Selaginella moellendorffii: SELMODRAFT_161939
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Entry
SELMODRAFT_161939 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_161939
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_161939
Factors involved in mRNA localization
Other mRNA localization factors
SELMODRAFT_161939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
9633428
NCBI-ProteinID:
XP_002991792
JGI:
161939
UniProt:
D8T865
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MEEAVAALSTFALEGNQPDIQGLAVTLLTGKNASQSPLDYEDVAAYQLQLTEDSKSINQL
NVLVEQGNEMVSILYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDIEIGRLRDIQRWQ
TTAASKLAGNMQKFCRPERRINGPTVTHMWCILKLLDVLLQLDHLKNAKASIPNDFSWYK
RTFTQISTQWPDTDSMREELDDLQIFLSTRWAILLNIQAELFRVNNLEDLLQVLINFCLD
ALESDHVVLYSERHVLLRVLPVLVVLAISSEKEGDSTFKKIKINRLIRVFRSDPVIPAFP
DLHLSPASMLKELSPYFRKVAAQSRLTSLPAPHELAPREALEYPFSEYLIIHHMPAIRFA
HDEFCLHFAAAINKLQLLKCARNVDEALSAKIKEDVYMAILEGFQCLSEWTGRVWEQCAW
KFSRPSKEATPYDEDVSAVVTDYEKVVRCNYSPEERKAMVELISYIKGVGSMLEHVDTQV
AETVCELIHSQLQDFVQNKLSLMLRTSMKKKKELSRIVTEMRTIAADWTNSNGDQEKGSF
RKTKDETDRFPITVRATAPTAAQLHCLQFLIHELISGSPKKAAVFFGSNETEIASADMKQ
LDLFFNKLAFYPYILDYKATIFHVTDLGFIWFREFYLETSRVIQFPIECSFPWMLVDYIL
ESQDAALLESVLVPFDIYNDSAEHALRRLKQRFLYDEVEAEVDLCFDQLVFKLSEHIFSY
YKSRASSKQLDATFVASSELQDKFRVFPKRYEPLFQMRRVQILGRDIDLAFLIEQRLNKI
FRENLDFLLERFESHDLCTIVELDHLIEILRATHCLLADQLTLDPFNLILEEMMENISMV
SFSSRLASQIFSEIQNDVIPNFILCNSSLRLIRSPKACQRAFRRAPVPHADYSFLCGTPD
LNMAHAMYTDLFSKFFGLPHMLCIVKLLGSRSLPWLIRALLDHLSQKITSSLDSSVGDLR
GAMPKAINLPTPEAGVAGAMKILKEQLQWVTSYEGKVNFIECLKEIGTLLFLMSLLDMAM
KETETSQMVQVAPWLGIAPGPNGLQRYAADATDSPFLALFKEAASACAAHPLCLAPSAFV
AMGKQAEVTGSLYMKNIQTGSVLEYTLAYLSVVLDSFREKWSSPSKTGLIEITTSKEYHR
IYSGIQFVFCGESLAEAGPNFECFGDSVAWGGCAIVYFLGQQQRFELLDFIYHLLSVEEA
ESAIHHDRSRKPALVYGPSYGQELEDFLDNARRARGLNNHVFSLLRARSPQEDKSASMIK
QSGSVVHRVKYPNTPSAFDSLPLKGQGAEAPRATT
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcggtggcagcgctatccacatttgctttggagggcaaccagccggacatt
caagggcttgctgtcacgcttctcactggcaagaatgcgtctcaaagtcctctcgattac
gaggatgttgctgcttaccagctacaactcacggaagactctaagtcgatcaatcagctg
aatgtgctggtggagcaaggcaacgagatggtttctatcctctatacgtatcgcagctgt
gtcaaggctctcccacagctccccgactccatgaaacagagccaggcagatttgtacctg
gaaacgtaccaagtgctcgacattgagatcggccgcttacgtgacatccagcgctggcaa
acaacagccgcgtcaaaactcgcaggcaatatgcaaaagttctgtcggccggagagaaga
attaatggtccaaccgtgacacatatgtggtgtattctaaagcttctcgatgttcttttg
caactcgaccatttgaagaatgcaaaagcaagcatcccaaatgatttttcatggtacaag
agaacgttcactcaaataagcacccagtggccggatacggattccatgagagaagaactg
gatgacctgcagattttcctgagtacaagatgggccatcttgcttaatatacaggcagaa
cttttccgagtgaacaacttggaagacctccttcaagttttgatcaacttctgcctggat
gcattggagtccgaccatgttgtcctttactccgagaggcatgtattgctcagggtgcta
cccgttctggtggttctcgccatttcctctgagaaagaaggcgactcaacattcaagaag
atcaaaataaacaggctcatccgggtgtttcggagtgatccggtaattcccgcatttcca
gatcttcacctttcgcctgcaagcatgctgaaagaactgtcgccttactttcggaaagtt
gcggctcaaagcagattgacgtcgttgcctgcaccccacgagcttgctccccgtgaagct
ttagaatatcctttctctgagtatctgatcatacatcacatgcctgccattcgcttcgct
