Selaginella moellendorffii: SELMODRAFT_155177
Help
Entry
SELMODRAFT_155177 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
smo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_155177
03083 Polycomb repressive complex
SELMODRAFT_155177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_155177
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SELMODRAFT_155177
Histone modification proteins
HAT complexes
HATB complex
SELMODRAFT_155177
HDAC complexes
Sin3A-HDAC complex
SELMODRAFT_155177
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SELMODRAFT_155177
PRC2.2
SELMODRAFT_155177
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SELMODRAFT_155177
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_155177
Chromatin remodeling factors
NuRD complex
SELMODRAFT_155177
NuRF complex
SELMODRAFT_155177
NuRF complex (fruit fly)
SELMODRAFT_155177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
EIF3I
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
NBCH_WD40
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
9661053
NCBI-ProteinID:
XP_002982634
JGI:
155177
UniProt:
D8SGP4
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSKEDEEFRDESEERLVNEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPDRVEPPGKD
YSVQKLILGTHTSDNEPNFLMIAEVQLPLEDTESDARVYDDERGEMGGFGSATGKVQVIQ
QINHDGEVNRARYMPQNPFVIATKTVSAEVFVFDYSKHPSKPPQEGVCNPDIRLRGHKTE
GYGLSWSPFKEGHLLSGSDDSQICLWDVTKAQRVLEAKQIFQAGFFHSFIFIPFAHNNVV
EDVAWHCMHEYLFGSVGDDRHLFIWDIRVQTVDKPLHAIEAHKNEVNCLAFNPLNEWVLA
TGSADKTVALFDMRKLTSPLHTFVNHREEVFQIGWNPKNETILASCGADRRLMVWDLSRI
GEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNNKDDWVVASVAEDNILQIWQMAENIYH
DEDDVAEDMAIATN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggaggacgaggagttccgcgacgagtcggaggagcgcctggtaaacgaggag
tacaagatttggaagaagaacacgccctttctctatgatctggtgatcacgcacgcgctc
gagtggccgtcgctcacggtgcagtggctgccagatcgggtggagccgccagggaaggat
tactcggtccagaagctaatcttgggcactcacacctccgacaatgagcccaatttcttg
atgatcgccgaggtccagctccctctggaggacaccgagagcgatgctcgggtgtatgac
gacgagcgtggtgagatgggcggcttcgggtctgccactggaaaggtccaggtgattcaa
cagatcaaccacgatggcgaggtgaatagagctcgttacatgccacaaaatccttttgtg
atcgccaccaagaccgtgagtgccgaggtttttgttttcgactacagcaagcacccttcc
aagccgcctcaagaaggcgtttgcaacccggatataaggctccggggacacaagaccgaa
ggctatggactttcgtggagtccattcaaagaaggtcatttgctaagcggctcggatgac
tcccagatatgtctctgggatgtgaccaaggcgcagcgagtgctcgaagccaagcaaatc
tttcaggcaggtttttttcattctttcattttcatcccgtttgcacacaacaatgttgtg
gaagacgtcgcgtggcattgcatgcacgagtatctcttcggctctgtaggcgatgatcgt
cacttatttatttgggacatcagagtccagaccgtggacaagcctttgcacgcgattgaa
gctcataagaacgaggtgaactgtttagcgtttaatcccttaaacgagtgggtgctagca
actggatcagcggataaaactgtcgcgctgttcgacatgagaaaactcacgagtccgttg
catacatttgtgaatcacagggaggaggtctttcaaatcggctggaatccaaagaacgaa
accattctagcctcgtgtggagctgatcgcaggctcatggtctgggatctcagcaggatt
ggtgaagaacaaacaccagaggacgccgaggatggccctccggagcttttatttattcac
ggcggccacacgagcaagatctcggatttctcgtggaacaacaaggacgactgggttgtg
gcgagcgtggccgaggacaacattctccagatatggcagatggcggagaacatctaccac
gacgaggacgacgtcgcggaagacatggcgattgcaacaaattga
DBGET
integrated database retrieval system