Selaginella moellendorffii: SELMODRAFT_146848
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Entry
SELMODRAFT_146848 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
smo
Selaginella moellendorffii
Pathway
smo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SELMODRAFT_146848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_146848
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_146848
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SELMODRAFT_146848
Coactivators
SAGA/TFTC/STAGA complex
SELMODRAFT_146848
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
SELMODRAFT_146848
STAGA complex
SELMODRAFT_146848
TFTC complex
SELMODRAFT_146848
SAGA complex
SELMODRAFT_146848
SLIK complex
SELMODRAFT_146848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
9646269
NCBI-ProteinID:
XP_002969840
JGI:
146848
UniProt:
D8RG19
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSIVPKETIHVIAQSIGISNLHDDVAAALAPDVEYRMREIMQEAIKCMRHSKRSVLTTDD
VNTALSLRNVEPLYGFASGDPLRFRRAVGHSDLFFIDDRELDCKEITEAPLTKAPLDTAV
MAHWLAIEGIQPAIPENVPIDPLSAPPEVKKSDIPGLKPDQMTVDLKLPVKHVLSRELQL
YFEKITELIVTGADDVLLKDVFASLATDSGLHPLVPYFTQFIADEVTRGLNDLPLLFSLM
RVARSLLLNPHIHIEPYLHQLMPSVVTCLVAKRLGGKNFVNHWELRDFTATLIAFICKRF
GHAYYNLQTRVTKTLLHAFLDPKRAMTQHYGAVKGIAALGSKLVRLLILPNLEVYINLLL
PEMSSQDQANELKRYEAIRVYGALQAAAGNCIYEMLQSAPPSRKKPANNKSQSTTRKDVD
GDASMHEEDGADDKDEGVKRRRRALSEAWKEDVEVGDLINSLVDLFGEEMLPFIPMREMS
KCIL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtccctaaggagacgattcatgtcatcgcgcagagcattggcatcagcaat
ctccacgatgatgtcgccgcggcgcttgcgccggatgtcgagtatcggatgcgcgagatc
atgcaggaggcgatcaagtgcatgcgccactcgaagaggagcgttctcaccaccgacgat
gtcaatacggccttgagcttgagaaatgtagagccactctatggatttgcctctggagat
ccattgcgcttccggagagctgttggtcactctgatctgttcttcatagatgatagggag
ctcgactgtaaagagatcaccgaggctcctttgacgaaagcacctctagacacggccgtc
atggctcactggctagcaatagagggaatacaacccgccattcctgagaacgttcctatt
gatcctctttcagctccgccggaagtgaagaaatccgacattcctggattgaagcctgat
cagatgacagtggacctgaagcttcctgtcaaacatgttctttctagagaacttcagcta
tactttgagaagatcacggagcttattgtcactggcgccgacgatgtgctactaaaagac
gtctttgcaagtttggcgactgattccggtttacaccctttggtaccatacttcacgcaa
tttattgcagacgaggtaacacgggggcttaatgacttgccgctccttttctctctgatg
cgcgttgctcgcagcctgctactgaatccacacatccatatcgagccttatctccatcag
ttgatgccatctgtggtgacgtgcctcgttgcaaagcgcctgggtggtaagaatttcgtc
aaccattgggagctccgggacttcacagccacacttattgccttcatttgcaaacgcttc
ggtcatgcgtattataacttgcaaacgcgcgtgaccaaaactttactccacgccttcttg
gatccgaaacgagcaatgacacaacattatggtgctgtgaaaggaatcgcagctcttggc
tcaaaactggtgcgactattgattcttcccaacctggaagtatacatcaacttgctcttg
ccagaaatgtcttcccaagatcaagcaaacgagctaaagagatacgaagccatcagagtc
tacggagctcttcaggcggcggctggaaactgtatatatgaaatgctccagtccgctcct
ccctcaaggaagaaaccagctaacaacaagtctcaatcaacaacacgcaaagatgtcgac
ggggacgcatcaatgcacgaggaagacggggccgacgacaaggacgaaggcgtgaagagg
cgcaggagagctttgtcggaggcgtggaaggaggatgtggaggtgggcgatctcatcaac
tcactggttgatctgtttggcgaagaaatgctaccgttcataccgatgcgagagatgagc
aaatgcatcttgtaa
DBGET
integrated database retrieval system