KEGG   Selaginella moellendorffii: SELMODRAFT_155177
Entry
SELMODRAFT_155177 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
smo  Selaginella moellendorffii
Pathway
smo03082  ATP-dependent chromatin remodeling
smo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SELMODRAFT_155177
   03083 Polycomb repressive complex
    SELMODRAFT_155177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_155177
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SELMODRAFT_155177
  Histone modification proteins
   HAT complexes
    HATB complex
     SELMODRAFT_155177
   HDAC complexes
    Sin3A-HDAC complex
     SELMODRAFT_155177
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SELMODRAFT_155177
    PRC2.2
     SELMODRAFT_155177
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SELMODRAFT_155177
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SELMODRAFT_155177
  Chromatin remodeling factors
   NuRD complex
    SELMODRAFT_155177
   NuRF complex
    SELMODRAFT_155177
   NuRF complex (fruit fly)
    SELMODRAFT_155177
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 EIF3I WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_IFT122_1st NBCH_WD40 MIOS_WD40 Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 9661053
NCBI-ProteinID: XP_002982634
JGI: 155177
UniProt: D8SGP4
LinkDB
Position
Unknown
AA seq 434 aa
MSKEDEEFRDESEERLVNEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRVEPPGKD
YSVQKLILGTHTSDNEPNFLMIAEVQLPLEDTESDARVYDDERGEMGGFGSATGKVQVIQ
QINHDGEVNRARYMPQNPFVIATKTVSAEVFVFDYSKHPSKPPQEGVCNPDIRLRGHKTE
GYGLSWSPFKEGHLLSGSDDSQICLWDVTKAQRVLEAKQIFQAGFFHSFIFIPFAHNNVV
EDVAWHCMHEYLFGSVGDDRHLFIWDIRVQTVDKPLHAIEAHKNEVNCLAFNPLNEWVLA
TGSADKTVALFDMRKLTSPLHTFVNHREEVFQIGWNPKNETILASCGADRRLMVWDLSRI
GEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNNKDDWVVASVAEDNILQIWQMAENIYH
DEDDVAEDMAIATN
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtcgaaggaggacgaggagttccgcgacgagtcggaggagcgcctggtaaacgaggag
tacaagatttggaagaagaacacgccctttctctatgatctggtgatcacgcacgcgctc
gagtggccgtcgctcacggtgcagtggctgccagatcgggtggagccgccagggaaggat
tactcggtccagaagctaatcttgggcactcacacctccgacaatgagcccaatttcttg
atgatcgccgaggtccagctccctctggaggacaccgagagcgatgctcgggtgtatgac
gacgagcgtggtgagatgggcggcttcgggtctgccactggaaaggtccaggtgattcaa
cagatcaaccacgatggcgaggtgaatagagctcgttacatgccacaaaatccttttgtg
atcgccaccaagaccgtgagtgccgaggtttttgttttcgactacagcaagcacccttcc
aagccgcctcaagaaggcgtttgcaacccggatataaggctccggggacacaagaccgaa
ggctatggactttcgtggagtccattcaaagaaggtcatttgctaagcggctcggatgac
tcccagatatgtctctgggatgtgaccaaggcgcagcgagtgctcgaagccaagcaaatc
tttcaggcaggtttttttcattctttcattttcatcccgtttgcacacaacaatgttgtg
gaagacgtcgcgtggcattgcatgcacgagtatctcttcggctctgtaggcgatgatcgt
cacttatttatttgggacatcagagtccagaccgtggacaagcctttgcacgcgattgaa
gctcataagaacgaggtgaactgtttagcgtttaatcccttaaacgagtgggtgctagca
actggatcagcggataaaactgtcgcgctgttcgacatgagaaaactcacgagtccgttg
catacatttgtgaatcacagggaggaggtctttcaaatcggctggaatccaaagaacgaa
accattctagcctcgtgtggagctgatcgcaggctcatggtctgggatctcagcaggatt
ggtgaagaacaaacaccagaggacgccgaggatggccctccggagcttttatttattcac
ggcggccacacgagcaagatctcggatttctcgtggaacaacaaggacgactgggttgtg
gcgagcgtggccgaggacaacattctccagatatggcagatggcggagaacatctaccac
gacgaggacgacgtcgcggaagacatggcgattgcaacaaattga

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