Selaginella moellendorffii: SELMODRAFT_164675
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Entry
SELMODRAFT_164675 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_164675
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_164675
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SELMODRAFT_164675
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SELMODRAFT_164675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
S1_RRP5
Tex_central_region
HHH_9
HTH_44
S1
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
9629682
NCBI-ProteinID:
XP_002961884
JGI:
164675
UniProt:
D8QTN8
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MADFIVDEDETDENGQLLRTKRPKKKKYSRQAPGISSSALQEAQEIFGDVSQLLEDRRIR
VSEAEREEGRLAKEFEPSVLEEKYMTENDDRIRETDIAERLQPMAEIILPLPQAEIAREA
EWVYERAFGKFALPDQRPELQHVVNTDKVEVIKQIANVIQLLHEVEVPFIGMYRKEMCKD
LIYEEQESIDADGDEARPTLRHYKVLWIVQYWDKKWLLLQRRKSALKDAYVKRAGDQNAE
FLSRILESLMDAPSEQCVDDIDAKFNLYCPPDEVEVEEGKFRRPKRRSFYSVCRKHGLGS
VTQFFGLSPDLFGDNLLNMYKKHEFDDATSTPDEIAATRLAGEFSDIQSVLRGARHMAAV
EISAEPAAREYIRNFYMDRAVVTTKPTVEGNRVIDPFHQYADVKWLLNKPVKAFEDGQWL
LIQKAEEEKLLEVSIGIPKDATATLFQEFEPLYLSDGVSITAQLWNEQRKQILRDAVSTF
LLPSMERETRVVLTGRAKQWVATNCADQLWKWISVAPYPRPGEQDDRDEEGARVLACCWG
PGKPATAFVMLDSAGEIIDTLHAGYLTVRTGSYEQQQRKKNDQQRLLQFMTEHQPHVVVL
GAANMSCRFLKDDIFEQVIFKIVEEHPRDLADGIDMIPLVYGDETIPRLYEYSRVSEEQL
QQQPGIVRRAVALGRYLQNPLAVVSSLCGPSREILSLKLHPLQNFLTPDELYEAVERVMV
TVTNQVGVDVNMAASHDWLFAPLQFVAGLGPRKAAYIKRAIQGAGRVSSRKEMLTSLELM
KRNVFINAAGFIRIRGSGQVPSGTLDPLEDTRIHPESYDLAKKMAEDAYCEEHGETADEE
ALELAVEHVRDHPRVLRNLVIEEYAKVVQERGVSGKKLETLMDIKRELQHGYQDWRVKYM
SPEPDEVFYMLSQESEETLCEGRIIQATVRKVQQNKVMVVLESGLIGFIRREDLSDDRDV
DPADKVAEGSILTCRIKEVHKAKFLLDLTSKGSDLRGDHWIPGRPRDRYYQVNPTFFQDE
EEKARKKVEEQKHKTFKARMIVHPQFRNISLLEATQSLADKEIGDGIIRPSSKGPSHLSM
TLKFYPNVFTHIEIVEGGKDVSSMTSLLRLGKTLKIGEDTFEDLDEVIARYVDPLVGHWR
EMFRYRKFKQGTKEEVDNILRAEKEANPARIPYYFSVCYEHPGVFTLSYLKSINVHHEYV
SVSPKGFRFRHRYLDTPDKLVAYFQKHINDPVPEAPPRRAAAAMVPSGDPRKAGSRGWTD
NRGGGSSRGGWDNSQGGGGGGGGYGRSGGGWDQDRRGGWDRDRDKGAAAAAAVPAGGDHW
SSWSKGGNWGAQQQQPQHHDNGWGQQQQQQQTDDGWGGSSGGGGGW
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggctgactttatcgttgatgaagacgagacagacgagaatggtcagcttctgagaact
aagaggcccaaaaagaagaagtattcccggcaagcaccaggaatatcatcaagtgccctt
caggaggctcaggaaatttttggtgatgtgtcgcaactgctggaggaccggcgcatacgt
gtttccgaagcagaaagagaagaaggaagacttgcgaaggaatttgagccgagtgttttg
gaagagaagtacatgacagaaaatgacgaccgaattcgtgaaacggacattgctgaaagg
cttcagcccatggctgaaattatcctcccacttccacaagcggagattgctagggaggca
gaatgggtttacgaacgggcatttggcaagtttgctcttcctgatcagaggccggagtta
caacatgttgtaaataccgacaaggtagaggtgatcaagcaaatagcaaacgtcatacag
ctgcttcatgaagtagaggtccctttcatagggatgtatcgtaaggagatgtgcaaagat
cttatctatgaggaacaagagtcaatagacgcagatggggacgaagcaagaccaactctt
cggcattataaagtgctttggatagtacagtattgggataagaaatggttgctacttcag
cgacgaaagtcggcccttaaagatgcttatgtaaagcgtgctggtgatcagaacgccgag
tttcttagtaggatactcgagtctcttatggacgcgccgtccgagcaatgtgttgacgac
atcgacgcaaagtttaatctctactgtccacccgatgaagttgaggtcgaggaagggaag
tttcgacggccaaaacgtcgttccttctacagtgtctgccgcaaacatggtctgggaagc
gttacccagtttttcggtttgagtccagacctgtttggagacaatcttctgaacatgtac
aagaaacacgagtttgatgatgctacttccacgcccgatgaaatcgctgctacccgtcta
