Selaginella moellendorffii: SELMODRAFT_160351
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Entry
SELMODRAFT_160351 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_160351
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_160351
Factors involved in mRNA localization
Other mRNA localization factors
SELMODRAFT_160351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
9637648
NCBI-ProteinID:
XP_002989688
JGI:
160351
UniProt:
D8T282
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MEEAVAALSTFSLEGNQPDIQGLAVTLLTGKNASQSPLDYEDVAAYQLQLTEDSKSINQL
NVLVEQGNEMVSILYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDIEIGRLRDIQRWQ
TTAASKLAGNMQKFCRPERRINGPTVTHMWCILKLLDVLLQLDHLKNAKASIPNDFSWYK
RTFTQISTQWPDTDSMREELDDLQIFLSTRWAILLNIQAELFRVNNLEDLLQVLINFCLD
ALESDHVVLYSERHVLLRVLPVLVVLAISSEKEGDSTFKKIKINRLIRVFRSDPVIPAFP
DLHLSPASMLKELSPYFRKVAAQSRLTSLPAPHELAPREALEYPFSEYLIIHHMPAIRFA
HDEFCLHFAAAINKLQLLKCARNVDEALSTKIKEDVYMAILEGFQCLSEWTGRVWEQCAW
KFSRPSKEATPYDEDVSAVVTDYEKVVRCNYSPEERKAMVELISYIKGVGSMLEHVDTQV
AETVCEVIHSQLQDFVQNKLSLMLRTSMKKKKELSRIVTEMRTIAADWTNSNGDQEKGSF
RKTKDETDRFPITVRATAPTAAQLHCLQFLIHELISGSPKKAAVFFGSNETEIASADMKQ
LDLFFNKLAFYPYILDYKATIFHVTDLGFIWFREFYLETSRVIQFPIECSFPWMLVDYIL
ESQDAALLESVLVPFDIYNDSAEHALRRLKQRFLYDEVEAEVDLCFDQLVFKLSEHIFSY
YKSRASSKQLDATFVASSELQDKFRVFPKRYEPLFQMRRVQILGRDIDLTFLIEQRLNKI
FRENLDFLLERFESHDLCTIVELDHLIEILRATHCLLADQLTLDPFNLILEEMMENISMV
SFSSRLASQIFSEIQNDVVPNFILCNSSLRLIRSPKACQRVFRRAPVPHADYSFLCGTPD
LNMAHAMYTDLFSKFFGLPHMLCIVKLLGSRSLPWLIRALLDHLSQKITSSLDSSVGDLR
GAMPKAINLPTPEAGVAGAMKILKEQLQWVTSYEGKVNFIECLKEIGTLLFLMSLLDMAM
KETETSQMVQVAPWLGIAPGPNGLQRYAADATDSPFLALFKEAASACAAHPLCLSPSTFV
AMGKQAEVTGSLYMKNIQTGSVLEYTLAYLSVVLDSFREKWSSPSKTGLIEITTSKEYHR
IYSGIQFVFCGESLAEAGPNFECFGDSVAWGGCAIVYFLGQQQRFELLDFIYHLLSVEEA
ESAIHHDRSRKPALVYGPSYGQELEDFLDNARRARGLNNHVFSLLRARSPQEDKSASMIK
QSGSVVHRVKYPNTPSAFDSLPLKGQGAEAPRATT
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcggtggcagcgctatccacattttctttggagggcaaccagccggacatt
caagggcttgctgtcacgcttctcactggcaagaatgcgtctcaaagtcctctcgattac
gaggatgttgctgcttaccagctacaactcacggaagactccaagtcgatcaatcagctg
aatgtgctggtggagcaaggcaacgagatggtttctatcctctatacgtatcgcagctgt
gtcaaggctcttccacagctccccgactccatgaaacagagccaggcagatttgtacctg
gaaacgtaccaagtgctcgacattgagatcggtcgcttacgtgacatccagcgctggcaa
acaacagccgcgtcaaaactcgcaggcaatatgcaaaagttctgtcggccggagagaaga
attaatggtccaaccgtgacacatatgtggtgtattctaaagcttctcgatgttcttttg
caactcgaccatttgaagaatgcaaaagcaagcatcccaaatgatttttcgtggtacaag
aggacgttcactcaaataagcacccagtggccggatacggattccatgagagaagaactg
gatgacctgcagattttcctgagtacaagatgggccatcttgcttaatatacaggcagaa
cttttccgagtgaacaacttggaagacctccttcaagttttgatcaacttctgcctggat
gcattggagtccgaccatgttgtcctttactccgagaggcatgtattgctcagggtgcta
cccgttctggtggttctcgccatttcctctgagaaagaaggcgactcaacattcaagaag
atcaaaataaacaggctcatccgggtgtttcggagtgatccggtaattcccgcatttcca
gatcttcacctttcgcctgcaagcatgctgaaagaactgtcgccttactttcggaaagtt
gcggctcaaagcagactgacgtcgttgcctgcaccccacgaacttgctccccgtgaagct
