Selaginella moellendorffii: SELMODRAFT_171333 Help Entry SELMODRAFT_171333 CDS       T01496                                  Symbol COP1-1 Name (RefSeq) hypothetical protein   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism smo  Selaginella moellendorffii Pathway smo04120   Ubiquitin mediated proteolysis smo04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:smo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     SELMODRAFT_171333 (COP1-1)  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     SELMODRAFT_171333 (COP1-1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:smo04121]     SELMODRAFT_171333 (COP1-1) Enzymes [BR:smo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      SELMODRAFT_171333 (COP1-1) Ubiquitin system [BR:smo04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     SELMODRAFT_171333 (COP1-1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      SELMODRAFT_171333 (COP1-1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 EIF3I Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st zf-C3HC4_2 zf-C3HC4 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-C3HC4_3 WD40_like zf-RING_2 Beta-prop_SCAP WD40_RFWD3 Beta-prop_DCAF12 zf-RING_UBOX Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st WDR90_beta-prop_4th zf-RING_5 U-box TAF1C_beta-prop zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf-Nse Tantalus Motif Other DBs NCBI-GeneID:  9646461 NCBI-ProteinID:  XP_002970454 JGI:  171333 UniProt:  D8RGE3 LinkDB All DBs Position Unknown AA seq 646 aa AA seqDB search MSFSSEQQQQQQQQQGPRLLADKDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKN CPCCGVYLTSSQLYPNFLLNKILKKVATSQISCASPTEQLRFALQQGVDVPLKEIDSLLV LLSDKKRKAEHEEAEVNMEVLLEFLQRSRQQKMEELSEIQGDLQSLREDISAVEIQRQEL LKSRQTSSLKWRFLLDCPALDCAAQENPYNRPAVPLHRVGQAGAALLGGEQRKATRGPLV KKNGGISNGTSDFEPLPCKTAKKKRMLNQFEDLQDCYLNKRRRDRQMKKLEAIVKKEKDE EGCGGFNQPSGLEDFRSILAGFTRYSRLELVAELRHGDLFHSSNIVSSIEFDRDDELFAT AGVSRRIKIFEFATVVNELADVHCPVAEMSTRSKLSCLSWNKYIKGQIASSDYEGTVTVW DVNSCQSVMEYEEHERRAWSVDFSRTDPTMLVSGSDDGKVKLWCTRQETSVLNIDMKANI CCVKYNPGSSNFVAVGSADHHIHYYDLRNSKSPLHVFSGHRKAVSYVKFVSPNELASAST DSTLRLWDVQKSSQIRSLTGHANEKNFVGLTVNSEYIACGSETNEVVVYHKEVPKPAARH RFTNHDSEESDDDVFHFISAVCWKSDSPTMLAANSQGTIKVLVLAP NT seq 1941 nt NT seq  +upstreamnt  +downstreamnt atgagtttctcgtccgagcagcaacagcagcaacagcagcagcaagggccgcggctgttg gcggataaggatttccagtgcccgatttgcatccagacgatgaaggatgcgtttctcacg gcttgcggccacagcttttgctacatgtgtatcatcacgcacctcaacaacaagaagaac tgcccgtgctgtggagtctacctcactagcagtcagctttaccccaattttctattgaac aaaatacttaagaaggttgctacgtcgcaaatctcgtgtgcgtccccgacagagcagctt cgttttgctctacaacagggggtcgacgttccactcaaagagatcgattcattgctggtt ttgttgagcgataagaagcgaaaagccgagcacgaggaagccgaggtgaacatggaggtt cttctcgagtttttgcagagatctaggcagcaaaagatggaagaactttctgagattcaa ggggacttgcagtcgctgagggaggacatctctgctgttgagatccagaggcaggagctg ctcaaatcgagacaaacaagctcgctgaagtggcgctttcttcttgactgcccggctctc gactgtgcggctcaagagaacccgtacaaccgtcctgcggttcccttgcatcgtgtcggc caagcaggggcagccttgctcggtggagaacaaaggaaagcaacgagaggtcctctcgtg aagaagaatggtggcatttcaaatggtacctctgactttgaaccgctgccttgtaagacc gcaaagaaaaagaggatgctaaaccagtttgaagacttgcaagattgttacttgaataag agacgacgtgatcgtcagatgaaaaagcttgaagccattgttaaaaaggagaaagacgaa gaaggctgtggtgggtttaatcaaccttcaggccttgaggactttagatctattctcgct ggcttcaccagatatagtcgtttggagctggtggctgagctacgacacggagacttattt cattcttctaacattgtttcaagtattgaatttgacagggacgacgaactctttgccact gcaggagtttcgcggcgaatcaaaattttcgaatttgcaacggttgtcaacgagcttgca gacgtccattgtcctgttgccgagatgtctacgcggtcaaagctaagctgcctaagttgg aacaagtacatcaagggacaaatcgcgagcagcgattatgaaggcactgtaactgtttgg gatgtaaattcttgccagagtgtcatggagtacgaagagcacgagagaagagcctggagc gtcgatttctccaggacggacccgacaatgctagtgtctgggagtgacgacggaaaggtc aagctgtggtgcaccaggcaggagacaagtgtcctgaacattgacatgaaggcaaacatt tgctgtgtcaaatacaatcccggatctagcaattttgtcgcggtgggctcggccgatcat catatccactattacgatctccggaactccaagtcgcctctacatgtctttagtggtcac cgaaaagccgtctcgtatgtaaagtttgtatcccccaacgagttggcctcggcttccact gacagtacactgcgattgtgggacgtccagaagagctcccagatacgcagcctcacaggc catgctaacgagaagaactttgtaggcttgacagttaacagcgagtacattgcgtgcggt agtgaaacgaacgaagtcgtggtgtatcacaaggaagttcccaagccagcagcaaggcac agattcacaaaccatgactcggaggagagcgacgacgatgtgttccacttcatcagtgct gtgtgctggaagagcgatagcccaacgatgcttgcggcaaacagccaagggacgatcaag gttctggtgcttgctccgtga

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