Selaginella moellendorffii: SELMODRAFT_174745
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Entry
SELMODRAFT_174745 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00906
Carotenoid biosynthesis
smo01100
Metabolic pathways
smo01110
Biosynthesis of secondary metabolites
Module
smo_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SELMODRAFT_174745
Enzymes [BR:
smo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
SELMODRAFT_174745
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_oxidored
HI0933_like
GIDA
FAD_binding_2
FAD_binding_3
Thi4
Pyr_redox_2
GMC_oxred_N
PCMT
Motif
Other DBs
NCBI-GeneID:
9629084
NCBI-ProteinID:
XP_002975224
JGI:
174745
UniProt:
D8RVS5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MAPAILAPCGVSARPTNPLPCFGAPSKQRSVRLGTHAGFAAAAVSTSQASVSAAPSDGSQ
GFFAEKRYDAIVVGAGIGGLVAASQLAIRGASVLLLEKYVIPGGSAGFFKRDGYTFDVGS
SVMFGFSDKGSINLITRALAAVGRKLELIPDPTTVHYHMPNNLSVRVHRDYEDFIGELVD
QFPHEEKGIRGFYGECWKVFNALNSLELKSLEEPLYLFGQFFRNPLACLTLAYYLPQNAG
DIARKYIKDPVLLSFIDTECFLVSTVDALCTPMINASMVICDRHFGGINYPVGGVGLIAQ
ELADGLIERGGEIRYKSNVKKILMEQNKAVGVQLADGTRLLGKTVISNATRWDTFEKLLD
SEMPDEERRFQKVYKKAPSFLSIHMGVRAEVLPQGTECHHLVLEDSWDNLEKPYGTIFLS
IPTVLDPSLAPEDRHILHIFTTAWADDWQGLSSSEYNDKKEAVADVIVKRLEAKLFPGLK
DATVLREVGTPKTHRRFLARDQGTYGPIPVGKPKGLLGMPFNTTAVEGLYCVGDSCFPGQ
GVIAVAFSGMMCGHRVAVDLGIEQGSRILDQALSKTLSWFRTLA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcaattctcgctccttgtggagtctccgcaagacccacgaatcctttgcct
tgttttggagctccaagcaagcagagatccgtgcgtcttggcacccacgccggttttgct
gcggcggctgtttccacgagccaagcttccgtctcggcagctcctagcgatggaagccag
ggattcttcgcggagaagaggtacgatgcgattgtggttggcgctggaatcgggggcttg
gttgcagcaagtcaactcgcaatccgtggcgcttcggtgctgctgctagagaagtacgtg
attcctggtggaagtgctgggtttttcaagcgagatggctacactttcgatgttggatcg
tccgtcatgtttggtttcagcgacaaggggtcgatcaatctgataactcgtgccttggct
gctgtcggacgaaagttggagctcatacccgatcccaccactgtccactaccatatgcca
aacaacttgtccgtgagagttcatcgagactacgaggatttcatcggcgagcttgtcgac
cagtttccacacgaagagaaaggaatacgaggcttctacggagaatgctggaaggttttt
aacgcattgaattcgctggagcttaaatctctcgaggagccgctctaccttttcggccag
tttttcagaaacccactggcttgcttgactcttgcgtactatcttccccaaaatgctggt
gatattgcgaggaagtacatcaaagatccagttttgctgtcgtttatagataccgaatgc
ttcctcgtcagtaccgtcgacgcgttgtgtacaccaatgatcaatgcgagcatggtgatt
tgcgatcgacacttcggagggatcaactatcccgttggaggtgtcggattgatagcacaa
gagctggcagacggcctgattgagagaggaggcgaaattcgctacaagtccaacgtgaag
aaaatcttgatggagcaaaacaaagcggttggcgtgcaactagccgatggaacacgatta
cttggcaaaacagttatctccaatgctacgcgatgggatacttttgaaaagctgctcgat
tctgaaatgccagacgaagaacgacgcttccagaaagtctacaagaaagctccatcgttt
ctctcaatacatatgggagtgagagccgaagttttgcctcaaggaaccgagtgccatcat
ctcgttctcgaggactcgtgggataacctcgagaagccttatggtacgatcttcttgagc
attcccactgttttggatccctcgctagctccagaggatcgccatattcttcacatattt
accaccgcatgggccgatgattggcaagggttaagtagctcggagtacaatgacaagaag
gaggctgtggccgatgtgatcgttaagagactggaagcgaaactatttcccggtctcaag
gacgcaacagttcttcgagaggtcgggacgcctaaaactcacagacgttttctcgctcga
gaccaaggaacttacggaccaatccctgttggaaaacccaaaggacttctcgggatgcca
ttcaacacaacagcagtggaaggactatactgcgttggagatagctgctttcccggccaa
ggagtcatcgcggtagccttctctggaatgatgtgtggtcacagagtggctgtagatctc
ggcatcgagcaaggctcacggattttggaccaagcgctgagcaaaacgctgtcatggttt
agaacgctggcttaa
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