Selaginella moellendorffii: SELMODRAFT_148837
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Entry
SELMODRAFT_148837 CDS
T01496
Symbol
SmABCB3
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_148837 (SmABCB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_148837 (SmABCB3)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_148837 (SmABCB3)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_148837 (SmABCB3)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_148837 (SmABCB3)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_148837 (SmABCB3)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_148837 (SmABCB3)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_148837 (SmABCB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
AAA_21
RsgA_GTPase
nSTAND1
AAA
Zeta_toxin
AAA_15
AAA_5
DUF87
DUF2585
DLIC
Motif
Other DBs
NCBI-GeneID:
9637777
NCBI-ProteinID:
XP_002973102
JGI:
148837
UniProt:
D8RQL9
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MDWGLIFVGAIGACAHGAAIPVFFIFFGKLIDEFGANYDNPTKLGHGVSKYALYFVYLGL
AILVAAWLEVACWTYTGERQSARMRVAYLKAMLSQDVGFFDTDTTTGEIVNGISSDTALV
QEAIGAKAGNYLHYMARFVAGFAVGFSSVWQLTLVTLAVVPGIALAGGLYAHTMIGLTTK
NQKAYAKAGNVAEQSISQVRTVYSFVQEEQAVDSYARALETTLEIGKKSGLAKGMGIGAT
YGLTIGAWSLLLWYAGVLVRNGTTNGGEAFTTILNVVIAGLSLGNAAPNLAAFGKGRAAG
YTILEMINRKPSINLQALEGKKLDNVHGNIEFDKVCFSYPSRPDVVIFQDLSLSIPAGKT
VAVVGSSGSGKSTIISLIERFYDPQSGRVLLDGIPIQELQLKWLRGRIGLVSQEPALFAT
SIRENILFGKEDASDGEIEAAARTSDAHTFVKQLPSGYDTQVGEKGIQLSGGQKQRIAIA
RAMVKDPAILLLDEATSALDASSESAVQEALERLMVGRTTVVVAHRLSTIRNADTIAVVH
QGKVVESGTHDELLAKAEFYAALVKLQAAAAAVAKESDTASKHSASSLSLSQRTFSFRVS
VRSEADAHSNAELEEYHQQHQFPKASYFRLLKLNAPEWPFALAGALGAILAGAETPFFAY
GITQALVTFYSPDQSHQKREVEKISTIFAIATVVTVGIYVLEHYFFGVMGERLTMRVRKM
MFSNILRNEIGWFDREENNSSLLASRLSSDATMLRAAVGDRLCTLTQNLALIVTGFVMAF
VLQWKLTLVIIALFPLMIGAHITEHLFLKGFGVNLSKAYHRATMVAGEAVGNIRTVAAFC
AEKRVMDLFNRELQGPKSNAFTRGQITGIGYGVSQCCLFSSYGLALWYASNLIKQGDTTF
GPVLKSFVLLIFTAFGVAETLSLAPDILRGSQAVGSVMELIDYQTEIDPDDGEAKEISHV
RGDVELRRVCFSYPTRPDVTIFRDLSLRVRAGKSLALVGPSGSGKSSVIGLISRFYDPSS
GAVLVDGKDVSKLKLRSLRQHIGLVQQEPALFDTTIFENIRYGKPEATESEVVEAAKAAN
AHSFISSLPNGYQTVAGERGVQLSGGQKQRIAIARAVIKNPAILLLDEATSALDAQSEKV
VQQALDRVMKGRSCLVVAHRLSTIQNANVIALLQDGQIIEQGSHSELVRKIGGAYAKLVS
LQQQQQHHEEHRLD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggattgggggctgatcttcgtgggcgcaatcggggcgtgcgcccatggagcggcgatt
ccagtgttcttcatcttctttgggaagctcatcgatgagtttggcgcaaactatgataac
ccgaccaagctcggccatggcgtctccaagtatgctttatattttgtctaccttggactc
gcgatcttggtcgcagcgtggcttgaggtggcgtgctggacttacacgggcgagagacaa
tcggcacgaatgagagtggcttatctcaaagcgatgctcagccaggacgtgggattcttc
gacacggacacgaccaccggcgagatcgtcaatgggatctccagcgacaccgcccttgtc
caagaagcaatcggtgcaaaggctggaaactatctccactacatggccagatttgtggct
ggcttcgcggtcggcttctcgtccgtgtggcaacttacgctcgtcaccctcgctgttgtt
cccgggattgctctcgccggtggattgtacgctcacaccatgatcgggctcaccacaaag
aaccaaaaggcctacgcgaaagctggaaacgttgctgaacagagcatttcccaagtaaga
acggtctactcgttcgtccaggaggagcaagccgtggattcttacgctcgagcgctggaa
acgacgctggagattggaaagaagagtggcctcgccaaaggaatgggaatcggagcaacg
