Selaginella moellendorffii: SELMODRAFT_160867
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Entry
SELMODRAFT_160867 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_160867
03015 mRNA surveillance pathway
SELMODRAFT_160867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_160867
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_160867
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SELMODRAFT_160867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
9631227
NCBI-ProteinID:
XP_002990446
JGI:
160867
UniProt:
D8T4B5
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MDPAQENAPTPAPAPAPAPKTNWADEADLADLGALGISDGAESKAEEATPVKPKSEKLND
EVETKIEKELVEGNSLYTSAKTFEELKISEPLLRGIYSEMKFERPSKIQAETLPLIMNPP
HRNLVAQAHNGSGKTTCFVLGMLSRVNTSLHEPQALCVCPTRELALQNQAVLERMARFTQ
ITSTCIIPPTENIKSSLRGHIHDQVIFGTPGSLERAILNDRNLDVQHLNVLVFDEADHML
DQNGFRDFSMKLLRRINKQAPSCQLLLFSATFSEKVKNFVSKSIPIANRVFVEKLELSLD
VIKQYRVNCPTERAKFEVLKDRIYPIAEKLGQSIIFAESRRSVTELHEKLEADGHKCSSI
HGGYKPDVRDKIIDEFRQGITRILISTDVLSRGFDVAQVTLVVNFDLPLARDYHKQPDYE
TYLHRIGRSGRFGRKGAAFNLVVTQEDTRMLSLIEEHFGKTIPPVAWDDDEAFEKVLKEA
GLA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcacaggagaatgcgcccactcccgcgcccgcgcccgcgccggctcccaag
acgaattgggcggatgaagcagacctggcggatttgggagcgctagggatctctgatggc
gccgaatcgaaagcagaggaggccacgcccgtgaagccgaaatccgagaagctcaatgac
gaggtggagacgaagatcgaaaaggagctcgtcgagggcaacagcttgtatacctcggcc
aagacgtttgaggagcttaaaatctccgagccgctgctgagagggatctactccgagatg
aagtttgagaggccgagcaagatccaggccgagacgctgccgctgatcatgaatcccccg
catcgcaatctggtggctcaagcgcacaatggctctgggaaaactacatgctttgttctc
ggcatgctaagtcgcgtcaacacttctttgcacgaaccgcaagctctgtgcgtttgtcca
acacgagagttggcactccagaaccaagcagtgctggaaagaatggcacggtttactcaa
atcacatcgacctgtatcatacctcctacggaaaatatcaagagctcactccgcggacat
atacacgaccaagttatcttcggaactcctgggtctttggagagggcgattctcaacgac
agaaacttggacgtgcaacacttaaatgttttggtgtttgatgaggctgaccatatgtta
gaccagaatgggtttcgtgacttttccatgaagctattgcgacgcatcaacaagcaagca
ccgagttgccagctcttacttttctctgcaactttcagcgaaaaggtgaagaatttcgtg
tccaaaagcatcccgatagcaaaccgagtattcgtcgaaaagctcgagctctcgctggac
gtcatcaagcagtaccgtgtaaattgtcctactgaaagggccaagtttgaggttctcaag
gatagaatctaccccattgccgagaagctcgggcagtcgatcatcttcgccgagtcacga
agaagtgtgaccgaactgcacgagaagctggaagcagacggtcataagtgcagttctatc
cacggaggatataaacccgacgtccgtgacaagattatcgacgagttccgacagggaata
accaggattttgatctcaactgatgttctttcgagagggtttgacgtcgcacaggtcact
ttggtcgtaaacttcgaccttccactcgcgcgggattatcacaagcagccggactatgaa
acttatctacaccgcatcggccgaagtggaagatttggaagaaaaggagccgcattcaat
ctggttgtcacacaggaggacacgaggatgctatctctgatcgaggagcactttggcaaa
accattccaccagtggcctgggatgacgacgaagctttcgaaaaggttttgaaggaggcc
ggactagcttaa
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integrated database retrieval system
