Selaginella moellendorffii: SELMODRAFT_169182
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Entry
SELMODRAFT_169182 CDS
T01496
Symbol
PGP4A-1
Name
(RefSeq) ATP-binding cassette transporter
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SELMODRAFT_169182 (PGP4A-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smo02000
]
SELMODRAFT_169182 (PGP4A-1)
04147 Exosome [BR:
smo04147
]
SELMODRAFT_169182 (PGP4A-1)
04090 CD molecules [BR:
smo04090
]
SELMODRAFT_169182 (PGP4A-1)
Enzymes [BR:
smo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SELMODRAFT_169182 (PGP4A-1)
Transporters [BR:
smo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SELMODRAFT_169182 (PGP4A-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_169182 (PGP4A-1)
CD molecules [BR:
smo04090
]
Proteins
SELMODRAFT_169182 (PGP4A-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_30
Zeta_toxin
AAA_5
AAA_21
APS_kinase
AAA_15
DLIC
AAA_25
AAA_7
DUF815
Motif
Other DBs
NCBI-GeneID:
9632613
NCBI-ProteinID:
XP_002967803
JGI:
169182
UniProt:
D8R9G1
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MPGPRSPNFSAAAKPDVALQMVETPKSKQAEVEVAEDAKKGRTHEVCSVPFYKLFYFADP
LDYLLMFLGTLGAMANGFAMPALTIVFGQLANAFGQNSGNIHAMVHEVALRFVYLGGAAS
VASFGEVAFWICTGERQAARIRGLYLKSILRQDVAFFDKETTTGEVVGRMSGDTILIQEA
IGEKVGKFIQLTATFLGGFAVAFTRGWKLTLVMLSALPLIVAAGGMMAVVVSRMSSRGQV
AYAEAGGIVDRVIGAIRTVASFTGEKRAVEDYDKALKRAYSAGVQQGIAAGLSLGFLLLI
VFSSYALALWYGSKLVLHEGFSGGRVMNVIFAVLTGGMALGQTSPCLNAFASGQAAAYKM
FEVIHRTPEIDAFQSSGKVPENVKGDIEFRQVDFSYPSRPDVQIFSKFSLGIPSGMTTAL
VGESGSGKSTVISLIERFYDPQAGEILLDGTNLNEIQLKWLRHQIGLVSQEPVLFGTSIK
ENIGYGKEGATLDEIQNAAYLANAARFINKLPQAYDTQVGEHGAQLSGGQKQRVAIARAI
LKNPRILLLDEATSALDAESERLVQEALDRVMTDRTTVVIAHRLTTIRNAHCIAVVQHGA
IVETGTHFDLVQRPNGAYSQLVHLQEMHQPPPVETTEIDPDSVLIQEDNRSLSRAASRNS
PSRWSFSKASPIRWSFSRSSSRGDGRHSFSLTKSASVKQADDSDQKQPVCEDIETGRTKP
KNISIFRLATLNKPEVPIVFVGSLAAAANGVILPLFGLLLSSIIGSFFEVNVHTLRRDVN
FWSMMFLVLACSAFVVAPAQILCFSVVGNRLIRRIRTQMFEKILRQEISWFDASENSSGA
LGARLSSDAAHVRSMVGDTLSLFVQNVATVAAGLVLAFTASWQLALLVLALVPLIGLQHL
MQVKFVQGFSADAKIMYEEASQVASEAVSSIRTVASYCAEVKVMDLYKEKCSLPLINGVK
QGIISGVALSVSNFVLFGSYAMSFWFGSRLVEKGETDFKRVFRVFFAITMSSVGISQSAG
MAPDIAKVKTAVNSVFSLLDRKSKVDPFDKSGKTLKLIKGDIEFRTVCFKYPSRPDVAIF
QDLSLLIPAGKTVALVGESGSGKSTLISLVERFYEPDSGQVLLDGIDIRKFQVKWLRQQM
GLVSQEPVLFDGTIRWNIAYGKEGAVSDEEIQAAAEASNAHKFISGLPEGYKTRVGERGV
QLSGGQKQRVAIARAIVKNPRILLLDEATSALDAESEHLVQEALDRIKVKRTSIVIAHRL
ATIVNADVIAVVKNGAIVERGKHADLIGIKGGAYASLAKLHLTAAPSTS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtcccagatctccaaatttctccgcggctgccaagcccgatgtggctctacag
atggtggagactcccaaatccaagcaagccgaggtggaggtcgccgaggacgcgaagaaa
ggaagaacccacgaggtttgctcggttcccttctacaagctcttctactttgcggatcca
ctcgactacttgctcatgttcttggggaccttgggcgcaatggccaatgggtttgcgatg
cccgccttgacaatcgtgtttgggcagctcgcgaacgcgtttggacagaattccggtaac
atccacgccatggttcatgaagtggctttgcgctttgtctatctcggcggcgctgcttcg
gtggcatcttttggtgaagtagcgttttggatttgcacaggagagcgtcaggctgcgagg
ataagaggactgtatctcaagtccatcttaaggcaggatgtggctttttttgacaaagaa
accacaactggagaagttgttggtaggatgtctggagacactattctgatccaggaagcg
attggagagaaggtcgggaagtttattcagctgacggctacatttttgggtggctttgcc
gtggcatttacgagaggatggaagctgactctggtcatgctctcggcgttgcccctgatc
gttgcagctggaggaatgatggccgttgtggtttctcggatgtctagcagagggcaagtg
gcatatgcagaagctggaggcatcgtcgatagagttatcggtgcaattcgaactgtagca
