Selaginella moellendorffii: SELMODRAFT_172620
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Entry
SELMODRAFT_172620 CDS
T01496
Symbol
CUL4-1
Name
(RefSeq) ubiquitin-protein ligase, Cullin 4
KO
K10609
cullin 4
Organism
smo
Selaginella moellendorffii
Pathway
smo03420
Nucleotide excision repair
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_172620 (CUL4-1)
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_172620 (CUL4-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_172620 (CUL4-1)
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_172620 (CUL4-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_172620 (CUL4-1)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
SELMODRAFT_172620 (CUL4-1)
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SELMODRAFT_172620 (CUL4-1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
SELMODRAFT_172620 (CUL4-1)
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_172620 (CUL4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
9651024
NCBI-ProteinID:
XP_002972211
JGI:
172620
UniProt:
D8RM97
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MVVDVKATGHGLSVASPVTAVGLAGGSNSTGTTANLSRKKATPPQPTKKLVIKPFKDKPK
LPANFEDATWDKIRAAVSAIHVKQPVSCSLEQLYQNVEDLCLHKLSGNLYQRLQQECETH
ISAKLYALVGQSPDPVVFLSHVERCWQDHCDQMLMIRSIALYLDRTYVIQNSSVRSLWDM
GLQLFRKHLTSCPEVEHKTVTGILRLIEKERTGETVDRTLLKHLLRMFSALGTYSESFEK
PFIDCTAEFYAAEGTRYMQQTDVPDYLRHVEARLHEENERCLLYLDANTRKHLISTSEKQ
LLERHSPTILDKGFGMLMDANRVADLHRMYLLLARVGALESLKQALSAYIKATGHSIIVD
EEKDKDMVSTLLDFKARLDMIWEESFSKNEPFANTIKEAFEHLINLRQNRPAELIAKFID
GKLRAGNKGTSEEELESMLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS
MISKLKTECGSQFTNKLEGMFKDIELSREINESFKQSSQARTKLPAGIEMNVHVLTTGYW
PTYPPMDIRLPHELNVYQDIFKQFYLSKHSGRRLMWQNSLGHCVLKAEFPKGKRELSVSL
FQTVVLMLFNDSLRLSFQDIKDSTGIEDKELRRTLQSLACGKVRILQKQPKGREVEDDDV
FTFNEDFTAPLFRIKVNAIQLKETVEENASTTERVFQDRQYQIDAAIVRIMKTRKVLSHT
LLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQVYNYLA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggatgtcaaggcgacgggccacgggctgagcgtggccagccccgtcaccgca
gtcggcctcgccggtggaagcaacagcaccgggacaacggccaatctcagccgcaagaag
gcaacgccgccccagccgaccaagaagctggtcatcaagcccttcaaagacaagcccaag
ctgccggccaactttgaagacgctacctgggacaagattagagccgccgtgagcgccatc
cacgtaaagcagcccgtctcttgtagtctggagcagctctatcagaacgtggaagatctg
tgcttgcacaagctttcgggaaacctgtaccagcgtctgcaacaagaatgtgaaacgcac
atttccgccaagctgtatgctttggtcggccagagccctgatcccgtcgtctttctctcc
catgtggaaagatgctggcaggatcactgcgaccaaatgctcatgatcaggagcattgca
ctctaccttgaccgcacctacgtcatacaaaactccagcgtgcgctcactctgggacatg
ggcttgcagctctttcggaagcatctcacgtcttgtccggaggttgagcacaagacagtt
actgggatactgaggctcattgagaaggaaaggacgggggaaactgttgatcgcacactt
cttaagcatctcttgagaatgtttagtgcgcttggaacatacagtgaaagctttgagaaa
ccatttatcgactgcacggctgagttttacgcggctgaaggaacacgatacatgcaacag
actgatgtgcctgactaccttaggcacgtggaggccaggttgcacgaagagaacgagaga
tgcttgctttatctggatgccaacactcgtaagcacttgatatctacctcagagaagcag
ttgcttgagcgccattctcccaccattttggataagggttttggaatgcttatggacgca
aatcgtgtcgcggaccttcaccgtatgtaccttttacttgccagagtcggtgcactggag
tctctaaagcaagcccttagcgcgtacatcaaggcaactggtcatagcattatcgtggac
gaggagaaggacaaggacatggtttctacgctgctggatttcaaggcccggcttgatatg
atctgggaggaaagcttttcgaagaacgaaccgtttgcaaacacaatcaaagaggcgttt
gagcatcttataaatttgagacagaaccgacctgcggagctcattgctaaatttatagat
ggaaagctaagagctgggaacaaaggaacgtctgaagaagaactcgagagtatgcttgac
aaagttttggtccttttcagatacattcaaggtaaggatgtctttgaagcattttacaaa
aaggatctggcaaaacgcttgctattgggcaaaagcgcatctatcgatgctgaaaagtcc
atgatttcgaagctaaaaactgagtgtggtagtcaatttacaaataaactcgaaggcatg
ttcaaggacattgaactttcaagggaaataaacgagtcctttaagcaatcctcacaagcc
aggacaaagctaccagctggaattgagatgaatgtgcatgtgttgaccaccgggtattgg
cctacgtacccgcctatggatattcgtcttcctcatgaactcaatgtctatcaggacata
ttcaagcaattttacttgagcaagcacagtggcaggcggctgatgtggcagaattctttg
ggtcattgtgttttgaaagccgagtttcccaagggtaagagggaactatctgtttcacta
tttcagacggtggtacttatgcttttcaacgattcattaaggcttagctttcaagacata
aaggactcaacgggtattgaagacaaagagctccgcaggactctgcagtccttggcttgc
ggcaaggttcgaattttgcaaaagcaacccaaagggagagaggtggaggacgacgacgtg
tttacgttcaatgaggacttcacggctcctttgttccggatcaaggtgaatgcaatacag
ctcaaagagacggttgaagagaatgcaagtaccacagagagagtattccaggatcggcag
tatcagattgatgcggccattgtaagaattatgaagactaggaaggtcctgagccacact
ttactgataacggagctgttccaacagctcaagttccctataaagccagcggacttgaag
aaacgtatcgagagcctgatcgaccgcgagtacttggagcgagacaagaacaaccctcag
gtatacaattatctcgcatga
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integrated database retrieval system
