Selaginella moellendorffii: SELMODRAFT_174260
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Entry
SELMODRAFT_174260 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_174260
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smo04040
]
SELMODRAFT_174260
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
SELMODRAFT_174260
Ion channels [BR:
smo04040
]
Other channels
Mechanosensitive channel (Piezo)
SELMODRAFT_174260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piezo_THU9_anchor
THU_Piezo1
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
9637190
NCBI-ProteinID:
XP_002974729
JGI:
174260
UniProt:
D8RUP6
LinkDB
All DBs
Position
Unknown
AA seq
1624 aa
AA seq
DB search
MLYCELHISILYILQLQSISALITAHSKILKPVLSQLGKGDSILVNELRLELLAGIWNKA
TYHDYIPVAALLCFSAVQNHGIKVISSLSAVARQSALKYRPYVLSVYGSKSFAYNFEPSS
TGKHLVSTINFTHLLPAENWITNHLATVGEHFRATYRSFGTYIVYATVLITVYAAEPNYI
AFGFLALLLFWIIGRQVLGKTEWILWSPLFLYTCLVFVLRYLLSVFPDLQPFAEKLVDLK
GDLGFDGNASLFLHVWDSLAILAVLQLYRFERSQSCLEEDSIHFPCFMSNLDFVKRLLIL
HSGKVLFVAVFYASIFPVGGFGFVYLIMLVISCAVPKSSPLSSQLFAAYTGLLLFLEYLF
QLVDRQDGCLAQNADLIHWLGLRKYEEGPWGIEAGSRSKTLVILACMLQYCSFQWLEQVP
SSLRRNEEPCMLFSLPFSGRADSDDRRQATFHRVQPHSPRLDEPLIRKPEQAINAEAPDS
KKYVHRSPSLTPKESRKWSRRALIMKQETYEAQCQALKMWGQFILENFFTIFGVEMIMLC
LLVAAFAVVNVFSLLYILILALCIILSKKWLRPLWPAFTVLFAGVLLYEYATLAKLPPPW
SVSNESTKRCHDCWADLKGKSKFCWSCWLGMVDDRQVLVAYFMVFIVTSFQLRANKLLET
VSLQWTGISATHRVAWAEMSYETTVHWTWLDYLRFFFYRHLLHAVLLLVFITGTLQYDLL
HLGYLAFSMVFFHMRTTVMRRRNTIFLFLRLYNFSLIVASLVFQAPFFGFVAGCSPSSIF
GLYKYDYGFKITARSALVDITIFCLVSLQSRVFRTKEFEQVLRYLAAEQFEALACAHERK
AEWKKEQLQRVREIEEKKSQRRLQVDKMKMEMVPLQLRLDVLNSASKFREAFSPSNIPRF
LPNKDAAASGTPSRLVNSISDSALLDHSGHRRDSGADSCRRRRKLFLEQDDNEIKPEVLD
RGIILQNLDKEDSMVKTPSMKHSLLSGVSFLENGVAQMHDIGNKALANLVGLLNIENPDS
DEAGSSSADEGDDQRRLPKHISPGKLEDQKSPMFETRQRLSILSTYVYSLVLANTDVVCY
VLFVLVYVWNFSLLTLVYPACLFLYALLVNPGPTQLFWSAMLMYTEILILLQYMYQTLVN
HCGHDELPSWLKQIGIPGRNMNRSFVASVLPLFLVYLATLVQNSIKDREGEWMLATDSNS
FFTSRRSPDLENPNQNFSAGKFWTWIAGYCIGSLKTVLKCWRSLTSGSEVPPHFVQVKLS
VSKWSEHGIQPERIETAFNRLLIVVRYESSSSSGAVLEDASRVRVESLECGTDESTAFAM
LEVIHAAPALGGPVSDLFTSLTPASDVATEIVKAKQDGLLEQANFPYPILSVIAGGRRQV
DLYAYVFGTDLIAFMYMALFYQSFIKSTPEFLDVYQLEDQFPKEYVFALITLFFLIVLDR
VLYLSAFATGKVIYYFATLIFFTGYITNFVWGMELKHNNTGTFFQLLPLRGFFLLKALSL
AFQAQQLRFGLPHKNTLYEQFLTRKINSLSWLGFRIYRSLPFLFELRCVLDWSCTTTSLS
MYDWLKLEDIYASLFLVQCDNKLAREKHQLGQKRSIWVKFTNGVCLFLLLICVIWAPMLI
YSSG
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgctttattgcgaattgcatatttctattctttacatcttgcaactccaatcgatttca
