Selaginella moellendorffii: SELMODRAFT_167991
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Entry
SELMODRAFT_167991 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
smo
Selaginella moellendorffii
Pathway
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_167991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_167991
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
SELMODRAFT_167991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
AEP1
Cbl_N
NEMO
Motif
Other DBs
NCBI-GeneID:
9652179
NCBI-ProteinID:
XP_002965716
JGI:
167991
UniProt:
D8R4P2
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MAAADAVTAAEEQDKWLADAMALVQHNAFFMHRALDNNNLRDALKYSAQMLSELRTSKLS
PQKYYELYMKSFDELRKLEFFFKDETKRGRTNADLYELVQHAGNILPRLYLLITVGSVYI
NSKEAPAKDVLKDLVEMSRGVQHPIRGLFLRSYLAQVSRDKLPDVGSEYEGEGGSVNDAV
EFVLQNFTEMNKLWVRMQHQGPAREKEKREKERRQLRDLVGKNLHVLSQLEGVDLAMYRD
VVLPRVLEQVVNCKDEIAQYYLMDCIIQVFPDEFHLQTLESLLGACPQLQTTVDVKTVMA
QLMDRLSNYVASTPDVLPEILQVEAFGKLSTATMKVIDAQPDMPLVGAVSLFVALLTFTL
RVHADRLDYVDQVLGACFKKLEGRGKVKDSKATKQIVALLSAPLEKYNDVVTVLKLTNYP
RVMDHLDYETNKSMAVTIIQFIMKNNTLISSVDKVEALFELLKELIKDSEGNPALDEAKD
FQEEQNLVAKLVHLLKNDDDTEMFKILEAATKHFTEGGSKRLSLTLPSLVFSALKFVRQL
QFRNATDESPVSPKKVFQYLHQTIESLSTVPAPELALRLYLQCAEAASDCDLEPVAYEFF
TQAFMLYEEEIADSKAQITAMHLIIGTLQRTTVFGVENRDTLTHKATGYSAKLLRKPDQC
RAVYACSHLFWNDDGGTQDGERVLLCLKRALRIANAAQQVSSASRGSSGPVTLFVEILNK
YLYYFEKGVPAVASSLVQGLLELIMTETQSEKTSKDAAVDAFFASTMRYIQSQKQKSDAS
GERYGTIQI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggacgctgtcactgcagctgaagagcaggacaaatggctcgcggatgcc
atggctctggtccagcacaatgccttcttcatgcatcgggcgctggataacaacaacttg
agagatgctttgaagtactctgcgcaaatgctatcggagcttcgcacctccaaattgtct
ccacagaagtactacgagctgtatatgaagagttttgacgagcttcggaagctcgagttc
ttcttcaaggacgagacgaaaagaggccgcacgaatgccgatctctacgagcttgttcag
cacgctggcaacatcttaccgaggctgtacctgcttattacagtaggctcggtgtacata
aattccaaggaagctcccgcaaaggacgtcctgaaggatttggttgaaatgagccgtggt
gtccagcatcccattcgtggtttgttcctgagaagctacttggctcaagtcagtcgcgac
aagctaccagacgttggctccgaatacgaaggggaaggaggtagtgtcaatgatgccgtg
gagtttgtgcttcagaatttcacggaaatgaataagctctgggtccggatgcaacaccag
ggacccgctcgggagaaggaaaagcgagaaaaggagaggagacagctgcgagatttggtt
gggaaaaatcttcacgttctaagtcagcttgaaggtgtagatcttgcaatgtacagggat
gtggtcctcccaagagtgctcgaacaggttgttaattgcaaagacgaaatcgcacagtac
tatttgatggactgtatcatccaagtgttccccgatgagtttcacctgcaaactttagaa
tctcttctaggagcatgcccccagctacagaccactgttgatgtcaagacggtaatggca
caacttatggacaggctttcgaactatgtcgcctctacaccagatgtcctaccggagatt
ttacaagtagaagcttttggcaaactcagcactgctaccatgaaggttatagatgctcaa
cctgacatgccgcttgtaggtgctgttagtctttttgtggctttgttaacctttactttg
agagtacacgctgatcgtctggactatgtcgaccaagttttgggtgcctgctttaagaag
cttgaaggaagggggaaggttaaagacagcaaggctactaaacagattgtggccttgttg
agtgcacctctagagaagtacaatgacgttgtcactgtgttgaagcttacgaattatcca
cgggttatggaccacctggattatgaaacgaacaagagtatggcagtgactattatccag
ttcattatgaaaaacaacacgcttatatcgagtgttgataaggtggaggcactttttgag
cttttaaaagaacttatcaaagacagtgaagggaatcccgcgttagacgaggcaaaagac
tttcaagaggagcaaaaccttgttgctaaactagtacatcttctaaagaacgatgatgac
acagaaatgtttaagattctggaagcagctacaaaacactttacagaaggaggttcaaag
cgtctctccttgactctaccttcactcgtattctcggcattgaagtttgtgcgacaatta
caattccgaaatgcaacggacgaaagcccggtttctccaaagaaagttttccaatatctg
catcagacgattgaatcgctatcaacagtgcctgctccggagctggcattacgtttatat
cttcagtgcgcggaggctgccagtgactgtgacttggagcctgttgcctatgagttcttt
acgcaagcgtttatgctttacgaagaagagatcgctgactctaaagcacaaatcacggca
atgcacctgatcatcgggacattgcagagaactactgtctttggggtagaaaacagagac
acgctcactcacaaagctacagggtactcggcgaaattgctaagaaaaccggatcaatgt
cgtgccgtgtatgcttgctcgcatttgttctggaacgacgacggtgggactcaagacggg
gagagggtgctactgtgcttaaagcgagctctcagaatcgccaatgctgctcagcaagtg
tccagtgcaagcaggggaagcagcggaccagtcactctcttcgttgagatactgaacaag
tacctctactacttcgagaaaggcgtcccggctgtagcgagcagccttgtccagggactc
ctggagctgatcatgacggagactcaaagcgagaaaacatccaaagacgcggctgtggat
gctttcttcgcaagcacgatgaggtacatacagtcccagaaacaaaagagcgatgcgtct
ggagagcggtatggtaccattcagatatag
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