Selaginella moellendorffii: SELMODRAFT_167182
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Entry
SELMODRAFT_167182 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00061
Fatty acid biosynthesis
smo00071
Fatty acid degradation
smo01100
Metabolic pathways
smo01212
Fatty acid metabolism
smo04146
Peroxisome
Module
smo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SELMODRAFT_167182
00071 Fatty acid degradation
SELMODRAFT_167182
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SELMODRAFT_167182
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smo01004
]
SELMODRAFT_167182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_167182
Enzymes [BR:
smo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SELMODRAFT_167182
Lipid biosynthesis proteins [BR:
smo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SELMODRAFT_167182
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of breast milk
SELMODRAFT_167182
Exosomal proteins of breast cancer cells
SELMODRAFT_167182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9658782
NCBI-ProteinID:
XP_002965142
JGI:
167182
UniProt:
D8R1Z9
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MDSAQRRLKIIHGHIASLATGQSQLLDFHPTAGEFFIEQGYSVILPEKLKNGKWNVYRSI
RSPLKLVDHFPNHPEILTLHDNFVYAVRSYGDSKYLGTRVREDGTVGEYRWVTYGEAGAA
RTAIGSSLVSRGIPKGSGIGLYMINRAEWIVIEHACSSYSYVSVPLYDTLGADAVTFIIN
HAELSAVFCTADKLNTLLSCLSDLPSVRLVVVIGGSEHLLPSLPQTSGVEIVSYSKFEAQ
GRIDERPFIPPMPDDIATICYTSGTTGTPKGAMLSHHNLVASCSGACLTIKLYPSDVHIS
YLPLAHIYERTNIIAMAHYGASLGFYQGDILKLMDDLELLRPTVFASVPRLYNRIYDRIV
TTVQSSGGLREKLFNVAFNAKRQALEKDKTPSPIWDRLVFNKIKARLGGRVRLILSGASP
ISPEVLDFLRICFGACVLEGYGMTETACLISSCQEGDNTSGHVGAPNSSCEIKLEDVTEM
EYTSQDKPYPRGEICVRGPSIFKGYYKDEVQTKEVLDPEGWLHTGDIGLWLPDGKLRIID
RKKNIFKLAQGEYIAPEKIENVYHKSKFVAQCFVYGDSLNASAVAIVVVDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggattcagctcagcgccggctcaagatcatccacgggcatattgccagtctcgcgaca
gggcaatcgcagctgctcgattttcatccaacagctggagaatttttcattgagcaaggc
tatagtgttattcttcccgaaaagcttaaaaatgggaagtggaatgtgtataggtccatt
cgatctcctctgaagctcgtggatcacttcccaaatcatccggaaattctcacactgcac
gacaactttgtgtacgccgttcgctcctatggtgactccaagtatcttgggacaagagtt
cgcgaagatgggactgttggagagtacagatgggttacttatggagaagctggtgccgcg
cgaacggctattggatcgagtcttgtttctcgtgggatcccaaagggatcgggtatcgga
ctctacatgattaatcgcgctgaatggatagttattgagcacgcctgttcgtcatattcc
tacgtctctgttccgttatatgacacacttggtgctgatgcggtcacatttatcatcaat
cacgctgagctttcagctgtcttttgtactgcagataaattaaatacgcttctcagctgt
ctttcagaccttccatctgtgcggcttgttgtggtcattggaggttcggaacatttactt
ccttcactcccacaaacgtctggagtagagattgtatcctattcaaaatttgaagcacag
ggtcgaatcgatgaaaggccatttattccgcctatgcctgacgatattgcaacgatatgc
tatactagcgggacaacgggcacaccaaagggagcgatgcttagccaccataaccttgtg
gccagctgttcaggtgcctgtttgacgatcaagttgtacccttcagatgtacatatttct
tatttacctttagcacatatttacgagaggacgaacataatagctatggcacattatgga
gcctctttaggattttatcaaggggacattttaaagctcatggatgatttagagttgctg
aggcctactgtttttgctagtgttccccgtctctacaacagaatttatgacagaattgta
accacagttcaatcatctggtgggctgcgggagaaacttttcaatgtggccttcaacgca
aagcggcaggctcttgagaaagataagactccttctcctatttgggaccgtcttgttttt
aacaagatcaaggcaaggcttggaggccgggtaaggctcatattatctggtgcctctcct
atttctccagaggttttggacttcttaagaatatgctttggtgcgtgcgtactcgaaggc
tatgggatgacagaaacggcgtgcctcatttcttcttgtcaagaaggagacaacacgtca
ggccatgtcggagctcccaactcgtcttgtgaaatcaagcttgaagatgtcaccgagatg
gaatatacaagccaggacaagccatatccccggggagaaatatgtgtcaggggaccaagt
atatttaagggctattacaaagacgaagttcaaacgaaagaagttctcgatcctgagggc
tggttgcacacaggtgatattggtctctggctacctgacgggaagctgagaattattgac
cggaaaaagaacatttttaagcttgcacagggtgaatacatagcgccagagaagattgag
aatgtctatcataaaagcaagttcgttgctcagtgtttcgtctacggcgatagtctaaac
gcgagtgcggtagcaatcgtggtggtggatccg
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