Selaginella moellendorffii: SELMODRAFT_157554
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Entry
SELMODRAFT_157554 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K04646
clathrin heavy chain
Organism
smo
Selaginella moellendorffii
Pathway
smo04142
Lysosome
smo04144
Endocytosis
smo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_157554
04142 Lysosome
SELMODRAFT_157554
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
SELMODRAFT_157554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_157554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_157554
Membrane trafficking [BR:
smo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
SELMODRAFT_157554
Exosome [BR:
smo04147
]
Exosomal proteins
Proteins found in most exosomes
SELMODRAFT_157554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
9653604
NCBI-ProteinID:
XP_002985659
JGI:
157554
UniProt:
D8SQW2
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MAAASAPITMKEALVLTSLGINPQCITFNHVTMESEKYICVRETTPQNSVVIIDMNLPLQ
PLRRPITADSSLMNPITKILALKAQIPGTSQDHLQIFNIEMKAKMKSHQMSEQVVFWKWI
TSKMLGLVTQQAVYHWSIEGDSEPVKVFDRTANLSGNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVSGNEAPSTLISFATKSVTSGTLVS
KLHVIELGAQPGKAAFTKKQADLFFPPDFADDFPVSMQISQKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSDSPSTGGFYAVNRRGQVLLATVNEATVVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFQQMKYKEAAELAAESPQGILRTHDTITKFQSVPVQ
PGQTSPLLQYFGTLLTKGKLNAFESLELSRLVVTQNKKNLLENWLADDKLECSEELGDLV
KSVDNDMALKIFIKARVTPKVVAAFAERGEFDKILIYSKQVGYTPDYPFLLQSILRTDPQ
AAVNFALMMAQMEGGCPMDYNVITDLFLQRNLIREATSFLLDVLKPNLPEHAMLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLYTRALQHYTDLNDIKRVIINTHAI
EPQALVEFFGTLSRDWAMDCMKELLLVNMRGNLQIVVQVAKEYSEQLGIGACVKLFEQFK
SYEGLYFFLGSFLSSSEDPDIHFKYIEAAAKTGQLKEVERVTRESNFYDAEKTKNFLMEA
RLPDARPLINVCDRFGYVPDLTHYLYSNNMLRYIEGYVQKVNPANAHLVVGQLLDDECPE
DFIKNLILSVRSLLPVEPLVEQCEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDT
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDTELINVTNKNSLFKLQSRY
VVERMDADLWALVLNPENPYRRQLIDQVVSTALPESKSPDQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNPNLQNLLILTAIKADKSRVMDYVNRLDNFDGPAVGEIAVGAELFE
EAFAIFKKFNLNVHAVNVLLDNIRSIDRAVEFASRVEEDEVWSQVGKAQLKEGLVSDAIE
SFIRADDATQFNDVILAANQARVFEDLVKYLHMVRRKVKEPKVDSELIYAYARIEKLGEI
EEFILQPNVANLQNVGDRLFDETLYEAAKIIFTHISNWGRLASTLVKLHQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIVQVDDLEEVSDYYQNRGRFDELISLMESG
LGLDRAHMGIFTELGILYAKYRSEKLMEHLKLFSTRINIPRLIRVCNEQKHWKELTYLHI
QYDEYDNAAATIMNHSPDAWDHMQFKDVCVKVANVELYYKAAHFYLQEHPDLLNDLLMVL
APRVDHTRVVDIMRKARNLHLVKPYMVAVQSANVAAVNEALNELYVEEEDYDRLRESIDL
HDNFDQISLAQKLEKHELIELRRVSAYIYKKAGRWRQSVALSKKDNLYKDAMETASQSGD
RDLAEELLSFFIEQQKKECFASCLFTCYDLIRPDVALELAWINNMIDFSFPYLLQFIREY
TSKVDDLIKDKLAADQEVKSKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGGPPGFNP
GMPPPFGGMPGYGMPPMGGY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgagcgctcccatcactatgaaagaggccctggtgctcacgagcttgggc
atcaatccccaatgcatcactttcaaccatgtcacgatggaatccgagaagtacatatgc
gtgagagagaccacgccgcagaacagcgtggttatcatcgacatgaacttgcctctgcag
cctcttcgccgacccattactgccgattcctcgctgatgaatcccatcactaaaattctg
gctctaaaagctcaaattcctggcacgagccaggatcatctccagatttttaacatagaa
atgaaggctaagatgaaatctcatcaaatgtcggaacaggtggttttctggaaatggata
acttcaaagatgcttgggcttgtcacgcagcaagccgtctatcactggtctatagaaggt
gattctgagccggtcaaggtgtttgatagaacggctaacctgtcgggaaatcaaattatt
aactaccgctgtgatccttctgagaagtggctagttctgataggcattgctccaggctct
cccgagcgtccacaactggtgaaaggaaacatgcaactcttttcagtcgatcagcagcga
agtcaagctttggaagctcatgctgcatctttcgctacattcaaggtctccggaaacgaa
gctccttccactctgatatcgttcgcaacgaagtcagttacgtctggcacgctagtatca
aagttgcatgttatcgaacttggtgcccagccagggaaggcagcgtttacaaagaaacaa
gcagacttgttcttccctcccgactttgcagacgacttccccgtctcgatgcagatctca
caaaagtatagccttatctatgttattacgaaactcggtcttctttttgtatatgatctg
gagactgcaacggctgtctataggaatcgtattagtccagatcccattttcctgacatcc
gattccccgtcaactgggggattttatgcagttaatcgtcgagggcaagttctattggct
actgttaacgaggcaactgtcgttcccttcgtcagcggtcagcttaacaatttagagctt
gcggtcaaccttgctaagcgtggcaaccttcctggagccgagaacctggttgtgcaacgg
tttcaggagttattccaacaaatgaagtacaaagaagctgcggagcttgcagctgagtcc
cctcaaggaatccttcgcacgcatgacactattacgaagttccagagtgttcctgtgcaa
cctggacagacgtcacctctgcttcagtattttggtacattgcttacaaaggggaaactc
aacgcttttgagtctctggagctttcacgtctcgttgtcactcaaaacaagaaaaacctt
ttggaaaattggttggctgatgataaactcgagtgcagtgaagaacttggtgatcttgtc
aagtcggttgataatgatatggccttaaaaatcttcatcaaagcaagggttacaccaaaa
gtggtcgcggcatttgcagaacgtggagagttcgataaaattctcatttattctaagcaa
gttggttatactccagattatcccttccttctgcaatctatattgcgaacggatcctcag
gcggccgtaaattttgctctcatgatggctcaaatggaaggcggatgtccaatggactac
aacgttattaccgatctttttctgcagcgaaacctgatacgtgaagcaacatccttttta
ctggatgttttgaagccgaaccttcccgagcatgcgatgttgcagacaaaggttctagag
ataaatctagtgacattcccgaacgtagcggatgcaattttggccaacggaatgtttagt
cactacgataggcctcggattgggcagctttgcgagaaggctggcctatacacgagagca
ttgcagcactatacggacctgaatgacatcaagcgtgtgattatcaacacacacgctatt
gaaccccaggctttagtggaattttttggaaccctctcgcgtgactgggctatggattgt
atgaaggaattgttgctggttaatatgcgaggaaatctgcaaatagttgtgcaggttgcc
aaagaatactcagaacagctaggcattggagcctgtgtgaagctttttgagcagtttaaa
tcatacgaaggtttatacttctttttgggatcctttttgagctcgagcgaggacccggat
attcacttcaaatatattgaagcagcagctaaaacgggccaactgaaagaggtagagcgt
gtcaccagggaatcgaatttctatgatgcagagaagaccaagaactttctgatggaagct
cgtcttcctgacgctcgtcctctcatcaacgtgtgtgatagattcggttacgttcctgat
ttgacacactacttgtattcgaacaacatgcttcggtatattgaaggctacgtccaaaag
gtcaatcctgcaaacgcacatctggtcgtgggccaacttttagatgatgaatgtcctgag