ttagaatatcctttctctgagtacctgatcatacatcacatgcctgccattcgcttcgct
catgacgagttctgcttgcattttgctgctgcgataaacaagctccaacttctaaagtgt
gccagaaacgtagacgaggctctcagtaccaagatcaaggaggatgtctacatggcaatt
cttgaaggctttcagtgtcttagtgaatggacaggccgcgtgtgggagcagtgtgcttgg
aagttctccagaccttcaaaagaagccactccatacgacgaggatgtctcagctgttgtc
acagactatgagaaggttgtacgctgcaactattcccccgaagaaaggaaagctatggtg
gagctgataagctatatcaagggtgttggctccatgctggagcacgttgatactcaagtt
gccgagacagtgtgcgaagtcatacattcgcaattgcaagactttgtgcaaaacaagctt
tccttgatgctgcgaacttccatgaagaaaaagaaagaactatctcgaatcgttactgag
atgaggaccatcgcagcggactggacaaatagtaatggtgatcaagagaaaggatctttc
aggaagacgaaagatgaaactgatagatttccaatcacggttcgggctacagctcctacg
gctgcccagcttcattgcctgcaatttctgatccacgaacttatctctgggagtcccaag
aaagctgcagtatttttcggaagtaacgaaactgagatcgcatcagccgacatgaaacaa
ctcgacttgttcttcaacaagctggcgttttacccctacatcctcgattacaaagctacg
atttttcatgtcaccgatctcggatttatctggttccgtgagttttatctggagacttct
cgtgtaatacagtttcctatcgagtgttcttttccgtggatgctggtggattatatacta
gaatctcaagatgctgctttactcgagagcgtcttggtgccatttgatatttataatgac
tctgcagagcatgcgctccgtaggctcaaacaacggtttctatacgatgaggtcgaggcc
gaggttgatttgtgctttgatcagctggtttttaaattgagtgagcacatattttcctac
tacaaaagtcgggcttcaagcaagcaacttgatgcaacgttcgtcgccagttccgaactt
caggacaaattccgggtatttccaaaacgttacgagccattgtttcagatgcggcgagtt
cagatattgggacgggacatagaccttacttttctcattgagcagcgactaaacaagatt
ttccgcgaaaatcttgactttttacttgagcggtttgaatcccatgacctctgcaccatt
gtggagctcgaccatttaattgaaattctccgagctacgcattgccttcttgcagatcag
ctcactctagatccattcaatctgatcctggaggaaatgatggagaatatttcaatggtg
tccttttcttctagactagcatcgcagatattctcggagattcaaaatgatgttgttccg
aacttcattttatgcaactcaagcttaaggctcatcaggtcacctaaggcctgccagcga
gtctttcgacgtgctccagttccccacgcggattacagtttcctttgtggcactccggac
ttgaacatggcacatgccatgtacaccgatcttttcagcaagttctttggattgcctcac
atgctgtgcatagtcaagctgctgggttctcgctcgctaccttggcttatccgagctttg
ttggatcacctttctcaaaagatcacgtcgtctctagattccagtgttggtgatcttcgt
ggagccatgcccaaggctataaacctcccgactccagaagctggtgttgcgggggcaatg
aaaatcctgaaggagcaacttcagtgggtaacaagctacgaagggaaagttaactttata
gaatgtctgaaggaaattggaacgttgctcttccttatgtcgttgctggatatggcaatg
aaagaaaccgagacgagtcagatggtacaagtagcaccttggctgggcattgctccggga
ccgaatggccttcagagatacgctgctgacgccacagatagcccctttctggctcttttt
aaagaggccgccagtgcgtgtgcagcacatccactgtgcttgtcgccatctacgttcgtt
gcaatggggaagcaagctgaagttacaggctcgctgtacatgaaaaacatccaaactggt
agcgtccttgagtacacactggcgtatctgagcgttgtactcgatagctttcgggagaaa
tggagctccccatcgaagacggggctcatcgaaatcacaacatccaaggagtaccatcgc
atatacagtggcattcaattcgtgttttgtggcgagtcacttgccgaggccggccccaac
tttgagtgttttggtgactcggtggcttggggtggctgcgctattgtatacttccttggg
cagcagcaacgctttgagctattggacttcatttatcatctgttaagtgtagaagaagcc
gagtccgccatccatcacgacagatcaaggaagccagctctagtgtatggtccttcatat
ggacaggagctggaggactttctggataatgcaagaagagcaaggggtctaaataatcac
gtattctcactactgagagcccgctctcctcaagaagacaagtcggcgtccatgatcaag
cagagcgggagcgtcgtgcacagggtcaagtatccaaacactccttcggcctttgattcg
ctccctctcaaagggcagggagccgaggctccaagagctacaacatag
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