tcgtttactggagagaagagagctgtcgaagactacgataaagcgttaaagagagcgtac
agtgctggggtgcaacagggtatcgcagctggcctgagcctggggtttcttctgctgata
gtcttttcgagctacgcgctggctctttggtacggctcaaaactggttctacatgaaggc
ttttctggtggaagagtgatgaacgtgatttttgcggttcttaccggtggcatggcattg
ggtcaaacttctccgtgtctgaatgcgtttgcttctggccaagcagcggcatataagatg
ttcgaagttatccaccgtactccggagatcgatgctttccaatcctcgggcaaagttccg
gaaaatgtcaagggggatatcgaattccgtcaggttgatttttcgtatccatctcggcca
gacgttcagatattctcgaagttctccttgggtattccgtcgggcatgacaacggccctc
gtaggagaaagtggaagtggcaagtctacagttataagcttgattgaaaggttttacgac
ccacaggcgggtgaaatactgctggatggaacgaatctaaacgagatacagctgaagtgg
ctaaggcatcagattggtctcgtcagtcaagagccagttcttttcggcacgtcgatcaaa
gagaacattggttatggaaaagaaggagcaacactagatgagatccagaatgccgcgtac
cttgcgaatgcagccaggtttattaacaagttgccacaggcttatgacactcaggtcggg
gagcacggagcacaactatcaggtggacagaagcagagagttgcaattgcgagggcaatt
cttaaaaatcctcggattttactgctggatgaagccacgagcgccttggatgccgagtct
gagcgtctcgtgcaagaagctttggatcgtgtaatgacggacaggacgactgtagttata
gcccataggctgaccacgataaggaatgctcattgcattgctgtcgtgcaacacggagca
atcgttgagacgggtacgcactttgaccttgtacaacgtcccaatggtgcctactcccaa
ctcgtgcatctgcaagagatgcatcaacctccgcccgtagagaccactgaaattgatccg
gacagtgttttgattcaagaagataatcgaagtctcagccgagctgccagccgaaactct
ccaagcaggtggtctttcagcaaagcttctccaatccggtggtcatttagcaggtcttcg
agtcgaggggacggccggcactcgttctcattgacaaagtcagcaagtgttaaacaggct
gatgacagcgatcagaagcagccggtttgcgaggatattgagactggacgtacgaagccg
aagaatatatccatcttcaggcttgctactctgaacaagccggaagttccgatcgtcttt
gtggggtctctggctgctgctgcaaacggagttatcttacccctgttcgggcttcttttg
tcaagcatcatcggctcctttttcgaagtcaacgtacacacgctgcggagggacgtgaac
ttctggtcgatgatgttcctcgtccttgcgtgctccgctttcgttgtcgctccggctcag
atactttgcttctccgtcgtcggcaacagactaatccgtcgcatcagaacgcaaatgttc
gaaaaaatcctccggcaagagatctcgtggttcgacgcatctgaaaactccagtggagcg
ctcggggcaagactgtcctccgacgcagcacatgttcgaagtatggtcggagatacgttg
tctctgttcgtgcagaacgtagccactgttgctgctggtcttgttctcgcatttactgct
agctggcagctggctcttctggttctagctctggtgcccctgattggtctacagcatctt
atgcaagtcaagtttgtgcaaggcttcagcgcagatgccaagataatgtacgaagaggct
agtcaagtagccagcgaagccgtgagcagcatcagaacagttgcttcttactgcgcagaa
gtgaaagtcatggacttgtacaaggaaaagtgtagcctccctttgatcaacggtgtgaag
caggggattatcagtggagttgctctatccgtttccaactttgtgcttttcggatcatat
gccatgagcttttggtttggttcgcgcctcgtggagaaaggagaaaccgacttcaagaga
gtgtttcgggtgttcttcgccatcacaatgagctccgtcggaatatctcagtccgccggc
atggctccagacatcgccaaggttaaaaccgccgtcaactccgtcttttctctcctggac
cgcaagtccaaagtagatccgtttgacaagtcaggaaagacactgaaactaatcaaaggt
gacatagagttccgcaccgtctgcttcaagtatccatcccggccggacgtggccattttc
caggacctgtcgctactcattcccgctggaaagactgtagcactggtgggagagagcggt
agcgggaagtcgacactgatatccttagtggagcgcttctacgagccggactcgggccaa
gttctcctggatgggatagacataaggaagttccaggtgaagtggctgaggcagcaaatg
ggcctggtgagccaggagccggtcctcttcgacggcaccatccggtggaacatcgcctac
ggcaaggaaggcgcggtgagcgacgaggagatccaggctgccgccgaggcgtccaacgct
cacaagttcatctcggggctcccggagggatacaagacgagagtcggggagagaggcgtc
cagctctcgggtggccagaagcagcgagtagcgatcgcccgcgcgatcgtcaagaacccg
agaatactgctgctggacgaggcgacgagtgcgctggacgcggagtcggagcacctggtc
caggaggcactggacaggatcaaagtgaagcggacgagcattgtcatcgcgcaccggctg
gcgacgattgtgaacgcggacgtgatcgcggtggtgaagaacggggcgattgtggagagg
gggaagcatgccgatctgattggcatcaaaggtggcgcttatgcttctcttgccaagctg
catttgacggccgcgccctccacgtcgtag
DBGET
integrated database retrieval system
