Selaginella moellendorffii: SELMODRAFT_162307
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Entry
SELMODRAFT_162307 CDS
T01496
Symbol
CHR11-2
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_162307 (CHR11-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_162307 (CHR11-2)
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_162307 (CHR11-2)
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
SELMODRAFT_162307 (CHR11-2)
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
SELMODRAFT_162307 (CHR11-2)
RSF complex
SELMODRAFT_162307 (CHR11-2)
WICH complex
SELMODRAFT_162307 (CHR11-2)
B-WICH complex
SELMODRAFT_162307 (CHR11-2)
NORC complex
SELMODRAFT_162307 (CHR11-2)
BRF complex
SELMODRAFT_162307 (CHR11-2)
NuRF complex (fruit fly)
SELMODRAFT_162307 (CHR11-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
SWI2_SNF2
HDA2-3
CHDII_SANT-like
AAA_14
Occludin_ELL
DBINO
Motif
Other DBs
NCBI-GeneID:
9661750
NCBI-ProteinID:
XP_002992415
JGI:
162307
UniProt:
D8T9X0
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MADEADGDDDSDDELGSPSKREIARREKERLKELKEKKKKEVDKFLKKQNSLVDADMASF
RCRLKFLLEQTEIFAHFAQGAEKAKAKKAGGKGRHASKMTEEEEDAEYLKEEEIALGDGA
GGSGGTRLVAQPACIIGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY
LHESRGISGPHMVVAPKSTLGNWMNEIRRFCPVLRAFKFHGTQDERAQQRDYQLVAGKFD
VCVTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTMRLFSTNYRLLITGTPLQ
NNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVIQQLHKVLRPFLLRRLKSDVE
RGLPPKKETILKVGMSQMQRNYYKALLQKDIDAINTGGERRRLLNIAMQLRKCCNHPYLF
QGAEPGPPYFTGEHLVENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLDILEDYCIFRG
YPSCRIDGGTSGEDREFAIEAFNREGSEKFIFLLSTRAGGLGINLATADIVILYDSDWNP
QVDLQAQDRAHRIGQKKEVQVFRFCTQYTIEEKVIERAYKKLALDALVIQQGRLAEQRAV
NKDELLQMVRFGAEMVFSANDSTITEEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMD
DTAEFYDFDGNDDKEEGKVDFKKLVADNWIEPPKRERKRNYSESDYFKQAMRTGGSSKSK
EPRIPRMPQLHDFQFFNIHRLTELYEKEVKFRLKTQKEGNAETEEIEDGEPLTAEEQEEK
EQLLQEGFCTWTRRDFNAFVRGCEKYGRFDFASIANEMEGKTEEEVERYCRVFQERYKEL
NDYDRILRAIERGEARIARKDEIMRTIGKKLDRYKNPWQELKIQYGQNKGKLYNEECDRF
LICMTNKLGYGNWDEIKTAIRMSPIFRFDWFIKSRTPGELARRCDTLIRLIEREIQELDR
HTRKDQKLVKNASPARRSWPKLSGSDGEDEPPPTKKKKQSAAVDAAYTPHPKKKRR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggccgacggggacgacgattccgacgacgagcttggctcgccttccaag
cgcgagattgcgaggagggagaaggagaggctcaaggagctcaaggagaagaagaagaaa
gaagtggacaagtttctcaagaagcaaaactccctcgttgatgcggacatggcaagtttc
cgttgccggctcaagtttctgttggagcagacggagatttttgctcactttgcacaggga
gccgagaaagccaaagcgaaaaaagctggcggcaagggtagacatgcgtcgaagatgaca
gaagaagaggaggacgctgagtatttgaaggaagaagaaattgctttgggtgatggagca
gggggttccggaggtacaaggcttgtcgcacaaccagcttgcattattggaaaaatgcgg
gactatcaacttgcgggtcttaactggttgataaggctttacgaaaacgggataaatgga