tatggcttgacaatcggtgcgtggtcgctgctcctatggtacgccggcgttttagttcgc
aatggaaccaccaatggtggcgaagctttcaccaccattctcaacgtcgtcatcgccgga
ctatctcttggaaacgctgctccaaatctcgcagccttcggcaaaggccgagccgcggga
tacaccatactggagatgatcaaccgaaaaccatccataaatctccaggctctcgaaggg
aagaagctcgacaacgtccatggaaacatagagtttgacaaagtatgctttagctatcca
tcccggccggacgtcgtcatcttccaggatctcagcctctccatccccgcgggaaagact
gtggctgtcgttggaagcagtggatccggcaagagcaccatcatctccctcatcgagcgt
ttctatgatccccagtcaggaagagtgctcctggatggaattccaatccaagaactccag
ctcaagtggctgaggggccggatcgggctggtgagccaagaaccggcgctcttcgcgacg
agcatccgagagaacatcctgtttggaaaggaggacgcaagcgatggcgagatcgaggcg
gctgccagaacctcggacgctcacaccttcgtcaagcagctccccagcggctacgacacc
caagttggcgagaaaggcatccagctctcgggcggacagaagcaacgcatcgccatcgct
cgagctatggtgaaagatccggccattctcctgctggacgaggccaccagcgccttggac
gcgagctccgagagtgccgtccaggaggctctcgagcggctcatggtggggaggacgacg
gtggtggtggcgcacaggctctccaccatccggaacgccgataccatcgcggttgtccat
caagggaaggtggtggagtctggaacgcacgacgagctcctcgccaaggccgagttctac
gctgctctcgtcaagctccaggcggcggcggcggcggtggccaaggagagtgacactgct
tccaagcactccgccagttctttgtcactgtcgcagcgaactttcagcttccgggtgagc
gtacgctccgaggccgacgctcacagcaacgccgagctcgaggagtaccaccagcagcac
cagtttccaaaggcctcgtactttcgactgctcaagctcaatgccccggagtggcctttc
gcgctggctggagcactgggagctattcttgccggagccgagacccccttcttcgcctac
gggatcacgcaggccttggtcaccttctacagccccgaccaaagccaccagaagcgagaa
gtcgagaagatctccaccatctttgccatcgccactgtcgtcactgttggaatctacgtc
ctggagcactacttcttcggcgtcatgggcgagaggctgacgatgcgagtccggaagatg
atgttctcgaatatcttgcggaacgagatcggctggttcgatcgagaagagaacaacagc
agcttgctggcctctcgtctctcgtcggacgccaccatgcttcgtgccgccgttggggat
cgcctgtgcactctcacgcaaaatctcgccttgatagtcaccggcttcgtcatggcgttc
gtgctgcagtggaagctgacgctggttatcatcgccctcttccctctcatgatcggagct
cacatcaccgagcacctcttcctgaaaggcttcggagttaatctcagcaaagcttaccac
cgagcaacaatggtggcgggagaagccgtcgggaacatccggacagtcgcagcgttttgc
gccgagaaacgagtgatggatctcttcaaccgcgagctccaaggccccaagagcaacgct
ttcacccgtggacagatcaccggcatcggctacggcgtctcccagtgctgcctcttcagc
tcctacggcttggccctctggtacgcctccaatctcatcaagcagggtgacaccaccttt
ggacccgtgctcaagagcttcgttctcctcatcttcaccgcctttggagtcgcggagacg
ctatctctagcacccgatatcctccgaggctcgcaagcggtcggctcggtcatggagctc
atcgactaccagaccgagatagatcccgatgatggcgaggccaaggagatcagccacgtc
cggggcgacgtcgagctccggagagtctgcttcagctatccaaccaggccggacgtgacc
atcttccgggacctgagcctgagagtccgagccggcaagagcctggctctagtcggtccc
agcggctcggggaagagctcggtcatcggcctcatcagccggttctacgatccatcctcc
ggggcggtgctcgtcgatggaaaggacgtcagcaagctcaagctccgatcgctgaggcag
cacatcgggctcgtccagcaggagcccgcgctcttcgacaccaccatcttcgaaaacatc
cggtatggcaagcctgaggcgacggagtcggaggtggtggaggcggccaaggcagccaat
gctcacagctttatcagctctcttccgaatggctaccagactgtggccggggagagaggc
gtccagctctcgggtggccagaagcaaaggatcgccatcgccagagctgtgataaagaac
ccggccatcttgctgctcgacgaagctaccagtgcgctggatgcgcagtccgagaaggtg
gtccagcaggccttggacagggtgatgaaaggtcggagctgcctagtcgtcgctcacaga
ttgtccaccatccagaacgcaaacgtgatcgcgctcctccaggacgggcagatcatcgag
caaggcagccacagtgaattggtccggaagatcggaggcgcctatgcaaagcttgtcagc
ttgcagcagcagcaacagcaccacgaagaacaccgcctggattga
DBGET
integrated database retrieval system
