcttgttcttggacaggaactggacctttacgat
gttaaggccattgacccagaactcgggtcaacattggacgagttgcaaggtctggtccgc
cgtaagcaatatctggagggcgtttgccatcagatgtcggatggactgagattccgtggt
tcgaggattgaagacctttgcctcgacttcacgcttccgggatatccagagttccacctg
aaagaaggtggaaacgagatcatggtgactctggacaacctcgaggaatatgtagcatta
gttgtggatgcaacggtgaagatgggtatttccgcacagatggaagcattacgatcagga
tttagtcaggtgtttcagttaagctcattgcagatcttcactgagcaggaactcgataat
ttactctgtggacggcgagaactgtggacgccggaaactctggtggatcatatcaagttt
gatcacggctatacttcagccagtccacctgttcgtcatctattggagataatgggcgag
ttcactgctgaagagcagcgggacttcttgagatttgccacaggagctccacgtctccca
cccgggggtctagctgccttgaatcccaagcttacgatcgtgcgtaagcatccaacaggt
ggcaatggatcctccgtggtgttgggatcaactccgccaggtgccgcgtctgccatgggg
acaactcttgcggacggggacctcccaagtgtgatgacatgtgccaactatctcaagctg
ccgccttattcctccagggaggtgatgcgagaaaggttgatgtatgccatctccgaagga
caaggatcgtttgatctctcctag
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integrated database retrieval system
