Selaginella moellendorffii: SELMODRAFT_151274
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Entry
SELMODRAFT_151274 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_151274
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_151274
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_151274
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_151274
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_151274
mRNA cycle factors
Common to processing body (P body) and stress granule
SELMODRAFT_151274
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SELMODRAFT_151274
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SELMODRAFT_151274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9649360
NCBI-ProteinID:
XP_002976623
JGI:
151274
UniProt:
D8RZF7
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MTTAWADSVEAERVADSQPPPPARSTYVPPHLRNRPANAPAPSPAPVPQASQQQRPGAGA
WSKPLASSNPPPRFGSASSGNGWSSSNGRSSQPWSDGRRDSREADPFASSEENSSEALFE
QESTAINFDAYEDIPVEASGSDIPAPVGTFAEIDFGTALDENIKRCKFVKPTPVQRHAIP
IALAGRDLMACAQTGSGKTLAFCFPIIAGILRDPPRQRPRGRWACPLALILSPTRELSAQ
IHDEAKKFAYRTGLKVVVAYGGAQISLQMRELERGVDILVATPGRLHDLMERGRVALSMI
KYLALDEADRMLDMGFEPQIRKIVETSDMPPPGQRQTMLFSATFPRTIQSLAADFLHNYI
FLAVGRVGSSTDLIVQRVERVQEAEKRSLLMDIIHGQKAIGANGQPPLMLVFVETKRGAD
ALEDWLIRSGFPATTIHGDRTQPEREQALRCFRTGMTPILVATDVAARGLDIPHVAHVIN
YDLPSDIDDYVHRIGRTGRAGNSGLATAFFTDKDSGLAKPLAELMQESSQEVPSWLEGIA
RSGFGSRGGSRSGSRFGGRDYRKRGPRGGGDGFGGSGYGGGYGGGGYGGGSSAWD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggcatgggcggattccgtggaggcggagcgagtggcggattcacagccgcct
ccaccggcgagaagtacgtacgttccaccgcatttgaggaacaggccggcgaatgcgcca
gcgccatcgccagcgccagtgccgcaagcgtcacagcagcagcgcccaggcgccggcgct
tggtccaagcctctcgcctcctccaatcctcctccaagatttggaagcgcgagctcgggg
aatggatggagcagtagcaacgggaggagctcccagccgtggagcgatgggcggagggac
agcagggaggccgacccttttgcgagcagcgaggagaattcgtccgaggcactcttcgag
caagagagcactgctatcaacttcgatgcgtacgaggacataccagtggaggcgagcggc
agtgacatcccagctcctgtcggcactttcgcagagatcgactttggaactgcgctggac
gagaacatcaagcggtgtaagttcgtcaagcccactccggtccagagacacgccatcccc
atcgctcttgccgggagggacttgatggcttgtgctcagactggctctgggaagacgctg
gcgttctgcttcccgatcatcgccgggattctcagggatccgccaagacaacgtcccagg
ggacgctgggcttgtccgctggcgctcatcttgtcgcccactcgcgagctctcagctcag
attcacgacgaagcgaagaagtttgcctataggactggtcttaaagttgtggtcgcgtat
ggtggcgcacagatttctctacagatgcgtgagttggaacgaggcgtggatattttggtg
gccacgcctggtcgcttgcatgatctcatggaaaggggaagggtggcgttgtcaatgatc
aagtatctggcactggacgaagcggaccgcatgctggacatgggtttcgagcctcaaatt
cgcaagattgtggagacctcagacatgcctccgccaggacaaaggcagacgatgctcttt
agtgcgacatttcctcgcacgattcagagccttgcagcggactttctacacaattatatc
ttcctagcagtcggcagagtaggctcgagcacggatcttatagtacaacgcgtggagcgc
gttcaagaggcagagaagcgtagcttgctcatggacattatccatggtcaaaaggcgatt
ggagcgaacggacagccaccactgatgctagttttcgtggagacgaaacgaggagcggat
gcactggaggactggctgattagatccgggttccctgcgacaaccattcacggggatcgg
acacaaccggagagggagcaagctctcagatgctttagaaccggtatgacgccgatcctc
gtcgccaccgacgttgccgctcgcggcctcgacatcccccacgtcgctcacgttatcaac
tacgatctcccgagcgatatcgacgactacgtccacaggattggccgcacggggcgagca
ggaaactccggcctcgccaccgccttcttcacggacaaggattcgggcctcgcaaagcca
ctggcggagctgatgcaagaatcgagccaggaagtcccgagctggctggaaggcattgcg
aggtcgggatttggaagtagaggaggcagccgatcggggtcgaggtttggaggaagagac
tacaggaaaagggggccgagaggtggtggtgatggctttggtggcagcggctatggtggt
ggctacggtggcggtggctatggtggtggttcgagcgcctgggattga
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integrated database retrieval system
