Selaginella moellendorffii: SELMODRAFT_170519
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Entry
SELMODRAFT_170519 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_170519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_170519
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
Pre-60S particles
GTPases
SELMODRAFT_170519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
9660089
NCBI-ProteinID:
XP_002969201
JGI:
170519
UniProt:
D8RDP7
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MEREAARTRNICILAHVDHGKTTLADHLIAGAGGGVLHPKQAGKLRYLDYRDDEQQRAIT
MKSASIALRFQGHSVNLIDSPGHIDFCSEVSTAVRLSDGALVLVDVCEGVHIQTHAVLRQ
AWMEQVKPCLVLNKMDRLITELKLTPLEAYTRMKGIISEVNSIMSGFRSEKYLSDVDSIL
AGAEEKANGREQEDGDSFDDYDDSESEKDVFSPQQGNVAFSSAVDGWAFRTYQFAELYRA
KRGFSLASLRKSLWGDFYFLAKEEKIVGKKAAGKHKPMFVQFILEPLWQVYNACMEGKQG
IEMLNKVVEKMKLTISVRELQNRDPKIVLQAVMSKWLPLHDNILSMVLEVLPDPATAQAY
RTTTMYPRRLVASSTSQDVEAELEAVRRAVESCDDRPEAPCVTFVSKMFAVPVEMMPRGE
DLFKTDWNAGDIDASHRECFLAFARVFSGVISVGQHVFVLSALYDPTEAQQEKKNLQVAR
VEALYSMMGRGLEPCDKATAGNVVAIRGLGQYILKSATLSSTQNCWPFAGLNFQAAPIVR
VAVESSDPANMAALSRGLRLLNRADPFVEVSLSSTGEHVISAAGEVHLELCIKDLKERFA
CVELEVSPPLVAFRETIDENATEVKTDYVEVTTPNGRCTIRVHVARMPSSLTQLLDESAE
LLKNLVSGKKKPQTAIEGKADPVEAMKARLLAAASGDSEKKKGDGSFEKELKRIWALGPR
GVGPNILLVPDYDRPGRPKGGTSIDGSTSTAEIRGSPYVSELLGFAVAHKQSTDPESSGL
LSAEADGLEGNIVAGFQLATGAGPLCEEPLWGLVFTVEAFISEASTAESAESQNQPGTST
SYGVFSGQVITAVKEACRAAVLHRCPRLVEAMYLCEVSTTSQYLGQMYGVLAKRRARVLK
EEMREGTDMFTVHAFMPVAESFGFADELRRKTSGAASPQLMLSHWEALAEDPFFVPKTEE
ELEEFGDGSSVPQNTARKLIDAVRRRKGLHVEEKVVRHATKQRTLARKV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggcggcgaggacgcgaaatatttgcattctcgcgcacgtcgatcacggc
aagaccaccctcgcggatcatctcatcgccggcgctggaggcggtgtcttgcatcccaag
caagctggtaagctgcggtacctggattacagggacgatgagcagcagcgcgccatcacg
atgaagagcgcctcgattgcgcttagattccagggacattccgtcaatctcatcgattct
cccggccacattgatttctgcagcgaggtttccaccgccgtgaggctgagcgatggggcg
ctggtccttgtggatgtttgcgagggcgtccacattcaaacacacgcggtgcttcgccag
gcctggatggaacaagtgaagccgtgcttggttctcaacaaaatggatcgtctcatcacc
gagctcaaattgacgcctttggaggcctacactcgaatgaagggaattatctccgaagtg
aacagcataatgagtggatttcgatctgagaagtatttatcggatgtggattccattctt
gcaggagctgaggagaaggccaacggacgcgagcaagaagatggtgattcttttgacgac
tacgatgatagcgaatccgagaaggatgttttctctccgcagcagggaaacgtagccttc
tccagcgccgtcgatgggtgggcttttagaacgtaccagttcgcggagttataccgggca
aagcggggatttagtcttgcgtcgctgaggaagtctctgtggggtgacttctacttctta
