KEGG   Selaginella moellendorffii: SELMODRAFT_146848
Entry
SELMODRAFT_146848 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
smo  Selaginella moellendorffii
Pathway
smo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SELMODRAFT_146848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_146848
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_146848
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     SELMODRAFT_146848
   Coactivators
    SAGA/TFTC/STAGA complex
     SELMODRAFT_146848
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     SELMODRAFT_146848
    STAGA complex
     SELMODRAFT_146848
    TFTC complex
     SELMODRAFT_146848
    SAGA complex
     SELMODRAFT_146848
    SLIK complex
     SELMODRAFT_146848
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Histone CBFD_NFYB_HMF TAF4
Other DBs
NCBI-GeneID: 9646269
NCBI-ProteinID: XP_002969840
JGI: 146848
UniProt: D8RG19
LinkDB
Position
Unknown
AA seq 484 aa
MSIVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDD
VNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAV
MAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPVKHVLSRELQL
YFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGLNDLPLLFSLM
RVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRDFTATLIAFICKRF
GHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLLILPNLEVYINLLL
PEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSRKKPANNKSQSTTRKDVD
GDASMHEEDGADDKDEGVKRRRRALSEAWKEDVEVGDLINSLVDLFGEEMLPFIPMREMS
KCIL
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgagcatcgtccctaaggagacgattcatgtcatcgcgcagagcattggcatcagcaat
ctccacgatgatgtcgccgcggcgcttgcgccggatgtcgagtatcggatgcgcgagatc
atgcaggaggcgatcaagtgcatgcgccactcgaagaggagcgttctcaccaccgacgat
gtcaatacggccttgagcttgagaaatgtagagccactctatggatttgcctctggagat
ccattgcgcttccggagagctgttggtcactctgatctgttcttcatagatgatagggag
ctcgactgtaaagagatcaccgaggctcctttgacgaaagcacctctagacacggccgtc
atggctcactggctagcaatagagggaatacaacccgccattcctgagaacgttcctatt
gatcctctttcagctccgccggaagtgaagaaatccgacattcctggattgaagcctgat
cagatgacagtggacctgaagcttcctgtcaaacatgttctttctagagaacttcagcta
tactttgagaagatcacggagcttattgtcactggcgccgacgatgtgctactaaaagac
gtctttgcaagtttggcgactgattccggtttacaccctttggtaccatacttcacgcaa
tttattgcagacgaggtaacacgggggcttaatgacttgccgctccttttctctctgatg
cgcgttgctcgcagcctgctactgaatccacacatccatatcgagccttatctccatcag
ttgatgccatctgtggtgacgtgcctcgttgcaaagcgcctgggtggtaagaatttcgtc
aaccattgggagctccgggacttcacagccacacttattgccttcatttgcaaacgcttc
ggtcatgcgtattataacttgcaaacgcgcgtgaccaaaactttactccacgccttcttg
gatccgaaacgagcaatgacacaacattatggtgctgtgaaaggaatcgcagctcttggc
tcaaaactggtgcgactattgattcttcccaacctggaagtatacatcaacttgctcttg
ccagaaatgtcttcccaagatcaagcaaacgagctaaagagatacgaagccatcagagtc
tacggagctcttcaggcggcggctggaaactgtatatatgaaatgctccagtccgctcct
ccctcaaggaagaaaccagctaacaacaagtctcaatcaacaacacgcaaagatgtcgac
ggggacgcatcaatgcacgaggaagacggggccgacgacaaggacgaaggcgtgaagagg
cgcaggagagctttgtcggaggcgtggaaggaggatgtggaggtgggcgatctcatcaac
tcactggttgatctgtttggcgaagaaatgctaccgttcataccgatgcgagagatgagc
aaatgcatcttgtaa

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