gcactcatcactgctcatagtaaaatcttaaagcccgttctctctcaactaggtaagggt
gactcaatcctggttaatgaactccgattggaattacttgcagggatatggaacaaggca
acatatcatgattacatacctgtggcagctctattgtgcttttctgcagttcagaatcat
ggaatcaaagtgataagctctctgtcagcagtggcacgtcagagtgctctgaaatacagg
ccttatgtgttatcagtttacggttcaaaatcctttgcatataatttcgaaccttcctct
actggtaagcatctagtttcaaccattaatttcacacatcttctccctgcagaaaactgg
atcactaatcaccttgctactgttggtgagcattttcgtgcaacttaccgttcgtttgga
acatatatcgtgtacgccacagtcctcattacagtctatgcagcggagccaaattatatt
gcgtttggcttccttgctctgctcctcttttggattattggtcgacaggtgctcgggaaa
acagaatggatattatggtctccacttttcctctacacatgcttggtttttgttttgcgg
tacctcctcagcgtttttcccgacctgcagccatttgctgagaaacttgtggacttgaag
ggtgacttgggctttgatggaaacgcgtctctcttccttcacgtatgggattctctagct
atattagctgtcctgcagctctacagatttgagcgatcccagtcttgcttggaagaagac
tccattcactttccgtgttttatgagcaacctggacttcgtaaagcggctccttatacta
cacagtggaaaagttttgtttgtcgccgtgttttatgcttctatttttccggttggcggt
ttcggatttgtctaccttattatgctggtgatatcctgtgccgtgccgaagtcttctcct
ttatcttctcagcttttcgctgcgtatactgggctgcttttatttctcgagtatctgttc
cagctggttgataggcaggatggctgcttggcacaaaatgccgaccttatacactggcta
ggacttcgtaaatacgaggaaggtccctggggtattgaagctggaagccgcagcaagaca
ctggttatactggcttgcatgctgcaatactgctccttccaatggctagaacaagtacca
agttctttacgacgaaacgaggagccatgcatgctgttttctctaccattcagcgggaga
gcagacagcgacgatcgtcgtcaggccacattccatcgcgtccaaccccacagtcctcgt
cttgatgaacctcttatacggaaaccggaacaggctatcaacgctgaagcgcctgatagt
aaaaaatatgtccacagatctccttctctgacaccaaaggaaagcaggaaatggagtaga
cgagcgctaattatgaagcaggagacttacgaagcccaatgccaggctttgaaaatgtgg
gggcagtttatactcgagaattttttcacaatattcggcgtcgagatgatcatgctatgc
cttctggtcgcagcgtttgccgttgtcaacgtcttttctttgctatatattctcatactc
gcgctatgtattatattgagcaagaaatggcttcgtccgctatggcctgccttcacagtt
ctgttcgccggcgtactcctctacgagtatgcaacgttggcaaagctcccgccaccttgg
agtgtttcaaatgaatcaacgaaacgttgtcacgattgctgggctgacttgaagggaaag
tcgaagttttgttggagttgctggcttggtatggtggacgataggcaggtgctagttgca
tattttatggtcttcatcgttacgtctttccagcttcgggcaaataagttgctcgaaact
gtatcactacagtggactggcatatccgcaacacacagggtagcctgggcagagatgtct
tacgagacgacggttcactggacatggctggactatcttcgtttctttttctatcgccat
cttttacacgctgttttgctgctagttttcatcacgggaacattacaatatgacctcttg
cacctcggctacctcgcattctccatggtattcttccacatgcgaactacagttatgagg
agacgaaacactatttttctcttcttgaggctatacaatttcagtcttatagtggcgtcg
ctcgtcttccaagcgcctttctttggatttgtagctggttgctcgccgtcaagcatcttt
ggtctctacaaatatgactacggcttcaagatcacagcccgctctgctctcgtggacatt
acaattttctgccttgtaagcttgcagtctcgagttttcagaacaaaggagttcgagcag
gtccttcgttatctcgcggcagagcagtttgaagcgctggcctgtgctcacgaaagaaaa