catgacgagttctgcttgcactttgctgctgcgataaacaagctccagcttctaaagtgt
gccagaaacgtagacgaggctctcagtgccaagatcaaggaggatgtctacatggcaatt
cttgaaggctttcagtgtcttagtgaatggacaggccgcgtgtgggagcagtgtgcttgg
aagttctccagaccttcaaaagaagccactccatacgacgaggatgtctcagctgttgtc
acagactatgagaaggttgtacgctgcaactattcccccgaagaaagaaaagctatggtg
gagctgataagctatatcaagggtgttggctccatgctggagcacgttgatactcaagtt
gccgagacagtatgcgaactcatacattcgcaattgcaagactttgtgcaaaacaagctt
tccttgatgctgcgaacttccatgaagaaaaagaaagaactatctcgaatcgttactgag
atgaggaccatcgcagcggactggacaaatagtaatggtgatcaagagaaaggatctttc
aggaagacgaaagatgaaactgatagatttccaatcacggttcgggctacagctcctacg
gctgcccagcttcattgcctgcaatttctgatccacgaacttatctctgggagtcccaag
aaagctgcagtattttttggaagtaacgaaactgagatcgcatcagccgacatgaaacaa
ctcgacttgttcttcaacaagctggcgttttacccctacatcctcgattacaaagctacg
atttttcatgtcaccgatctcggatttatctggttccgtgagttttatctggaaacttct
cgtgtaatacagtttcctatcgagtgttcttttccgtggatgctggtggattatatacta
gaatctcaagatgctgctttactcgagagcgtcttggtgccatttgatatttataatgac
tctgcagagcatgcgctccgtaggctcaagcaacgctttctatacgatgaggtcgaggcc
gaggttgacttgtgctttgaccagctggtttttaaattgagtgagcacatattttcctac
tacaaaagtcgggcttcaagcaagcaacttgatgcaacattcgtcgccagttccgaactt
caggacaaattccgggtatttccaaaacgttacgagccattgtttcagatgcggcgagtt
cagatattgggacgggacatagaccttgcttttctcattgagcagcgactaaacaaaatt
ttccgcgaaaatcttgactttttacttgagcggtttgaatcccatgacctctgcaccatt
gtggagctcgaccatttaattgaaattctccgagctacgcattgccttcttgcagatcag
ctcactctagatccgttcaatcttatcctggaggaaatgatggagaatatttcaatggtg
tcgttttcttctcgactagcatcgcagatattctcggagattcagaacgatgttattccg
aacttcattttatgcaactcaagcttaaggctcatcaggtcacctaaggcctgccagcga
gcctttcgacgtgctccagttccccacgcggattacagtttcctttgtggcactccggac
ttgaacatggcacatgccatgtacaccgatcttttcagcaagttctttggattgcctcac
atgctgtgcatagtcaagctgctgggttctcgctcgctaccttggcttatccgagctttg
ttggatcacctttctcaaaagatcacgtcgtctctagattccagtgttggtgatcttcgt
ggagccatgccgaaggcgataaacctcccgactccagaagctggtgttgcgggggcaatg
aaaatcctgaaggagcaacttcagtgggtaacaagctacgaagggaaagttaactttata
gaatgtctgaaagaaattggaacgttgctcttccttatgtcgttgctggatatggcaatg
aaagaaaccgagacgagtcagatggtacaagtagcaccttggctgggcattgctccggga
ccgaatggccttcagagatacgctgctgacgccacagatagccccttcctggctcttttt
aaagaggccgccagcgcgtgtgcagcacatccactgtgcttggcgccatctgcgttcgtt
gcaatggggaagcaagctgaagttacaggctcgctgtacatgaaaaacatccaaactggt
agcgtccttgagtacacactggcgtatctgagcgttgtactcgatagctttcgggagaaa
tggagctccccatcgaagacggggctcatcgaaatcacaacatccaaggagtaccatcgg
atatacagtggcattcaattcgtgttttgtggcgagtcacttgccgaggccggcccgaac
tttgagtgttttggtgactcggtggcttggggtggctgcgctattgtatacttccttggg
cagcagcaacgctttgagctattggacttcatttatcatctgttaagtgtagaagaagcc
gagtccgccatccatcacgacagatcaaggaagccagctctagtgtatggtccttcatat
ggacaggagctggaggactttctggataatgcaagaagagcaaggggtctaaataatcac
gtattctcactactgagagcccgctctcctcaagaagacaagtcagcgtccatgatcaag
cagagcgggagcgtcgtgcacagggtcaagtatccaaacactccttcggcctttgattcg
ctccctctcaaaggccagggagccgaggctccaagagctacaacatag
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integrated database retrieval system