gattttattaaaaatctcatcctctctgttcgatcgttactaccggttgagcctcttgtt
gagcaatgcgagaaacgtaatcggctgagacttctcactcagtttttggagcacctggtt
agcgaaggtagccaagacgtgcatgtgcacaatgcgctcggaaaaattatcatcgatacg
aacaacaatcccgagcacttcttgactacaaatccgtactatgactcgaaagttgtcggg
aagtattgtgagaagcgggatcccaccctggcagtggttgcttaccgtcgtggtcagtgc
gacacagagcttattaatgttacgaataagaattccctgtttaagcttcaatcacgctat
gttgtggaacgaatggatgcggatctttgggctctagtattgaatcccgagaacccctac
agacgccaacttattgaccaagtagtatctaccgccttaccagagagcaagagtcccgat
caagtttcagcaacagttaaagcattcatgactgctgacttgcctcacgagcttattgag
ttgctggaaaagatcgtcctccaaaattcagcattcagtggcaacccgaacttgcaaaat
cttctgatattgactgccatcaaggctgacaagtcgcgggtcatggattacgtcaaccga
ctagacaacttcgatggtcctgccgttggagagattgctgttggtgcggagctgtttgag
gaagcgtttgctatcttcaaaaagttcaacttgaacgtgcatgctgtcaacgtgcttctt
gacaacatccgtagtatcgatcgtgctgtggagtttgcttcgcgagttgaggaggacgag
gtctggagccaagtaggaaaggctcagctgaaggaaggcctggtcagcgatgccatcgag
tcgtttattcgagcagacgatgcaacgcagttcaacgacgtcatactggcagcaaaccag
gctagagtttttgaggatctcgtcaagtacttgcatatggtgcggaggaaagttaaggag
cccaaggtggactctgagctcatttatgcgtacgcacggattgagaagctcggggagatc
gaggagtttattctgcagcctaatgtggccaacctgcaaaatgttggcgaccgtctcttt
gacgagacgctttacgaagctgcgaagattatcttcactcatatctccaactggggtcgt
cttgcaagtactctcgtcaagctccaccaattccaaggtgcagttgacgctgccaggaag
gccaacagtgcgaagacgtggaaagaagtttgcttcgcttgtgttgacgcggaagagttc
aggctcgcacaaatatgtggtctcaacgtcattgtccaggtggatgatttggaggaagtg
agtgactactaccagaataggggacgattcgatgaactgatttctctaatggaaagtggt
cttggactcgaccgcgcacacatgggtatatttacagagctcggaatattatatgccaag
tatcggtccgagaagcttatggaacacttgaagcttttctcaacccgaatcaacattcca
aggctcattcgcgtttgcaacgaacaaaagcactggaaagaactcacgtatctgcacatt
cagtacgacgagtatgacaatgccgctgcaactattatgaaccactctcccgatgcctgg
gatcacatgcagttcaaggatgtctgcgttaaggttgccaacgtggagctgtactacaaa
gctgcccacttctatcttcaagagcatcccgacctcttgaacgatctgttaatggtctta
gctccccgtgtcgatcacactcgtgtggtagacataatgcgcaaggctagaaaccttcat
ctcgtgaagccttacatggtggctgtgcaaagtgcaaatgtggccgctgtgaatgaggct
ctgaacgagctttacgtcgaagaagaagattacgaccgtctcagagaatccatcgatctt
cacgacaattttgatcaaatttctttggcacaaaagcttgaaaagcacgagcttatcgaa
ttgcgccgcgtctctgcctacatttacaagaaagcaggaagatggcgccagtctgttgcg
ctgtccaagaaggacaatctctacaaggacgcgatggaaactgcatcgcaatctggagat
cgtgatcttgccgaagaactgctgtcgttctttattgaacagcaaaagaaggaatgcttc
gcgtcctgcctgtttacatgttacgatttgatccggcccgacgtagcattggagcttgcc
tggataaacaacatgatcgacttctccttcccttacctgttacaattcatccgcgagtac
accagcaaggtggacgatctgatcaaagacaagctagcagccgaccaggaggtcaagagc
aaggagaaggaagagaaggatctagtggctcaacagaacatgtacgctcagctccttcct
ctggctctgcccgctcctccgatgcccggcatgggaggcggtcctccaggattcaacccg
ggaatgccacctccatttggtggaatgcctggctacggcatgcctcccatgggcggatat
tag
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integrated database retrieval system