gcaggagaattctccgatattcaatctgtgcttcgtggagcaaggcacatggcagccgtg
gagataagtgccgagcccgctgcacgtgaatatataaggaacttttacatggacagagct
gttgtgaccacaaagcccacggtcgagggaaatcgagttatagatcccttccatcaatat
gcggacgttaaatggcttctgaacaaaccagtaaaagcttttgaagatggacagtggttg
ttgatacaaaaggctgaagaggaaaaacttttggaggtcagcattgggataccgaaggat
gcaactgctacactctttcaagagtttgagccgttgtatctaagtgatggggtcagtata
acagctcagctgtggaatgagcagcggaaacagattctcagggatgcggtttcaacattt
ttacttccgtctatggaaagggagacgagggtggttttgacgggcagagctaaacagtgg
gtggctacgaactgcgcggatcagctttggaaatggatatctgttgctccatatccacgg
ccaggtgaacaagacgaccgagatgaagaaggcgcacgtgtattggcatgctgttgggga
ccgggaaagcctgctacggcttttgttatgctcgattcggctggtgaaataatcgacact
cttcatgccggttatttgactgtccgaactgggagctatgagcagcagcaaagaaagaaa
aatgatcagcaacgtctattgcagttcatgacggagcaccagccacatgtggtggttctt
ggagcagccaatatgagttgccgcttcctgaaggacgacatttttgagcaagtgattttt
aagattgtagaagagcatccgcgtgaccttgcggacggcatagatatgataccgctggtt
tatggtgacgagaccattcctcggctttacgagtattctcgcgtgtccgaagagcagctt
cagcagcagccaggaattgtgaggcgtgctgttgctctaggccgctatctccagaacccg
ctggcagtagtgtcatccttgtgtggcccttccagggagattttgtctttgaagctacat
cctcttcaaaactttctcactcctgacgagctgtatgaagcagtggagagggtgatggtg
acggtcacaaatcaagttggggtggacgtgaatatggctgcgtcacacgattggcttttc
gcaccgctgcagtttgtggctggtcttggaccaaggaaggccgcttacatcaaacgcgct
attcagggtgccgggcgggtgagctcacggaaggagatgcttacctcgctagagctgatg
aagcggaacgttttcatcaatgccgctggtttcatcaggatccggggctctggtcaagtt
ccttctgggacccttgatcctctggaggacacgagaatccatcctgagtcgtacgacctc
gccaagaagatggcagaagatgcttactgcgaagaacatggagagacagcagacgaagaa
gcacttgagctggctgtggagcatgttcgagaccatccccgggttttacggaacctggtt
atcgaggagtatgccaaagttgttcaagagaggggggtctctgggaagaagctggagacg
ctgatggatattaaacgtgaactccaacatggctaccaggactggcgtgtcaagtacatg
agccccgagcccgacgaagtcttctatatgctttcgcaagaaagcgaagagactttgtgt
gaagggagaatcatccaagcgaccgtgcggaaagtgcagcagaacaaggtgatggtggtt
ctggaatcggggctgataggatttatcaggagggaggacttgtcagatgaccgggacgtt
gatccggccgacaaggtggccgaaggtagtatactcacctgcaggatcaaagaggttcac
aaagccaagtttctattggatttaacgagcaagggaagtgatttaagaggagatcactgg
ataccggggcggccaagagatcgctactatcaggtgaacccgactttcttccaggatgaa
gaagagaaagcaaggaagaaagtcgaggaacagaagcacaagacatttaaggcccggatg
attgtccatccccagtttcgaaatatatcgctgctagaggccacgcagtcactggctgac
aaagagattggcgacgggatcattcgccccagtagcaaaggaccgtctcacttgtcaatg
acgctgaagttctatcctaatgtgttcactcacatagagatagttgaaggtggtaaggac
gtgagcagcatgacaagtctcctccgccttgggaaaacgctcaagatcggagaagatacg
tttgaagacctggacgaggttattgctcgctatgtcgatcctctggttggccactggcga
gaaatgtttcgctatcggaagtttaagcaggggacgaaggaggaagtagacaacatcttg
cgagctgagaaggaagcaaacccggctcgcataccatactacttctcggtgtgctacgag
cacccaggagtcttcactctgtcctacctcaagagcatcaacgtccaccacgagtatgtc
agcgtttctcccaaaggcttccggttcaggcacagatacttggacactccagacaagctg
gtggcatacttccagaagcacatcaatgatcccgtgcccgaggctcctccacggcgtgct
gccgctgctatggtaccgtctggcgaccccagaaaagctggcagcagaggctggacagac
aacagaggtggtggctcttcgagagggggatgggacaactctcaaggtggtggtggtggt
ggtggtggctatggaagaagcggcggtggatgggatcaagatagacgaggcggatgggat
cgcgatcgagataaaggagctgctgccgctgctgctgttcctgctggcggagatcactgg
tcatcctggtcgaagggtggtaactggggagctcaacaacaacagccacaacaccatgac
aatggatgggggcaacagcagcaacagcaacaaactgatgatggatggggggggagctcg
ggtggcggaggcggatggtag
DBGET
integrated database retrieval system