Selaginella moellendorffii: SELMODRAFT_168492
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Entry
SELMODRAFT_168492 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
smo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_168492
03460 Fanconi anemia pathway
SELMODRAFT_168492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_168492
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_168492
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SELMODRAFT_168492
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Topoisomerases
SELMODRAFT_168492
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
SELMODRAFT_168492
FA (Fanconi anemia) pathway
SELMODRAFT_168492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
9652616
NCBI-ProteinID:
XP_002966408
JGI:
168492
UniProt:
D8R567
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MLASFLSSGRMSTRKSYLDVHEFDGTFRGFQAHYKVTSVIGHVYGIDFPPKYQNWELTDP
LDLFGAPTLKNEANPKAHVCKHLRQEARGCDSLVLWLDCDREGENICFEVMENALPVMKK
RSGQQVFRARFSAVSEKDVKTAMSSLVEPNQNEALAVDARQEIDLKVGVAFTRFQTRFFQ
GKYGNLDSSVISFGPCQTPTLGFCVERHTQIITFVPKPFWTLHPRLSKGGHSLQLDWERG
RVFEQATALVPQKAVLKSGSLKVLDVSQKEERKARPTGLNTVNMLKVASTALGMGPHHAM
QIAERLYVQGYISYPRTESTAYPASFDVKESLLPLGNHPVFGDYARSLIAAGVRAPKSGT
DAGDHPPITPMRSGTESELGGDAWRLYDYISRHFLGSVSPDCKYKRTKVTFSGGGEVFTC
SGKVVTSPGFTIAMPWMAVTDENLPAFTIGESLPCSEVELYQGRTSPPDYLTESDLISLM
EKHGIGTDASIPVHINNICQRNYVQVQTGRRLVPTALGITLIRGYQTIDADLCLPDIRSF
IEQQITLIAKGQVDHETVVRNSLDKFVAKFKNFIEKMDALFEAHFSPLADSGRPLSKCGK
CKRYMKYITLRPSRLYCSTCEEVYPVPQNGSIKLYKELACPLDNFELVLFSLGGPDGKSY
PLCPYCYNHPLESPARDPSSEATTSSDDQASGTAPGDGNPNTRRGRAATGAGMPCTMCPH
ATCRHSVMQQGVCACPECDGTLILDPISAPKWRLDCNKCSFLVYLPANTHKVSRSEHDYC
DDCGSALLEVDFHKNNTPLEGGRTLHTACVVCDELLQSLVVMKHGKSFGRSRGRGRGRGR
GRGRGRGRGRGGGRGGGRGKHQDPRMSFRDF
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctggcttcgtttctctcttctggtcgtatgagcactaggaaatcctacttggatgtt
cacgagtttgatggaacgtttagaggtttccaagcgcactacaaggttacttctgtcatt
ggtcatgtctatggcattgattttcctccaaagtatcagaactgggagctgacggatcca
ttggatcttttcggagctcctacgttgaaaaacgaagcaaatcccaaggctcacgtttgc
aagcatctcaggcaagaagctcgcggctgcgactcccttgtcttgtggctcgactgcgac
cgagaaggagaaaacatctgctttgaagttatggagaatgctttgcctgtcatgaagaaa
cgatccggacagcaagtgttcagagctcgcttctccgctgtgagcgagaaggatgtaaag
actgccatgagcagcctggttgagccaaaccaaaacgaggcgcttgcggtagatgctcgg
caggagatcgatttaaaagttggagtggcattcactcgcttccagactcgtttctttcaa
ggaaaatacggcaacctggactcgagcgtcatctcttttggaccttgccagactccaact
cttggtttttgcgtggagcggcacactcagatcatcactttcgttccgaagccattctgg
actttgcatccgcgcttgagcaaaggtggacactcgctgcaactggactgggagcgcggg
agagtcttcgaacaggcaacagctctagtccctcagaaagcggtgctcaaaagcggttct
ctgaaagtcctcgatgtttcacaaaaagaggagcgaaaggctcgtccaacaggacttaac
actgtcaacatgctcaaggttgcttcgacagctcttggcatgggtcctcaccacgccatg
caaattgcggagcgtctctacgtccaaggatacataagctatccccggaccgagagcaca
gcctacccggcgagttttgacgtaaaggagtcactgcttccactgggaaaccatcccgtc
tttggagactacgctcgatcgttgatagctgctggcgttcgagccccaaagtccggcacc
gacgctggcgaccatcctccaatcactccaatgcgttccgggaccgagtccgagcttgga
ggagatgcctggaggctctacgattacatctccaggcattttcttgggagtgtgagcccg
gactgcaagtataagcggacgaaagttaccttctccggtggaggcgaggttttcacttgc
tcggggaaagttgtgacatcgccgggattcacaatagctatgccgtggatggctgtcacg
gacgaaaatcttcctgcgtttactattggcgagagtcttccttgctcagaggttgagctc
taccagggaagaacctctcctcctgattacttgactgagagcgacctgatatctctgatg
gagaagcatgggattggtacggacgcgtccattccagtgcatatcaacaacatatgccag
agaaactacgtacaggtacaaactggaaggcgccttgtgcctactgctctcggtataaca
ctcattcgaggctatcaaaccatcgacgcggatttatgcctcccggacatccggagcttc
atagagcagcaaatcacgctgattgccaaaggtcaggtggatcacgaaaccgtggtgcgc
aactcgctggacaagttcgtcgccaagttcaagaacttcatcgagaagatggacgctctg
ttcgaggctcacttctctcctctcgcggactccggacggcccttgagcaagtgtgggaaa
tgcaagcgctacatgaaatacatcacgctgcggccatctcgtctctactgctcaacctgc
gaggaagtatacccggtcccgcaaaatggttccatcaagctctacaaggagctagcttgt
ccacttgacaacttcgagctcgtcttgttctccctcggaggacccgacgggaaatcctat
cccctctgtccctactgctacaatcaccctctggaatctccagcaagagacccgagcagc
gaggccacaacctccagcgatgatcaagccagtggcactgctcctggcgatggaaatcca
aacacaagacggggacgagcagccacaggggcggggatgccatgcacgatgtgtcctcac
gcgacgtgccgccactcggtgatgcagcagggagtgtgcgcttgccccgagtgcgatgga
acgctcatcctggatcccatcagcgcgccaaagtggaggctcgactgcaacaagtgtagc
ttcctcgtctacctccccgccaacacgcacaaggtgtcgaggagcgagcacgattactgc
gacgactgtggctcggcgctcctggaggtggacttccacaagaacaacacgccgctggag
ggcgggaggacgctccacacggcgtgcgtggtctgcgacgagctcttgcagtctctggtg
gtgatgaagcacggcaagagctttgggcgatcgcgagggagggggagagggagggggagg
gggagaggacgagggagagggcgagggaggggtggagggagaggtggcgggcgaggaaag
caccaagatccccggatgagtttcagggatttctag
DBGET
integrated database retrieval system