attctcgccgacgaaatggggcttggcaaaacgttgcagacgatatctcttctggcttac
ctccacgagtccagaggcatttcaggtccacatatggtggttgcaccgaaatcaactcta
ggcaactggatgaatgagatacggaggttctgtcccgtgctacgggctttcaaatttcat
ggaacacaagacgaaagggcacaacaaagggattatcagcttgttgctggcaagttcgat
gtttgtgtaacaagctttgaaatggcaataaaagaaagggcggccttaaagaaattcagt
tggcgctacatcatcatcgacgaagctcatcgcatcaagaatgaaaactctctgcttgcg
aaaaccatgcgtttattctccacaaactataggcttcttattactggaacaccgcttcag
aacaacctgcacgagctgtgggcgctcttgaattttctcctgcccgaaatctttagctct
gctgagacctttgacgagtggtttcagatttctggagaaaatgatcagcaggaggtcatt
cagcaacttcacaaggtcttacgcccatttctcttaagacgtctcaagtcggatgttgaa
agaggattacccccaaagaaggagacaatcctcaaagttgggatgtctcagatgcaaaga
aattactacaaggctttacttcagaaagacatcgacgctattaatacaggcggagagcgt
agacggttattaaacatagccatgcaattacgtaaatgttgcaaccatccatacctcttc
cagggtgccgaacctgggcctccgtatttcactggggagcatcttgtggaaaactctggc
aagatggtacttctagacaagcttctcccaaaactcaagcagcgaagttctcgcgtacta
atattttctcagatgacgcgtcttctagatattctagaagactactgtatctttcgagga
tatccatcttgccgaatcgatggtggaactagcggtgaggaccgggagtttgccattgag
gctttcaacagagaaggaagtgagaagtttatattcttgctttcgacccgagccggcggt
cttggtatcaatttggctactgccgatatcgttattctctatgacagtgactggaatcct
caagtcgatttgcaagcgcaagatcgagcacatcggattggacagaaaaaagaagttcaa
gttttccgattttgcacgcagtatactattgaagagaaagtcattgaacgcgcgtacaaa
aagcttgcactggatgctttggtgatccaacagggtcgactagctgaacagagagctgtc
aacaaagatgagctcttgcagatggtaagatttggcgcggagatggtatttagcgccaat
gacagcactatcacggaggaagatattgatcgcatcattgcaaaaggagaagaagccact
gctgaacttgatgccaagatgaagaaatttacggaggacgccatcaaatttaagatggac
gacactgccgaattttacgactttgatggcaacgatgacaaggaggaaggtaaagttgac
tttaaaaaactagttgccgataattggattgagccacctaagcgagaaaggaaacgcaac
tactctgaatccgattatttcaagcaagcaatgagaaccggtggatcgagcaaatctaaa
gagccacgaattcctcgaatgcctcaactacacgattttcaatttttcaacattcaccgg
ctgacagaactgtacgagaaagaagtcaagtttcgcttgaaaactcaaaaagaaggaaac
gccgagacagaagagattgaagatggagagcctctcacggcagaagagcaagaagaaaag
gagcaactgcttcaggagggattttgtacttggacacgtcgagatttcaatgcttttgta
agaggttgcgagaagtatgggagattcgactttgcaagcattgcaaatgaaatggaagga
aaaaccgaagaggaagtcgaacgatactgtagggtatttcaagaacgctacaaagagctc
aatgactacgacagaattttgcgagccattgaacgcggggaggctcgcatcgcaagaaaa
gatgaaatcatgagaactattgggaagaagctggaccgatacaaaaatccgtggcaagag
ctgaaaatccagtacggtcagaacaagggtaaactatacaatgaagaatgtgacaggttt
ttgatctgcatgacgaataaactcggatacggcaactgggacgagatcaaaaccgccatt
cgcatgtcacccattttcagattcgactggttcatcaagtcgagaaccccgggagagctc
gcaaggcggtgcgacacgctgatccgcttgatcgagagggagattcaggaactagacaga
catacaaggaaagaccagaagctcgtcaagaatgcgtctccagcaaggagatcatggcca
aagctctctggcagcgatggtgaagacgagccaccgccaacgaagaaaaagaagcaatcg
gcagcagtggatgctgcgtacacacctcatcctaagaagaaacgaaggtag
DBGET
integrated database retrieval system
