Selaginella moellendorffii: SELMODRAFT_161156
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Entry
SELMODRAFT_161156 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_161156
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
SELMODRAFT_161156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
TPR_16
TPR_14
TPR_8
TPR_19
TPR_7
TPR_17
TPR_6
TPR_11
TPR_10
TPR_9
RPN7
ANAPC3
TPR-S
Motif
Other DBs
NCBI-GeneID:
9659143
NCBI-ProteinID:
XP_002990841
JGI:
161156
UniProt:
D8T5B7
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MECVYIPVQNSQEEVRVGLDQLPRDPADIVDILKAEQAPLHLWLTFAREYFKQDKVKEFL
QILEEGSSPEIDEYYSDVKYDRIAILNALGAYYTNLGKIEFKQRDEHFIRATHYYNKATR
IDYDEPTTWAGKGQLLLAKGDYEQMFDVFKIVLDVRPDNLLALLGQACAQFNRGRFQESL
GLYKRVLQMHPGCPASLDPENLDALVALGIMDINANDAESVQEGTKKMLEAFEIYPYCAT
ALNHLANHYFYTEQHGVVEQLMETALASTDNALIKSQSYFNLARSYHSKGDYDKAAAYYR
ASVQELKSPKDFILPYYGLGQVQLKLNDLKSALSNFEKVLDVHPENCETLKVVGYIHLQQ
GRNDKALESFRKAAKVSPRDVDAWIEIGELLVSTDFSAALDAFKTAHNLQTKSGEKVPLG
LLNNIGVLHFERGEYKLAEGAYYEALGEGPWKEFNENNFSTITGGDGPLEKFDVFQRIEE
QGTSLDIPAEKVTVLFNLARLFEQLHETEKANLLYQLILFKHPSYVDAYLRLAAMAEARN
NLSLSMELVQKGLKEDDNDVDILSFRGSLELKADEWLKAKDTLKGIQSVSDGKDSFSNLA
LGNWNYFAATRSEKRDPKLEATHLEKARELYQKVLTQKSNNMYAANGLGIVFSEKGMFDI
AKDIFTQVQEAASGNVAVEMPDVWVNLAHVYLAQGHFGLAVKMYQNCLRRFYFNTETNIL
LYLARTHYEAEQWQECKRVLMHAIHMAPSNYMLRFDAAITMQKFSTATLQKQKRTADEVR
QSVAEVKNAVRLFTQLSLISSHHMHGFDEKKIGMHVDYCKHLLDAAKLHLEAAEREEQQN
RQKQEVARQLAMAQEAQRKADEERKLQIEKRKREEEHRRVMEQELHFQRVKVSKHFRAFE
TKCSAFQETWKYNLDDEGNERKSRRKEKKKRKKKQRNEQAEEEEVEAEEGTQPEPEEEEA
EAEAPVASEEEEE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgtctacatccccgtccagaattcgcaagaggaggtgcgcgtagggctcgat
cagctgccgcgcgatccagccgacattgtcgacatcctcaaggccgagcaagcgccgctc
catctctggctcacattcgcgcgcgagtatttcaaacaggacaaagtcaaggagttcctg
cagatattggaagaaggctccagtccagagatcgatgagtactatagcgatgtgaagtac
gatcgaatagccattctaaatgcgctaggtgcttactacacgaaccttgggaagatagaa
tttaagcagcgcgatgagcactttattcgcgctacacactactacaacaaagccactaga
atcgactatgacgagcccacgacatgggccggaaaaggtcagctgctccttgcaaagggg
gactacgagcagatgtttgacgtttttaagatcgtgctggatgtgcggcctgataacctc
ctagcgttgcttggccaagcctgtgcgcaatttaaccgtggacgtttccaagaatcgctg
ggactgtataagagagtattacagatgcatccgggttgtcccgcatctctggaccctgag
aatttagatgcccttgtcgcgctgggaattatggatatcaacgctaacgatgcggagtct
gttcaggaaggcacaaagaaaatgctcgaggcttttgagatatatccgtattgcgcaacg
