Selaginella moellendorffii: SELMODRAFT_158922
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Entry
SELMODRAFT_158922 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18758
DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_158922
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SELMODRAFT_158922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
9663186
NCBI-ProteinID:
XP_002987636
JGI:
158922
UniProt:
D8SWE2
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MKDPVAPQIFPEHWSLPKVNEAMQSGRVFSCSLRVNAHNRSEAYATVDGLSVDILIEGAC
AQNRALEGDLVALVLDPPNLWPRMKGLNNNRTDRVVTASSIAVTNQSFSSGEGVQVSREI
RLEEEVVIESVGSSNQVVESSEDSGSLLSGPGSTALEKVQALLQATPGKRPTGKVVSILS
KSRRRDAVVGFLSVKFQPPTRNQMVLTPVDAKFPKMVVLPDSLPEVIAQRLRDGDRKMGN
ELLAACVDRWDCNSPYPLAIITHCLGQAGELEAQTAAILFEHAVHSAEFPPEAMACLPRV
PWSIPKKELQRRRDLRSRRVFTIDPVTARDLDDALSVEHLGDGLTRVGVHIADVSYFVHA
GSGLDKEAQQRSTSVYLIEQVLPMLPRLLCEELCSLQPGVDRLAFSVMWDLDSTGQIVKQ
WIGRTAIKSCCKLSYGDAQEIIDGTFSEKPGLSGNFSWQEVAADIKTLYNIAKQLEESRI
RDGALRLDTGKLVFALDGDGNPHETSFYEQMESNKLVQEFMLLANVSVAKVISRAFPDCA
LLRRHPEPSSRKLLEFQEFCKKHGFVLKTDSSADLHASLEVLREELKDDPVLLSIVTLYA
TKPMQVAKYFCTGRDKDGDWGHYALAMPVYTHFTSPIRRYPDIVVHRTLTAALEAEKVLN
KSLTGPEDLVSTKDYEVLQLAASKHRISDPAEMALLADHCNERKMASKNVQEATDRLYLW
TMLQRRKGLLSDACVVGLGPKFMSLYVSKIAMERRLYYDEVEGLKVDWLENTGTLVLDYC
RPRQHSRKAKCRSISDVAVVSNPAMDPDDETGNLDRLTRIEPEAMPLTLRLFSHIPVLIH
ALGGDSSPLDIGVRVYVTSYFFS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatccagttgcaccacagatttttccagagcattggtcgcttcctaaagtaaat
gaagccatgcagtctgggcgtgttttttcttgctccttgagagtaaatgctcacaaccga
agtgaggcttacgccacagtcgacggactttccgtagatatcttgatcgagggagcctgt
gctcagaatcgtgcacttgaaggggatttagttgcacttgttcttgatccgcctaattta
tggcccaggatgaagggccttaacaacaatcggactgatcgagtggtaactgcgagtagt
atagctgtgacaaaccaaagtttcagtagtggtgaaggcgtacaggtttctagagagata
cgtttagaagaggaggtagtcatagaaagtgttggaagtagcaaccaggttgtagaaagt
agtgaggattcgggtagtttactgtcaggcccggggtcgacggcgctagaaaaagttcag
gcattgctccaagctacaccgggtaaaaggcctactgggaaagtagtgtctattttatca
aagtctcgccggcgtgatgcggtggtcggatttctctctgtcaagttccagccgccaacg
agaaatcaaatggttctcactccagttgatgccaagtttccgaagatggtggttttacct
gatagccttccggaagttatagctcaaaggttgcgggacggggatcgtaagatggggaat
gagcttttagcagcgtgtgttgatcgctgggactgtaacagtccttatcctctcgcgatc
atcacacattgcttgggacaagctggggaactagaggcacagacagcggctattttattc
gagcacgcggttcacagtgccgagttccctccggaggcgatggcttgtcttcctcgtgtt
ccgtggagtattccgaagaaggagctacagagacgaagggacttgcgctcacgtagagtg
ttcacaatcgatccagtcactgccagggacttggacgatgcactgtcggtggagcatctc
ggggatggtttaacgagagttggagtacacatcgcagatgtttcttacttcgtccatgct
ggctcgggtttagacaaagaagcacagcagcggtcgacgagtgtgtacttgatcgaacag
gtgcttccaatgcttcctcgactgctctgcgaggagctctgctcgctacagcccggagta
gacaggttagcattttcggtgatgtgggatctagattcaacaggacagattgtcaagcag
tggataggtagaactgcgatcaagtcatgctgcaagctaagttatggtgatgcccaagag
atcattgacgggactttcagcgagaaaccaggtctttcgggaaacttcagctggcaggaa
gtggccgctgatatcaagactttgtacaacattgccaagcagctagaagagagtagaatt
agggacggagcactacgtctagacactgggaagctcgtctttgctctagatggggatggg
aatccccacgagacgagcttctacgagcagatggaatccaacaagctggtgcaggagttc
atgcttctggctaacgtgagcgtcgccaaagtgatatcgagagcgtttcccgactgtgca
ctcctgaggcgtcatcctgaaccgagctcacgtaagcttctcgagttccaagagttttgc
aagaagcacgggtttgtgctgaagacggactcttcggcggacttgcatgcgtccctggaa
gtactgagggaggagctcaaggacgacccggttcttctcagcatcgttacactctacgcc
accaaaccgatgcaggtggcgaagtacttttgcacgggccgggacaaggacggtgactgg
ggtcactatgccttggccatgcctgtttacacgcacttcacatctccgattcgaagatat
cccgacatcgtcgtgcaccggacactgacagccgctctcgaggccgaaaaggtgttgaac
aaaagcctcacaggtcccgaggatctggtctcaaccaaggactatgaggtactccagttg
gctgcttcaaagcacaggatctctgatcccgctgagatggctttgcttgcggaccattgc
aacgaaaggaaaatggcaagcaagaacgttcaagaggcgactgacaggctctacctgtgg
actatgctacagagaagaaagggtctgttatcagatgcgtgcgttgttggtctgggacca
aagttcatgtcgctgtacgtctccaaaatcgcgatggagcgccgtttatactacgacgaa
gtagagggtctcaaggtagactggctcgagaacactggtacactggttctggattactgc
cgcccgaggcaacactctcgaaaggccaagtgccgaagcatctctgacgtcgcagttgtg
tccaatccggcaatggatcctgacgacgagactggtaatctcgacaggttaaccaggatc
gagccagaagccatgcctctcacccttcgcttgttctcacacatcccagttcttatccat
gctctcggtggtgatagctcccctctcgacataggtgttcgtgtctacgttacctcatac
ttcttctcctag
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