gcagaatggaagaaggagcagctgcaacgagttcgagagatagaagaaaagaaatcacag
aggcggttacaggtggataagatgaagatggaaatggttcccctacagctacgtctggac
gtgctgaactctgcgagtaaattcagggaagcgttttctccatcaaacattcctcgtttc
ttgccaaataaggatgcggcggcctctgggactccttctcggctggttaactccatttcg
gacagtgccctgcttgatcactctggacaccgtcgtgactctggtgctgattcttgtaga
aggaggcggaaactctttttggaacaggatgacaacgagataaaacctgaggtgttggac
aggggaattatcttacagaacctggacaaagaagacagcatggtgaagacaccttcaatg
aagcatagtcttctatctggggtttccttcctcgaaaacggtgtcgcgcaaatgcatgac
atcggaaacaaggcactcgccaacctggtcgggcttctcaacattgaaaatccagattcc
gatgaagcaggcagctcttctgctgatgaaggtgatgatcaaaggcgactacccaagcac
atctctcctggaaaacttgaagatcagaagtctcctatgtttgaaacacgccagcgcttg
agcattctaagcacctacgtctactcactggtccttgcaaacacagacgttgtctgctac
gtgcttttcgtgcttgtctacgtatggaacttcagcctccttactttggtgtatcctgcg
tgcctgtttctctacgctctactggtgaatccaggaccaacacaactattctggtcagca
atgcttatgtacacagaaatcctcatcctgcttcagtacatgtaccagacactggtaaac
cactgtggccacgacgagcttccatcatggttgaagcagatcgggattccaggaagaaac
atgaaccggtcgtttgtggcgagtgttctaccgctcttcctggtctatctagccaccttg
gtccagaactctatcaaagaccgtgaaggggagtggatgcttgccacggactctaattct
ttcttcacttcccgacgttcgcccgatctggaaaatccaaaccagaacttttctgccgga
aagttctggacgtggattgccggctactgcattggaagcctgaaaaccgtcttgaagtgc
tggcgttctcttacgagcggctccgaagtccctcctcacttcgttcaagtaaagctgtcc
gtctccaagtggtccgaacacggtatacagccggagagaattgagaccgctttcaaccgg
ctgctaatagttgtgaggtacgaaagctccagcagcagcggtgcagtgctcgaagacgct
agccgggtgcgtgtggagagcctagagtgtggaacggacgagtctaccgcgttcgctatg
ctggaagttattcatgcagcgcctgcattgggagggcctgttagcgacctcttcacatcc
ttgactccggcttcggacgttgccacagagattgtcaaggccaaacaggacgggttgctc
gaacaggccaactttccatatcccattctatctgtcatcgctgggggaagaagacaagtt
gatctttacgcctacgttttcggcacggaccttatcgcgttcatgtacatggcattgttc
taccaatctttcatcaagagcacaccagagtttctcgacgtctaccagctcgaggatcaa
tttccaaaagaatacgttttcgccctcattacgctgttcttcctcatagtactggataga
gtactgtatcttagtgcgtttgcaaccgggaaagtgatttactattttgctacgctcatt
tttttcacgggctacataacaaattttgtttggggaatggagctgaagcacaacaacact
gggacattctttcagcttcttccgcttcgtggtttcttccttctcaaagctttatctctg
gcgtttcaggcacagcaattgcgatttggtttgccacacaaaaacacgctgtacgagcag
tttttgacgagaaagatcaacagcttgagctggcttggctttcgtatataccgatccttg
cctttcttgttcgagcttcggtgcgtactcgactggtcgtgcacaacaacttctctttca
atgtacgattggctaaagctggaagatatctatgccagcctctttttggtgcagtgcgat
aataaacttgcgcgagagaagcatcagctgggacagaagcgaagtatttgggtcaagttt
acaaatggtgtttgccttttccttctattgatctgcgttatctgggctccaatgctgatt
tatagtagcgga
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