Selaginella moellendorffii: SELMODRAFT_175180
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Entry
SELMODRAFT_175180 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SELMODRAFT_175180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smo01007
]
SELMODRAFT_175180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_175180
Enzymes [BR:
smo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SELMODRAFT_175180
Amino acid related enzymes [BR:
smo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SELMODRAFT_175180
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SELMODRAFT_175180
Prokaryotic type
SELMODRAFT_175180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
9645591
NCBI-ProteinID:
XP_002975840
JGI:
175180
UniProt:
D8RYL6
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MPTVSVARELLHTMLGRVYTQEEFDELCFVIGIELDDVTTEKAIIRKEKHLQENEADEDE
EVIYKIEVPANRYDLLCPEGICRQLRIFLRVEKMPTYRLSRLPDSSILKMIVKPETAVIR
PFVVCAILRGITFDQARYASFIDLQDRLHQNICRKRTLVAIGTHDLDTLQGPFTYEALPP
SEIKFIPLKQAQEFTAKELMEFYKSDLKLKKFLHIIEDSPVFPVIYDSNRTVLSLPPIIN
GAHSAISLNTKNVLIECTATDLTKAKIVLNTMVAMFSGYCDEKFEVEPVDVVDPVGRVTR
YPDLSLRTMDVDLSYIKKSVGVPLQAGEIVDLLSKMQLTSKEIDGDKIQVSIPPTRSDIL
HPCDVMEDVAVAYGFNNIPKTRPKTSTEGRQQPLNEFSDLLRLELAMAGFSEVLNWVLVS
KKENFTLLNRKDDDKIAAIVSNPRSSDFEVLRTSLLPGILKVMEHSKDVPRPVKVFEISD
VVLLDPSKDVGAANSRHLAALYCSTTSGFEIIHGLLDRIMNVLNVPVDGYTVGPSNEPEL
FKGRQAKIFYKGSCVGSFGIIHPQVLKNFDIPDPCSYIEMEIERFL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgagcgtcgccagggagttgctccatacgatgctggggagggtttacacg
caagaggaattcgacgagctgtgcttcgtgattggaatcgagctggacgatgtgacgaca
gagaaagctataatcaggaaagagaagcatttgcaggagaatgaagcggacgaggacgaa
gaggttatctacaagatcgaggttcctgcaaaccgatatgatctcctttgtccggagggg
atttgtcggcaattgcgaatcttcttgcgggtcgagaaaatgccaacttacagactttcg
agacttcccgactcctcaatcctgaagatgatcgtgaaaccagagactgcagtgatcagg
ccgtttgtagtttgcgccattctcaggggtatcactttcgatcaagcacgctacgccagt
ttcatcgacctccaagacagactccatcaaaatatttgcaggaagagaaccttggttgca
attggaactcatgatctggacacactacagggacctttcacttacgaagctcttcctcca
tcagaaataaagttcatcccattaaagcaggcacaagagtttacagcaaaagaattgatg
gagttttacaagtcggatttgaagctaaagaaatttctccacattatagaggactcgccg
gtcttccctgtgatatacgacagcaacaggacagttctttcgctgccgccgattataaac
ggtgcccattcggctatcagcttgaacaccaagaacgttctcatagaatgtaccgccacg
gatttaaccaaggctaaaatcgtattaaacacgatggttgcaatgttttccgggtactgc
gatgagaaattcgaagttgaaccggtcgatgtggtggatccagttggaagagtcacgaga
tatcctgatctttccttgcgcaccatggacgtagatttatcatacattaagaaatccgtt
ggagtaccacttcaagctggagagattgtggatctgctgagcaaaatgcaattgacgtct
aaggagatagatggggacaaaatccaagtgtctataccgccaacaagaagtgatattctg
catccttgcgatgtaatggaggacgttgctgttgcgtatggctttaacaacattccaaag
actagaccaaaaaccagcactgaagggaggcagcaaccccttaacgagttcagtgacttg
ctaagacttgagctggcaatggccgggttcagcgaagtccttaactgggtcctagtgtcc
aagaaggaaaactttacgttgttgaacaggaaggatgacgacaagattgctgcaatagtt
agcaatcctcgaagcagcgactttgaggttctgcggacgagtcttctgcctggtattcta
aaagtcatggaacacagcaaagatgttcctcgtccagtgaaggttttcgagatctctgac
gtagttctcctggatcccagtaaggatgtaggagctgcaaattcccgtcatctggctgct
ttgtactgcagcaccacgtctggcttcgaaatcatacacggcctcctggatagaatcatg
aacgttctcaatgttccagtcgacggctacaccgtggggccatccaatgaaccggagctt
ttcaagggtcgtcaagccaagattttctacaaaggctcctgcgttggatcctttggaatt
atccatcctcaggtgctcaagaacttcgacattccggatccttgttcttacattgagatg
gaaatcgaacgctttttgtag
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