Selaginella moellendorffii: SELMODRAFT_169615
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Entry
SELMODRAFT_169615 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_169615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_169615
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SELMODRAFT_169615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
9631139
NCBI-ProteinID:
XP_002968052
JGI:
169615
UniProt:
D8R9F1
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MEKERRDRRHRVEEDDRWHHDEKRERRHHRDVDREEDDHRRRHKSSSSRYDKQEDDRRHH
KSKEERHDRGHKSSKEEKEKTRSEKRGREQDDDLKKRSRDQEDGSKVEKRSRDQEDESRK
DAKRKRDLEKETADKSVSKRSRSEFAEEEKASNVEMNGQTPAQPVVALTPASTPTPAPFS
SPAPVPVPAPVPAPAAAPAAVPQTAPVAQEPSPAPEPEVAPVAGDASAIAKAKARMRQLR
KELNEKLKKLPLVSEVEQLANENDSANTITPDSVVPSGTVDVVANAANIASYKRAQECVA
RLGFQQPPGSMALHVPGVPSAGPKVVKHPVLRLDKQGREIDEHGVVVDNRKSNISTLKVN
INKQKKDAFQILHPELEEDPINNPHFDADMGMDRTKLVRQRRNSFQFVEEGRWTKKAEIF
RLNNRFGAAKAREIRSKQAALAKAKAEGDINPNLIEVTERIFKDDKQHQDPIPHVEWWDF
AVLPPQTQSYDEVIDGADVKFKKEKINIYVEHPVPIEPPAEPAPPPPQPLKLTKKEQKKM
RTQRRLAREKERQELIRQGKIEPPKAKVKMSNLMSVLGAEATQDPTRMEHEIRTAAAERE
RAHTDRNLARKLTPAERREKKEKRLFDDQGTLETIVAVFRVSDISHPQTRFKVDINAQEN
RLTGCAIITDGMTVVIVEGGAKSIKRYTKLMLRRINWSAKEEGSGGNEQGDEEDGNEEKE
NKCVQVWQGSVARPAFDRFFFQKFHTAGAARKYLSDAGVGHYWDSALHYKEE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaggagggataggcgccatagggtggaggaggacgatcgctggcaccat
gacgagaagcgcgagcggcgtcaccacagggacgtggatcgggaggaggatgatcatcgc
cggcgccacaaatcttcttcttcgaggtatgacaagcaggaggatgataggcggcatcac
aaatccaaggaggagaggcacgaccgaggtcacaagtcttccaaggaggagaaggagaaa
acgaggtcggagaagcgcggcagggagcaagatgatgatttgaagaagcgtagcagggat
caggaagatggatctaaggtggagaagcggagcagggatcaggaggatgaatcaaggaag
gacgcgaagcgcaagcgcgatttggagaaggagacggccgataagtcggtgagtaagcgg
agtcgtagcgaatttgctgaagaagagaaagcttccaatgtagagatgaatggacaaaca
ccagcacaaccagtggtggccttaactccggcctcaactccaacaccggctccattttca
tctccagctcctgttcctgttcctgcccctgttccagctccagcagcagctccagcggct
gttccacagactgcccctgttgctcaagaaccgtctccagcaccggaaccagaggtggca
ccagttgctggtgatgcatcggccatagcgaaggccaaggcgagaatgcggcagcttcgc
aaggagctcaacgagaagctgaaaaagttgccactggtaagtgaagtggaacagctggca
aacgaaaatgatagcgcgaacactataaccccagattctgtggtgccttccggaacagtg
gacgttgttgctaatgccgcaaacatagcgagttacaagcgtgctcaggaatgcgtagct
cgcctcggcttccagcagccgcctggttccatggcacttcacgtaccgggtgttccatcg
gctgggccaaaagttgtaaagcaccccgttcttcgcttggacaagcaaggaagagagatt
gacgagcacggtgtcgttgtggataaccggaagtcaaacatcagcacactcaaggtgaac
atcaacaagcaaaagaaggatgctttccagattttacatccagaattggaggaggatcca
ataaataatcctcattttgatgctgacatgggaatggacagaacaaagcttgtacgtcaa
aggagaaactcctttcagttcgtggaagagggaagatggacgaaaaaggcggaaatcttt
cgacttaataatcgttttggggctgctaaagcccgcgagataaggtcgaagcaggcggcc
cttgcaaaggccaaagcagaaggggacattaacccaaatcttatagaagttacggagagg
atattcaaggatgacaaacagcaccaagacccgattcctcatgtggagtggtgggatttc
gctgttctacctcctcagacacagagttacgacgaggtgatcgacggagctgacgtgaag
ttcaagaaagagaagatcaatatctacgttgagcaccccgtaccgatcgaacccccagca
gagccagcgcctccaccaccacagccactcaagctaacgaaaaaggagcagaagaaaatg
cggacccagcgtcgtctagccagggaaaaagaaaggcaagagctgatcaggcagggaaag
atcgaacctccaaaagcaaaggtgaagatgtccaacctcatgagcgtgctgggagccgag
gcaacccaggacccgacgaggatggaacacgagatcaggactgccgcggccgagagagag
cgcgctcacacggacagaaacctcgccaggaagctcactccagccgagagacgcgagaag
aaggaaaagaggctctttgacgaccaggggacgctggaaaccatagtcgcggtgttccgg
gtgagcgacatctcccacccccagactcggtttaaggtggacatcaacgcccaggagaac
aggctcacaggttgcgcgatcatcaccgacggcatgacggtggtgatcgtcgagggtggc
gcaaagtcgatcaagcgatacaccaagctgatgctccggaggatcaactggtcggcgaag
gaagaaggcagcggtggaaacgagcagggggacgaggaggatggaaacgaggagaaggag
aacaagtgcgtccaggtgtggcagggaagcgtagctcggccagcgtttgacaggttcttc
ttccaaaagttccacactgccggggccgcgaggaagtacttgtccgacgctggagttggg
cattactgggacagcgcgctgcattacaaggaggagtag
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