gcaaaggaggagaaaatcgtggggaagaaggccgctgggaagcacaagccgatgttcgtc
cagttcatattggagccgctatggcaagtttacaacgcctgcatggaagggaagcaaggg
atcgaaatgcttaacaaggtggtggagaaaatgaagctcaccatatcggttcgtgagctt
cagaacagggatccaaagatagttctgcaggcggtcatgagcaagtggcttcctctccac
gacaacatcttgtcaatggtgctggaagttctaccagatccggccacagctcaagcatac
cgcacaacaacaatgtatcccagaaggcttgttgcttctagtaccagccaggacgtagaa
gctgagcttgaagccgtgagaagggccgtggagagttgtgacgatcgaccagaggctcca
tgcgtgacgtttgtttcgaaaatgtttgcggttccagttgagatgatgcctcgcggagag
gatcttttcaaaacggactggaatgcaggtgatatagatgcatcacacagggaatgtttc
ttagctttcgccagggtcttcagcggagtgatatcagtgggacagcacgtgtttgttctc
tcggctctctacgatccaactgaggcgcagcaagaaaaaaagaacctccaggtagcgaga
gtggaagcgctttacagtatgatgggccgaggcctggagccttgtgacaaagccactgcc
ggcaacgtcgtggccattcgaggactcggccagtatatcttgaagtcggcaactctatcg
tctactcagaactgttggcctttcgccggtttgaacttccaggctgctccaatcgtccgt
gtggcagtggaatcatcggatccagcgaacatggctgcgctctcgagaggcttaagacta
cttaacagagccgatcctttcgtggaagtgagcctctccagcactggcgagcacgtcatc
tccgcggctggggaagttcatttggagctgtgcatcaaggatttgaaagagcggttcgcc
tgcgtggagctggaagtatctccgcctctagtggcatttcgagaaaccatagacgagaac
gcgaccgaggttaagaccgactatgtggaagtgactacacccaacggccgatgcactata
cgtgttcacgtcgcgaggatgccgagctcactgactcagctgctggacgagagtgcggag
ctgctcaagaacttggtctccggcaagaagaagccgcagacagccatcgaaggcaaagcc
gatccggtggaagcaatgaaagcacggctactagcagctgcatccggtgattccgagaag
aagaaaggtgacggaagttttgagaaggaactgaaacgaatctgggctcttggcccgcga
ggagtgggaccgaacatccttctcgtcccggactacgaccgcccaggacggcctaaaggt
ggtacatccatcgacggtagcacgtctacagcagagatacgaggctctccatacgtgtcg
gagctactgggcttcgctgtagctcacaagcagagcactgatccagagagctcgggttta
ctctctgccgaggccgatggactggaaggcaacatagttgcggggtttcaactagctaca
ggagccgggccactgtgcgaggagcctctatggggactggttttcacggtagaagctttc
atctccgaggcaagcacggccgagagcgcggaaagccaaaaccagccgggcacttcgacg
tcctacggcgtcttctctggccaagttatcacggcggtgaaggaagcttgccgggcagcg
gtgctacacaggtgcccgaggctcgtggaagcgatgtatctgtgcgaggtgagcaccacc
tcgcagtacctgggacagatgtatggcgtgctggccaagaggcgagctcgggtgctcaag
gaggagatgcgcgaggggacggacatgttcacggtgcacgccttcatgccggtggccgag
agctttggattcgcggacgagctgaggaggaagacgtccggcgccgcgagcccgcagctg
atgctgagccactgggaggcgctggcggaggatcccttcttcgtgccaaagaccgaggag
gagctggaggagtttggggatggatccagcgtgccgcagaacacggccaggaagctcatc
gatgcggtgaggaggaggaaagggctgcacgtcgaggagaaagtagtgcgccacgctacc
aagcagaggacgctggccaggaaagtttga
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integrated database retrieval system