Selaginella moellendorffii: SELMODRAFT_166330
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Entry
SELMODRAFT_166330 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
smo
Selaginella moellendorffii
Pathway
smo03015
mRNA surveillance pathway
smo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SELMODRAFT_166330
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
SELMODRAFT_166330
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_166330
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_166330
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_166330
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
SELMODRAFT_166330
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
SELMODRAFT_166330
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
SELMODRAFT_166330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
PDS5
SCD
Adaptin_N
GNC1_N
TPR_TNPO3_IPO13_3rd
INTS7_N
Motif
Other DBs
NCBI-GeneID:
9643692
NCBI-ProteinID:
XP_002963887
JGI:
166330
UniProt:
D8QX59
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MAAMVEEPLYPIAVLIDELKNDDVQLRINSVRRLSTIARALGEDRTRRELIPFLADGSDD
DEEVLLAMAEELGNLVPYVGGVEYAHSLLPPLEALCDVEESAVREKAVASLCKIASVMNE
RDLVEWFAPVVKRLAAGEWFTARVSVCGLLHIVYPSAPELLRAELRTIYNQLSHDDMPLV
RRAAISNLGKFAATIEPAFLKTDIMAVFRDLTQDEQDSVRLLAVEGCAALGRLLQTSDCI
ACVLPLILNFSQDKSWRVRYMVANQLYELCETVGPECTRVDLVPAYVRLLRDNEAEVRIA
AADKVTKFCEIVQPEIAMQSILPCVKELSLDSSQHVRAALASVIMGMAPVLGKDATIEQL
LPIFLALLKDEFPDVRLNIISKLDQVNKVIGIDLLSQSLLPAIVELAEDKHWRVRLAIIE
YIPLLASQLGVEFFDDKLGALCMHWLGDQVCSIREAAANNLKRLTEEFGTEWACRHIIPQ
VLEMINNPHYLYRLTILYAISLFAPVVGSEVTCQMMLPVVINAAKDRIPNVKFNVAKILQ
SFIPIVGSEVVEQSIRPCLVELSEDPDVDVRYFANQALQSCEQAMSM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatggtggaggagccgctctatccgatcgcagtgctcatcgacgagctcaag
aacgacgacgtccagctccggatcaactcggtgcgccggctgtccaccatcgctagggct
ctgggcgaggatcggacgcggcgggagctgatccccttcctcgccgacggcagcgacgac
gatgaagaggttcttcttgccatggccgaggagctggggaatcttgtcccctacgttggg
ggcgtggagtacgcgcattctctgctacccccgctggaggcgctgtgcgatgtggaggag
agcgcggtgagggagaaggcggtggcgtcgctgtgcaagatcgccagtgtgatgaacgag
cgcgatcttgtggaatggtttgctccggttgtcaagaggctcgcggctggagaatggttc
acggctagagtgtcggtgtgtggactgctacacattgtctacccgagcgctccggagctt
ctccgagcggaattgagaaccatctacaaccaactaagtcacgacgatatgcctttggtg
agaagggccgccatctccaacctcgggaagtttgctgctaccatcgagcctgcgtttcta
aagaccgatatcatggctgtctttcgggaccttacacaggatgagcaggattcggtcagg
cttctagctgttgaaggctgtgctgcgcttggaaggttgctacaaacaagcgactgcatt
gcctgtgtgttgccgctcatactaaatttctcacaagacaagtcctggcgggtacgttat
atggttgctaatcaactatatgaactctgtgaaactgttggaccggaatgtactagggtt
gatctggtccctgcctatgtgcgacttctaagagataacgaagcggaagtcagaatagca
gcagccgacaaagtgaccaagttttgtgagatagtccagcccgagattgccatgcaaagc
attcttccatgtgtaaaggaactttctctagactcgtcacaacatgttcgtgcggctttg
gcttctgtaataatgggcatggcaccggttcttggaaaagacgcgacaatcgaacagctt
ttaccaatatttttggcccttttgaaggatgaattccctgacgttaggctcaacatcata
agcaagctggatcaagtcaacaaggttattggtattgacttgttatcgcaatcgctccta
cccgcgattgtggaactggctgaagacaaacactggcgggtgcggctggctattattgag
tacattccactccttgcgagccaactaggagtggaattctttgatgacaagcttggtgcc
ttgtgtatgcattggcttggagatcaggtgtgttctatcagggaagctgccgcaaacaac
ctgaagaggctgaccgaagagtttggcacagaatgggcttgcagacatattattccacag
gtgttggagatgattaacaatcctcactatttataccggctgacgatactgtatgccatt
tctttgttcgcccctgttgttggctccgaagtgacatgccagatgatgctaccagtcgtg
atcaacgctgcaaaagacaggattccaaacgtgaagttcaacgtggcgaagatcctacaa
tcgtttatcccgatcgttggcagcgaggttgttgagcagtcgattcgcccatgcttggtg
gagttgagcgaagatccggacgtggacgtgagatacttcgcgaaccaagcgctgcagagc
tgtgagcaagcaatgtcgatgtga
DBGET
integrated database retrieval system