gctctcaatcaccttgcaaatcattatttttatacggagcaacacggtgttgttgagcag
ctgatggaaaccgctttggcgtcaactgacaatgcgctcataaaatcgcagtcctatttt
aatttggctcgatcgtatcacagtaagggagattacgacaaagctgccgcctactacagg
gcctccgtgcaggagctgaagtctccaaaggattttatacttccttattatggcttgggg
caggtccaactcaaactaaatgacttgaagtcagccttgtcaaattttgaaaaggttttg
gacgttcatcctgagaactgtgaaactttgaaggtcgtcgggtacatacacttgcagcaa
ggtagaaacgataaggcattagaaagcttcagaaaagctgccaaagtgagccctcgggat
gttgatgcatggattgaaataggggagctccttgtatctacagatttttctgcagctttg
gatgcgtttaagacggcacacaatctgcaaaccaagagtggggagaaagttccgcttggc
cttttgaacaacatcggcgtgcttcattttgagcgtggtgaatacaagctcgcagaagga
gcttattatgaagcattaggtgaaggtccatggaaagaattcaatgaaaataatttttct
accattaccggaggagacgggcctttggaaaaatttgatgtatttcaacgaattgaagag
caaggaacctcgctagacataccagctgaaaaagtaactgttctcttcaacttggcacgc
ttatttgagcagttgcacgagacggaaaaagcaaatttattgtatcagcttattcttttc
aagcatccgagttacgtggatgcttacttgcgtcttgcagccatggctgaagcaagaaat
aacttgagtctcagcatggaattggtacagaaagggcttaaagaagacgacaatgatgtg
gatattctatcttttcgaggaagccttgagctgaaagcagacgaatggctcaaagctaag
gatactctgaagggaatacagagtgtctcagacgggaaagatagtttttcgaacctggcg
ctgggaaactggaattatttcgcagcaactcgtagtgaaaagcgggatcctaagttggaa
gccacacacctggaaaaagctagagaattgtatcaaaaggttttgacgcaaaagtccaac
aacatgtacgcagcaaacggactaggaatagttttctccgagaaaggaatgttcgacatt
gccaaggatatcttcactcaggtgcaagaagcagcttctggtaacgttgctgtggagatg
cctgatgtctgggtaaatcttgcgcatgtatatcttgctcagggtcatttcggcttggca
gtaaaaatgtatcagaattgtctacgaaggttctactttaacaccgaaacgaacatcttg
ctttatctggcgcgcacgcattatgaagcggagcaatggcaagaatgcaaacgcgtactt
atgcatgctattcatatggcaccgtcgaattacatgctccggttcgatgctgcaatcact
atgcaaaagttctctactgcaacacttcaaaaacagaaacgcactgccgatgaggttcgt
caatccgtagcagaagtgaaaaatgcagttcgtctcttcacccagctatcactgataagt
tctcatcacatgcacggattcgatgagaagaagatcggaatgcatgtcgactactgcaag
catctgctagatgctgcaaagctccatcttgaggctgctgagcgggaagagcaacaaaac
cggcaaaagcaagaagtggctcggcagcttgcaatggctcaagaagctcaaaggaaagcc
gatgaagagcgaaaactccagattgagaaacgaaagcgagaagaagagcatcgcagagtc
atggaacaagagctacacttccagcgcgtgaaggtgagcaagcacttccgcgctttcgaa
actaaatgcagtgctttccaggaaacgtggaagtacaacctcgatgacgaaggcaacgag
aggaaatcgcgaaggaaggagaagaagaagaggaagaagaagcagcggaacgagcaggcc
gaggaggaggaagtggaggccgaggaaggcacgcaaccagagcccgaggaggaggaggcg
gaagcggaagctccggtagcgtcggaggaagaggaggaa
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integrated database retrieval system
