Selaginella moellendorffii: SELMODRAFT_147137
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Entry
SELMODRAFT_147137 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_147137
Enzymes [BR:
smo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SELMODRAFT_147137
Transfer RNA biogenesis [BR:
smo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SELMODRAFT_147137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
TPR_26
Motif
Other DBs
NCBI-GeneID:
9631768
NCBI-ProteinID:
XP_002970555
JGI:
147137
UniProt:
D8RH12
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MLVELVKDGKLVCAVVDRPEGKKNWIAIDQYGNSHSVKPGKVRYVVPDVETFKPEDIVEF
LKQTEAIQDLSLIEIAWHELVESEEKSISSKKLAKVLFGDVSHVEYYATHCMLSSKQVFF
RRKQKGPVVFYEPRSSAEVQELQHQYNVEETARMELVNFINMVKSALAQSHDSKPSPTSW
SSEKFALARVEALQEFALDAFADETQKNLAKEVLEALGQQKSPESALDVLIGIGILPFHV
NVELLKSKIPTAFSDEHIAAAKLLEEEPCLDQNKDSRVDLTAMKVYTIDSDSTEEIDDGL
SATELPDGRVKIWIHIADPTRWVEPEHIIEREAKHRGTTVYLPEKTIPMFPMNLATGPMS
LRQNTECCAVSVSVILDKDGSIAESSVCSSVIKPSMRLSYDSATELIMYQLDEERELNLL
AKAARLRYEWRLSQQGAVDLSTRQIEVKVTNPDSFEPEIKLQVIDMTSPSGQLVSEMMIL
CGEAIAAYGNEKILALPYRGQSDMAVEMNCTKPLQHSSLGLPGYVQFTSPIRRYSDLLAH
YQVKAALRKKSPPLSSSQLEAAIMLANLKTKEARKLGNASSRYWLIEYLRRRPRDELYEA
SVVRVKDGQVVVSIKEVGLHTSVSTNVKLEAGDAVRVIVAAANPRKDILDVELVEVLNTE
DALDNVVAA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtagagcttgtaaaagatggcaagcttgtttgtgcggttgtggataggccggaa
gggaagaagaactggattgccatagaccagtatggaaattcccactcggtgaagcctggg
aaagtaagatacgttgttccagatgtagaaacgtttaaaccagaagacatcgttgagttc
ctgaagcaaacggaagccatacaggacttgtctcttatagaaattgcatggcacgagctg
gttgagtcagaggagaaatccataagttcaaagaagctagccaaagtgctttttggggat
gtttcccacgttgagtactatgcaacgcattgtatgctatcttcaaagcaagtgttcttt
aggcgcaagcaaaaagggcctgttgtcttttacgaaccgcggtctagtgcagaggtgcag
gagttacaacaccagtataatgtcgaggaaaccgctcgaatggagctggtgaattttatc
aacatggtcaagtccgccttagcacagtctcatgattcaaagccatctcccaccagttgg
tcctcggaaaagttcgcgctcgcccgcgtagaagctctgcaggaatttgcgttagatgcg
tttgccgatgaaactcagaagaacttggcaaaagaggttttggaggccttgggacagcag
aagtctcctgaatctgctctagatgttttgatcggcataggtattcttccgtttcacgta
aatgtggaactgctaaagtccaaaattccgactgctttttctgacgagcatattgcggct
gcaaagcttcttgaagaggagccatgtcttgatcaaaataaggattctagagtcgattta
acagccatgaaggtttacaccattgattcagattctactgaagagatcgatgatggattg
agcgcgactgagctccccgacggtcgtgtgaaaatttggattcacattgcggatccgaca
agatgggtagagccggaacatataattgaaagagaagcaaaacaccgaggaacgaccgtt
tacctgccagagaaaacgattcccatgtttcccatgaacttagctactggaccgatgagc
cttaggcagaacacggaatgctgcgctgtgagtgtgtccgtcatcctcgacaaagatggc
agcattgcagagtcttcggtatgcagctcagtgataaaaccgtcgatgcgactctcatat
gactctgcaacggagcttataatgtatcaactagacgaagagcgtgagctaaatttgctg
gcgaaggctgccagactccgttatgaatggcgactttctcagcagggtgcagttgattta
tccactcggcagatagaagtcaaagtaaccaatccagattcgtttgagcccgaaatcaag
cttcaggtgatcgacatgaccagtccctctggacaacttgtttcagagatgatgattctg
tgtggcgaggccatagctgcttacggcaacgagaagattctggccttgccatacagagga
cagtcagacatggctgtcgagatgaactgcaccaaaccgctacagcactctagtttgggc
ctacctggatacgttcagtttacttctccaatcagacgatatagtgacttgttggcacac
taccaggtcaaagcagcccttcgcaaaaagtctccaccgcttagcagtagccagctcgag
gcagcaattatgctagccaacttgaaaacgaaggaggcgagaaaattgggaaacgcgtcc
tctaggtactggcttattgagtatctgcggaggcggcccagggacgagctgtatgaagcg
tcggtagtcagggtcaaagacggacaagttgtcgtctccatcaaggaggtgggattgcat
acatcggtgagtaccaacgtgaagctagaagctggtgatgccgttcgagttatagttgcc
gctgctaatcctcggaaagatattttggatgtcgaactggtagaagtgttgaacaccgag
gacgcattagacaacgttgtagcagcttaa
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