Selaginella moellendorffii: SELMODRAFT_150734
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Entry
SELMODRAFT_150734 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
smo
Selaginella moellendorffii
Pathway
smo03020
RNA polymerase
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SELMODRAFT_150734
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_150734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_150734
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_150734
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SELMODRAFT_150734
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SELMODRAFT_150734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
9630425
NCBI-ProteinID:
XP_002975776
JGI:
150734
UniProt:
D8RRF0
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVAYERDMKVMNAGAFTIQREDHTVGNVVRMQLHRDPNVLFAG
YKLPHPLQYKIIVKVQTTSQSSPIQAYNLALSDLDKELEHLKRAFESEVAQRQTDYY
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccggatcgctatgagcgcttcgtcgttcccgagggcaccaagaaggttgcg
tatgagagggatatgaaggtaatgaatgccggcgctttcaccattcagcgagaagatcac
actgttggaaacgttgtccgcatgcagctacaccgcgatcccaatgtattgtttgctgga
tacaagctaccacatccattgcaatacaagatcattgtcaaggtgcaaaccaccagccag
tcgtcaccgattcaagcgtacaacctggccctcagcgatctggacaaggagctggagcat
ctcaagagagcattcgagagcgaagtagcacaaaggcagacggactactactga
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integrated database retrieval system