KEGG   Selaginella moellendorffii: SELMODRAFT_147206
Entry
SELMODRAFT_147206 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
smo  Selaginella moellendorffii
Pathway
smo04120  Ubiquitin mediated proteolysis
smo04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SELMODRAFT_147206
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    SELMODRAFT_147206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_147206
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SELMODRAFT_147206
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_147206
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SELMODRAFT_147206
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 EIF3I Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR75_1st WD40_RFWD3 WD40_like Beta-prop_SCAP
Other DBs
NCBI-GeneID: 9631797
NCBI-ProteinID: XP_002970357
JGI: 147206
UniProt: D8RH86
LinkDB
Position
Unknown
AA seq 467 aa
MEVSNGAIGQRGGGGGTLLCIPSDTLADDKRLKKRSRRLLVSDSTGESHNNAKRSAAMYS
TAFNFKLPGTTKTYPGTSTTNSSLDPPVDSSRMPEPESCDQSRHETWEFETLVPFSCETP
SLLSSDVISTIDYDETGQLIATGGLARKIRICSYQELVNGMGRECFQGRNVKNLFTTICM
PAKLSSLKWRPGGSEVIACGDYDGSVTEWDVEHGVTVSERYEHTGRTVWSIDYSRDFRGL
LASASSDSTVRFWSRNVERSVGIIKSLKRNSMCCVEFGRSSGPCCYVAVACADASVYLYD
MRSLGSPVATLRGHERSVSYVRWLGENSLVSSSPDGTIRLWDIASTVTGTGESWHARNDE
LPIARTFGCHSNTRNFVGLSVASSGGGSGGLIASGSENNEVFVYSSSVSERPVFRHKFND
AVVLDDKAFVGSVCWTKQQDHLSLISANSEGIVQVIRATTTATARHT
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggaggtgtccaatggagcaatcgggcagagaggaggcggtggaggaacgctgctttgc
attcccagcgacacgctcgcagatgataaacggctgaagaaacgttcgcgcaggctgctc
gtctcggatagcactggtgagtcccacaacaatgcgaagcgatcggcagcaatgtactcc
acagctttcaacttcaagctcccggggaccacgaaaacttatcctgggaccagcactacc
aacagctctttggacccgccagtggattcatcgcgaatgccggagccggagtcgtgtgat
cagtccaggcacgaaacatgggagtttgagacgctggtcccgtttagctgcgaaacgcca
tcgctgctgtcgtcggacgtgatctccacgatcgactacgatgaaaccggacagctgata
gctactggtgggctggcgaggaagatcaggatttgctcgtaccaggagctagtgaacggg
atgggaagggagtgtttccaggggcgcaacgtgaaaaacctcttcaccaccatttgcatg
ccggcaaagctcagcagcctcaagtggaggccggggggctccgaggtgatcgcttgcggt
gactacgatggctcggtcacggagtgggacgtagagcacggggtcactgtgagtgaaaga
tacgagcacacgggacgaacagtgtggagcatcgactacagcagggacttccggggcctg
ctagcgtcggcgtcgagcgacagcaccgtgaggttttggagcaggaatgtggagcggagc
gttgggatcatcaagtcccttaagcggaactcgatgtgctgcgtggagttcggccgctcc
tccggtccctgctgctacgttgccgtggcctgcgccgacgcgagtgtgtatctgtatgat
atgcggagcctggggagcccagtcgcgaccctgcgaggccacgagaggtccgtgagctac
gtgagatggctgggcgagaacagcttggtgtcctcgtctccagacggcacgattcgactg
tgggatatcgcctcgacagtaactggtaccggcgagagttggcacgctcggaacgacgag
ctgccgatcgcgagaacttttggctgtcactccaacaccaggaactttgttggactgtcc
gttgcgagctccggcggcggctccggcgggctcatcgcgtccgggtccgagaacaacgaa
gtttttgtgtacagctcttccgtctcggagagacccgtcttccggcacaagttcaacgat
gcggtcgtgctggatgataaggccttcgtggggtcggtttgctggaccaagcaacaagat
cacttgtccttgatctcggcaaactccgaaggcattgtgcaggttatacgggccacaaca
acagcaacagcgcgacatacatga

DBGET integrated database retrieval system